RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 A0A1W2PPM0 123 aa8.8□□□□□ -1
NPHP4-204ENST00000460696 GPHB5Q86YW7 130 aa8.8□□□□□ -1
NPHP4-204ENST00000460696 CEND1Q8N111 149 aa8.8□□□□□ -1
NPHP4-204ENST00000460696 RNASE8Q8TDE3 154 aaKnown RBP8.8□□□□□ -1
NPHP4-204ENST00000460696 WDFY3Q8IZQ1 3526 aa8.8□□□□□ -1
NPHP4-204ENST00000460696 ZFAND2AQ8N6M9 145 aa8.8□□□□□ -1
NPHP4-204ENST00000460696 I3L3M4 83 aa8.8□□□□□ -1
NPHP4-204ENST00000460696 TRGV4A0A0C4DH28 118 aa8.79□□□□□ -1
NPHP4-204ENST00000460696 AVPP01185 164 aa8.79□□□□□ -1
NPHP4-204ENST00000460696 SMAGPQ0VAQ4 97 aa8.79□□□□□ -1
NPHP4-204ENST00000460696 K7EMT4 169 aa8.79□□□□□ -1
NPHP4-204ENST00000460696 IGHV4-31P0DP07 118 aa8.79□□□□□ -1
NPHP4-204ENST00000460696 CFHR3Q02985 330 aa8.79□□□□□ -1
NPHP4-204ENST00000460696 ETDBQ3ZM63 59 aa8.79□□□□□ -1
NPHP4-204ENST00000460696 ADAMTSL5Q6ZMM2 481 aa8.79□□□□□ -1
NPHP4-204ENST00000460696 TMEM101Q96IK0 257 aa8.79□□□□□ -1
NPHP4-204ENST00000460696 TRAV13-1A0A0B4J241 112 aa8.78□□□□□ -1
NPHP4-204ENST00000460696 H3BMG7 143 aa8.78□□□□□ -1
NPHP4-204ENST00000460696 K7EP34 96 aa8.78□□□□□ -1
NPHP4-204ENST00000460696 ZFP2Q6ZN57 461 aa8.78□□□□□ -1
NPHP4-204ENST00000460696 FOXI2Q6ZQN5 318 aa8.78□□□□□ -1
NPHP4-204ENST00000460696 IGKV2D-26A0A0A0MRZ7 120 aa8.78□□□□□ -1
NPHP4-204ENST00000460696 ADARB2-AS1A8MUL3 147 aa8.78□□□□□ -1
NPHP4-204ENST00000460696 ZNF625Q96I27 306 aaPredicted RBP8.78□□□□□ -1
NPHP4-204ENST00000460696 RPL36AP83881 106 aaKnown RBP8.78□□□□□ -1
NPHP4-204ENST00000460696 RPL36ALQ969Q0 106 aaKnown RBP8.78□□□□□ -1
NPHP4-204ENST00000460696 TMEM141Q96I45 108 aa8.78□□□□□ -1
NPHP4-204ENST00000460696 TIMM21Q9BVV7 248 aa8.78□□□□□ -1
NPHP4-204ENST00000460696 AGRNO00468 2067 aa8.77□□□□□ -1
NPHP4-204ENST00000460696 C12orf74Q32Q52 190 aa8.77□□□□□ -1.01
NPHP4-204ENST00000460696 RASL10AQ92737 203 aa8.77□□□□□ -1.01
NPHP4-204ENST00000460696 ERG28Q9UKR5 140 aa8.77□□□□□ -1.01
NPHP4-204ENST00000460696 U3KQK5 164 aa8.77□□□□□ -1.01
NPHP4-204ENST00000460696 COL27A1Q8IZC6 1860 aaPredicted RBP8.77□□□□□ -1.01
NPHP4-204ENST00000460696 IGHG4P01861 327 aa8.77□□□□□ -1.01
NPHP4-204ENST00000460696 PLEKHB2Q96CS7 222 aa8.77□□□□□ -1.01
NPHP4-204ENST00000460696 A0A0J9YX75 114 aa8.76□□□□□ -1.01
NPHP4-204ENST00000460696 TMEM238C9JI98 176 aa8.76□□□□□ -1.01
NPHP4-204ENST00000460696 EDN2P20800 178 aa8.76□□□□□ -1.01
NPHP4-204ENST00000460696 MRAPQ8TCY5 172 aa8.76□□□□□ -1.01
NPHP4-204ENST00000460696 A8MWV9 139 aa8.76□□□□□ -1.01
NPHP4-204ENST00000460696 ZNRF2Q8NHG8 242 aa8.76□□□□□ -1.01
NPHP4-204ENST00000460696 BAALCQ8WXS3 180 aa8.76□□□□□ -1.01
NPHP4-204ENST00000460696 J3QQQ9 107 aa8.76□□□□□ -1.01
NPHP4-204ENST00000460696 TMEM61Q8N0U2 210 aa8.76□□□□□ -1.01
NPHP4-204ENST00000460696 CHCHD5Q9BSY4 110 aa8.75□□□□□ -1.01
NPHP4-204ENST00000460696 DLX4Q92988 240 aaPredicted RBP8.75□□□□□ -1.01
NPHP4-204ENST00000460696 OPRPNQ99935 248 aaPredicted RBP8.75□□□□□ -1.01
NPHP4-204ENST00000460696 NOTCH1P46531 2555 aa8.75□□□□□ -1.01
NPHP4-204ENST00000460696 GAGE12JA6NER3 117 aa8.75□□□□□ -1.01
NPHP4-204ENST00000460696 GAGE4Q13068 117 aa8.75□□□□□ -1.01
NPHP4-204ENST00000460696 GAGE5Q13069 117 aa8.75□□□□□ -1.01
NPHP4-204ENST00000460696 A0A0J9YXV3 536 aa8.74□□□□□ -1.01
NPHP4-204ENST00000460696 HTN3P15516 51 aa8.74□□□□□ -1.01
NPHP4-204ENST00000460696 UTP20O75691 2785 aaKnown RBP8.74□□□□□ -1.01
NPHP4-204ENST00000460696 TOMM6Q96B49 74 aa8.74□□□□□ -1.01
NPHP4-204ENST00000460696 GTSF1LQ9H1H1 148 aa8.74□□□□□ -1.01
NPHP4-204ENST00000460696 C11orf86A6NJI1 115 aa8.74□□□□□ -1.01
NPHP4-204ENST00000460696 RHODO00212 210 aa8.74□□□□□ -1.01
NPHP4-204ENST00000460696 AZU1P20160 251 aa8.74□□□□□ -1.01
NPHP4-204ENST00000460696 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.73□□□□□ -1.01
NPHP4-204ENST00000460696 IGKV2-29A2NJV5 120 aaPredicted RBP8.73□□□□□ -1.01
NPHP4-204ENST00000460696 DEFB130BP0DP73 79 aa8.73□□□□□ -1.01
NPHP4-204ENST00000460696 DEFB130AP0DP74 79 aa8.73□□□□□ -1.01
NPHP4-204ENST00000460696 PIFOQ8TCI5 191 aa8.73□□□□□ -1.01
NPHP4-204ENST00000460696 A0A096LNJ9 63 aa8.73□□□□□ -1.01
NPHP4-204ENST00000460696 M0R2P5 195 aa8.73□□□□□ -1.01
NPHP4-204ENST00000460696 C2orf91Q6ZV80 131 aa8.73□□□□□ -1.01
NPHP4-204ENST00000460696 U3KQE9 123 aa8.73□□□□□ -1.01
NPHP4-204ENST00000460696 FGF6P10767 208 aa8.73□□□□□ -1.01
NPHP4-204ENST00000460696 NRACQ8N912 160 aa8.73□□□□□ -1.01
NPHP4-204ENST00000460696 OR13C6PQ8NH95 151 aa8.73□□□□□ -1.01
NPHP4-204ENST00000460696 RELNP78509 3460 aa8.72□□□□□ -1.01
NPHP4-204ENST00000460696 GAGE7O76087 117 aa8.72□□□□□ -1.01
NPHP4-204ENST00000460696 GAGE12FP0CL80 117 aa8.72□□□□□ -1.01
NPHP4-204ENST00000460696 GAGE12GP0CL81 117 aa8.72□□□□□ -1.01
NPHP4-204ENST00000460696 GAGE12IP0CL82 117 aa8.72□□□□□ -1.01
NPHP4-204ENST00000460696 TAL2Q16559 108 aa8.72□□□□□ -1.01
NPHP4-204ENST00000460696 RNASE3P12724 160 aaKnown RBP8.72□□□□□ -1.01
NPHP4-204ENST00000460696 K7EQG2 157 aa8.71□□□□□ -1.01
NPHP4-204ENST00000460696 MED14OSP0DP75 135 aa8.71□□□□□ -1.01
NPHP4-204ENST00000460696 MAPKAPK5-AS1Q8N8E1 139 aa8.71□□□□□ -1.01
NPHP4-204ENST00000460696 TRAV12-1A0A0B4J245 112 aa8.71□□□□□ -1.01
NPHP4-204ENST00000460696 IGLL5B9A064 214 aa8.71□□□□□ -1.01
NPHP4-204ENST00000460696 CCL24O00175 119 aa8.71□□□□□ -1.01
NPHP4-204ENST00000460696 P0DMU3 169 aa8.71□□□□□ -1.01
NPHP4-204ENST00000460696 FAM231AP0DMU4 169 aa8.71□□□□□ -1.01
NPHP4-204ENST00000460696 FAM231CP0DMU5 169 aa8.71□□□□□ -1.01
NPHP4-204ENST00000460696 LRRC75A-AS1Q8N1F1 130 aa8.71□□□□□ -1.01
NPHP4-204ENST00000460696 CNFNQ9BYD5 112 aa8.71□□□□□ -1.01
NPHP4-204ENST00000460696 HIGD1BQ9P298 99 aa8.71□□□□□ -1.02
NPHP4-204ENST00000460696 CRYBG3Q68DQ2 2970 aa8.71□□□□□ -1.02
NPHP4-204ENST00000460696 PSMB8P28062 276 aa8.71□□□□□ -1.02
NPHP4-204ENST00000460696 NDUFA12Q9UI09 145 aa8.71□□□□□ -1.02
NPHP4-204ENST00000460696 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.7□□□□□ -1.02
NPHP4-204ENST00000460696 PRM2P04554 102 aa8.7□□□□□ -1.02
NPHP4-204ENST00000460696 RHOHQ15669 191 aa8.7□□□□□ -1.02
NPHP4-204ENST00000460696 SIGMAR1Q99720 223 aa8.7□□□□□ -1.02
NPHP4-204ENST00000460696 DNAJC9-AS1A6NH13 148 aa8.7□□□□□ -1.02
NPHP4-204ENST00000460696 SPINK8P0C7L1 97 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms