RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 FAM19A2Q8N3H0 131 aa6.19□□□□□ -1.42
RIF1-208ENST00000457745 C16orf74Q96GX8 76 aa6.19□□□□□ -1.42
RIF1-208ENST00000457745 HUWE1Q7Z6Z7 4374 aaKnown RBP6.18□□□□□ -1.42
RIF1-208ENST00000457745 ZNF56Q15929 161 aa6.18□□□□□ -1.42
RIF1-208ENST00000457745 LCE1DQ5T752 114 aa6.18□□□□□ -1.42
RIF1-208ENST00000457745 FAM222AQ5U5X8 452 aa6.18□□□□□ -1.42
RIF1-208ENST00000457745 RNASEKQ6P5S7 137 aaKnown RBP6.18□□□□□ -1.42
RIF1-208ENST00000457745 SPATA12Q7Z6I5 190 aa6.18□□□□□ -1.42
RIF1-208ENST00000457745 NIT1Q86X76 327 aa6.18□□□□□ -1.42
RIF1-208ENST00000457745 ORMDL3Q8N138 153 aa6.18□□□□□ -1.42
RIF1-208ENST00000457745 SYT8Q8NBV8 401 aa6.18□□□□□ -1.42
RIF1-208ENST00000457745 HIST1H2BLQ99880 126 aa6.18□□□□□ -1.42
RIF1-208ENST00000457745 SPXQ9BT56 116 aa6.18□□□□□ -1.42
RIF1-208ENST00000457745 PAX4O43316 350 aa6.17□□□□□ -1.42
RIF1-208ENST00000457745 ESDP10768 282 aa6.17□□□□□ -1.42
RIF1-208ENST00000457745 OR10J3Q5JRS4 329 aa6.17□□□□□ -1.42
RIF1-208ENST00000457745 Q6ZWC4 215 aa6.17□□□□□ -1.42
RIF1-208ENST00000457745 BAGE3Q86Y29 109 aa6.17□□□□□ -1.42
RIF1-208ENST00000457745 MRAPQ8TCY5 172 aa6.17□□□□□ -1.42
RIF1-208ENST00000457745 F5H697 171 aa6.16□□□□□ -1.42
RIF1-208ENST00000457745 TCAPO15273 167 aa6.16□□□□□ -1.42
RIF1-208ENST00000457745 DEFB130BP0DP73 79 aa6.16□□□□□ -1.42
RIF1-208ENST00000457745 DEFB130AP0DP74 79 aa6.16□□□□□ -1.42
RIF1-208ENST00000457745 FABP4P15090 132 aa6.16□□□□□ -1.42
RIF1-208ENST00000457745 PMCHP20382 165 aa6.16□□□□□ -1.42
RIF1-208ENST00000457745 FHL2Q14192 279 aa6.16□□□□□ -1.42
RIF1-208ENST00000457745 MRAP2Q96G30 205 aa6.16□□□□□ -1.42
RIF1-208ENST00000457745 DKK2Q9UBU2 259 aa6.16□□□□□ -1.42
RIF1-208ENST00000457745 DNAH9Q9NYC9 4486 aa6.15□□□□□ -1.42
RIF1-208ENST00000457745 IGHV1-24A0A0C4DH33 117 aa6.15□□□□□ -1.42
RIF1-208ENST00000457745 LINC01546A6NGU7 62 aa6.15□□□□□ -1.42
RIF1-208ENST00000457745 A8MWV9 139 aa6.15□□□□□ -1.42
RIF1-208ENST00000457745 S100A6P06703 90 aa6.15□□□□□ -1.42
RIF1-208ENST00000457745 POLR2KP53803 58 aaKnown RBP6.15□□□□□ -1.42
RIF1-208ENST00000457745 LGALS9BQ3B8N2 356 aa6.15□□□□□ -1.42
RIF1-208ENST00000457745 KRTAP21-3Q3LHN1 58 aa6.15□□□□□ -1.42
RIF1-208ENST00000457745 PIK3CD-AS1Q5SR53 167 aa6.15□□□□□ -1.42
RIF1-208ENST00000457745 Q8N976 141 aa6.15□□□□□ -1.42
RIF1-208ENST00000457745 NEXN-AS1Q8NBZ9 246 aa6.15□□□□□ -1.42
RIF1-208ENST00000457745 OR4C5Q8NGB2 326 aa6.15□□□□□ -1.42
RIF1-208ENST00000457745 SMIM2Q9BVW6 85 aa6.15□□□□□ -1.42
RIF1-208ENST00000457745 TRAV4A0A0B4J268 109 aa6.14□□□□□ -1.43
RIF1-208ENST00000457745 IGHV3-38A0A0C4DH36 116 aa6.14□□□□□ -1.43
RIF1-208ENST00000457745 TRBV6-5A0A0K0K1A5 114 aa6.14□□□□□ -1.43
RIF1-208ENST00000457745 SMIM9A6NGZ8 99 aa6.14□□□□□ -1.43
RIF1-208ENST00000457745 PRSS47A8MTI9 375 aa6.14□□□□□ -1.43
RIF1-208ENST00000457745 SMIM15Q7Z3B0 74 aa6.14□□□□□ -1.43
RIF1-208ENST00000457745 Q8N8P6 123 aa6.14□□□□□ -1.43
RIF1-208ENST00000457745 OR10D4PQ8NGN7 298 aa6.14□□□□□ -1.43
RIF1-208ENST00000457745 TM2D3Q9BRN9 247 aa6.14□□□□□ -1.43
RIF1-208ENST00000457745 TMEM70Q9BUB7 260 aa6.14□□□□□ -1.43
RIF1-208ENST00000457745 MAP1LC3AQ9H492 121 aa6.14□□□□□ -1.43
RIF1-208ENST00000457745 EDA2RQ9HAV5 297 aa6.14□□□□□ -1.43
RIF1-208ENST00000457745 A0A0J9YWU9 116 aa6.13□□□□□ -1.43
RIF1-208ENST00000457745 TSHBP01222 138 aa6.13□□□□□ -1.43
RIF1-208ENST00000457745 PPBPP02775 128 aa6.13□□□□□ -1.43
RIF1-208ENST00000457745 LINC00614P0C842 121 aa6.13□□□□□ -1.43
RIF1-208ENST00000457745 SMIM17P0DL12 118 aa6.13□□□□□ -1.43
RIF1-208ENST00000457745 LINC00694P0DN24 101 aa6.13□□□□□ -1.43
RIF1-208ENST00000457745 MIFP14174 115 aa6.13□□□□□ -1.43
RIF1-208ENST00000457745 SUMO2P61956 95 aaKnown RBP6.13□□□□□ -1.43
RIF1-208ENST00000457745 C12orf74Q32Q52 190 aa6.13□□□□□ -1.43
RIF1-208ENST00000457745 DEFB121Q5J5C9 76 aa6.13□□□□□ -1.43
RIF1-208ENST00000457745 SLC25A29Q8N8R3 303 aa6.13□□□□□ -1.43
RIF1-208ENST00000457745 TRGV2A0A075B6R0 118 aa6.12□□□□□ -1.43
RIF1-208ENST00000457745 SDHAF1A6NFY7 115 aa6.12□□□□□ -1.43
RIF1-208ENST00000457745 AMTP48728 403 aa6.12□□□□□ -1.43
RIF1-208ENST00000457745 ZFP2Q6ZN57 461 aa6.12□□□□□ -1.43
RIF1-208ENST00000457745 PRSS3P2Q8NHM4 247 aa6.12□□□□□ -1.43
RIF1-208ENST00000457745 PHLDA1Q8WV24 401 aaPredicted RBP6.12□□□□□ -1.43
RIF1-208ENST00000457745 FAM104AQ969W3 186 aa6.12□□□□□ -1.43
RIF1-208ENST00000457745 VSIG2Q96IQ7 327 aa6.12□□□□□ -1.43
RIF1-208ENST00000457745 TP53TG1Q9Y2A0 90 aa6.12□□□□□ -1.43
RIF1-208ENST00000457745 GAGE12JA6NER3 117 aa6.11□□□□□ -1.43
RIF1-208ENST00000457745 K7EQD1 137 aa6.11□□□□□ -1.43
RIF1-208ENST00000457745 RHODO00212 210 aa6.11□□□□□ -1.43
RIF1-208ENST00000457745 AKR1D1P51857 326 aa6.11□□□□□ -1.43
RIF1-208ENST00000457745 GAGE1Q13065 139 aa6.11□□□□□ -1.43
RIF1-208ENST00000457745 GAGE4Q13068 117 aa6.11□□□□□ -1.43
RIF1-208ENST00000457745 GAGE5Q13069 117 aa6.11□□□□□ -1.43
RIF1-208ENST00000457745 GAGE13Q4V321 117 aa6.11□□□□□ -1.43
RIF1-208ENST00000457745 PYY3Q5JQD4 70 aa6.11□□□□□ -1.43
RIF1-208ENST00000457745 NTM-AS1Q6ZSK4 140 aa6.11□□□□□ -1.43
RIF1-208ENST00000457745 FA2HQ7L5A8 372 aa6.11□□□□□ -1.43
RIF1-208ENST00000457745 CHCHD1Q96BP2 118 aaKnown RBP6.11□□□□□ -1.43
RIF1-208ENST00000457745 PACRGQ96M98 296 aaPredicted RBP6.11□□□□□ -1.43
RIF1-208ENST00000457745 ST20Q9HBF5 79 aa6.11□□□□□ -1.43
RIF1-208ENST00000457745 NIT2Q9NQR4 276 aa6.11□□□□□ -1.43
RIF1-208ENST00000457745 LAMTOR2Q9Y2Q5 125 aa6.11□□□□□ -1.43
RIF1-208ENST00000457745 A0A0J9YY99 117 aa6.1□□□□□ -1.43
RIF1-208ENST00000457745 LYRM9A8MSI8 78 aa6.1□□□□□ -1.43
RIF1-208ENST00000457745 H3BS24 57 aa6.1□□□□□ -1.43
RIF1-208ENST00000457745 HSBP1O75506 76 aa6.1□□□□□ -1.43
RIF1-208ENST00000457745 C3orf79P0CE67 100 aa6.1□□□□□ -1.43
RIF1-208ENST00000457745 NANOS2P60321 138 aaKnown RBP6.1□□□□□ -1.43
RIF1-208ENST00000457745 RPL39P62891 51 aaKnown RBP6.1□□□□□ -1.43
RIF1-208ENST00000457745 RPL32P62910 135 aaKnown RBP6.1□□□□□ -1.43
RIF1-208ENST00000457745 ZC2HC1BQ5TFG8 222 aa6.1□□□□□ -1.43
RIF1-208ENST00000457745 Q6ZTC4 211 aa6.1□□□□□ -1.43
RIF1-208ENST00000457745 ZNRF2Q8NHG8 242 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms