RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 P0DMU3 169 aa7.53□□□□□ -1.2
CHCHD4P3-201ENST00000455954 FAM231AP0DMU4 169 aa7.53□□□□□ -1.2
CHCHD4P3-201ENST00000455954 FAM231CP0DMU5 169 aa7.53□□□□□ -1.2
CHCHD4P3-201ENST00000455954 S100A4P26447 101 aaKnown RBP7.53□□□□□ -1.2
CHCHD4P3-201ENST00000455954 INSL3P51460 131 aa7.53□□□□□ -1.2
CHCHD4P3-201ENST00000455954 UBE2E1P51965 193 aa7.53□□□□□ -1.2
CHCHD4P3-201ENST00000455954 ATP5G2Q06055 141 aa7.53□□□□□ -1.2
CHCHD4P3-201ENST00000455954 ERG28Q9UKR5 140 aa7.53□□□□□ -1.2
CHCHD4P3-201ENST00000455954 COL6A5A8TX70 2615 aa7.53□□□□□ -1.2
CHCHD4P3-201ENST00000455954 A0A0B4J2C4 111 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 LOC107984156A0A0G2JMH3 177 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 A0A0J9YX75 114 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 IGIPA6NJ69 53 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 H3BUA1 57 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 NDUFA4O00483 81 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 SOCS3O14543 225 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 VCYO14598 125 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 IGHV1-69P01742 117 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 IGHV3-30P01768 117 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 RNASE1P07998 156 aaKnown RBP7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 IGHV3-30-5P0DP03 117 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 POLR2KP53803 58 aaKnown RBP7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 RHOHQ15669 191 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 ECSCRQ19T08 205 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 DEFB112Q30KQ8 113 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 C19orf54Q5BKX5 351 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 PRR9Q5T870 116 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 CLEC19AQ6UXS0 136 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 NFE4Q86UQ8 179 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 GPHB5Q86YW7 130 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 ARL17AQ8IVW1 177 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 PLEKHB2Q96CS7 222 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 CARD19Q96LW7 228 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 DUX5Q96PT3 197 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 PRO1854Q9UHT4 67 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 KIF25-AS1Q9Y6Z4 181 aa7.52□□□□□ -1.21
CHCHD4P3-201ENST00000455954 MXRA5Q9NR99 2828 aa7.51□□□□□ -1.21
CHCHD4P3-201ENST00000455954 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.51□□□□□ -1.21
CHCHD4P3-201ENST00000455954 CRYGDP07320 174 aa7.51□□□□□ -1.21
CHCHD4P3-201ENST00000455954 ZNF876PQ49A33 203 aa7.51□□□□□ -1.21
CHCHD4P3-201ENST00000455954 Q6Q795 121 aa7.51□□□□□ -1.21
CHCHD4P3-201ENST00000455954 Q6YL49 198 aa7.51□□□□□ -1.21
CHCHD4P3-201ENST00000455954 RPL39LQ96EH5 51 aaKnown RBP7.51□□□□□ -1.21
CHCHD4P3-201ENST00000455954 KIR2DL4Q99706 377 aa7.51□□□□□ -1.21
CHCHD4P3-201ENST00000455954 SVEP1Q4LDE5 3571 aa7.51□□□□□ -1.21
CHCHD4P3-201ENST00000455954 TRAV26-1A0A087WT03 109 aa7.5□□□□□ -1.21
CHCHD4P3-201ENST00000455954 LEPROTO15243 131 aa7.5□□□□□ -1.21
CHCHD4P3-201ENST00000455954 TCL1BO95988 128 aa7.5□□□□□ -1.21
CHCHD4P3-201ENST00000455954 MGPP08493 103 aa7.5□□□□□ -1.21
CHCHD4P3-201ENST00000455954 CFC1BP0CG36 223 aa7.5□□□□□ -1.21
CHCHD4P3-201ENST00000455954 CFC1P0CG37 223 aa7.5□□□□□ -1.21
CHCHD4P3-201ENST00000455954 XGP55808 180 aa7.5□□□□□ -1.21
CHCHD4P3-201ENST00000455954 ANXA2RQ3ZCQ2 193 aa7.5□□□□□ -1.21
CHCHD4P3-201ENST00000455954 ZFP2Q6ZN57 461 aa7.5□□□□□ -1.21
CHCHD4P3-201ENST00000455954 C3orf56Q8N813 242 aa7.5□□□□□ -1.21
CHCHD4P3-201ENST00000455954 ODF3Q96PU9 254 aa7.5□□□□□ -1.21
CHCHD4P3-201ENST00000455954 KLK15Q9H2R5 256 aa7.5□□□□□ -1.21
CHCHD4P3-201ENST00000455954 TRBV27A0A0K0K1C4 114 aa7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 SDHAF1A6NFY7 115 aa7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 LGALS9O00182 355 aa7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 DUSP14O95147 198 aaKnown RBP7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 TSHBP01222 138 aa7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 MT-ATP8P03928 68 aa7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 LGALS3P17931 250 aaKnown RBP7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 LINC00315P59091 139 aa7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 MRPL23Q16540 153 aaKnown RBP7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 NSUN5P1Q3KNT7 163 aa7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 ZFAND6Q6FIF0 208 aa7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 TMEM86BQ8N661 226 aa7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 C14orf178Q8N769 122 aaPredicted RBP7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 AJUBAQ96IF1 538 aa7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 C20orf173Q96LM9 149 aa7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 AMELXQ99217 191 aa7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 CITED1Q99966 193 aa7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 TP53TG1Q9Y2A0 90 aa7.49□□□□□ -1.21
CHCHD4P3-201ENST00000455954 IGHV3OR16-8A0A075B7F1 116 aa7.48□□□□□ -1.21
CHCHD4P3-201ENST00000455954 IGHV3-35A0A0C4DH35 117 aa7.48□□□□□ -1.21
CHCHD4P3-201ENST00000455954 IGHV3-66A0A0C4DH42 116 aa7.48□□□□□ -1.21
CHCHD4P3-201ENST00000455954 J3QQQ9 107 aa7.48□□□□□ -1.21
CHCHD4P3-201ENST00000455954 NPFFO15130 113 aa7.48□□□□□ -1.21
CHCHD4P3-201ENST00000455954 SCGB1C2P0DMR2 95 aa7.48□□□□□ -1.21
CHCHD4P3-201ENST00000455954 RNASE3P12724 160 aaKnown RBP7.48□□□□□ -1.21
CHCHD4P3-201ENST00000455954 ARL3P36405 182 aa7.48□□□□□ -1.21
CHCHD4P3-201ENST00000455954 RPL13AP40429 203 aaKnown RBP7.48□□□□□ -1.21
CHCHD4P3-201ENST00000455954 ANKRD29Q8N6D5 301 aa7.48□□□□□ -1.21
CHCHD4P3-201ENST00000455954 C5orf56Q8N8D9 126 aa7.48□□□□□ -1.21
CHCHD4P3-201ENST00000455954 USMG5Q96IX5 58 aa7.48□□□□□ -1.21
CHCHD4P3-201ENST00000455954 CLUHP3Q96NS8 147 aa7.48□□□□□ -1.21
CHCHD4P3-201ENST00000455954 MOB4Q9Y3A3 225 aa7.48□□□□□ -1.21
CHCHD4P3-201ENST00000455954 TRAV41A0A0B4J266 112 aa7.47□□□□□ -1.21
CHCHD4P3-201ENST00000455954 KLLNB2CW77 178 aa7.47□□□□□ -1.21
CHCHD4P3-201ENST00000455954 SLC25A20O43772 301 aa7.47□□□□□ -1.21
CHCHD4P3-201ENST00000455954 IGHV3-33P01772 117 aa7.47□□□□□ -1.21
CHCHD4P3-201ENST00000455954 FHL3Q13643 280 aa7.47□□□□□ -1.21
CHCHD4P3-201ENST00000455954 ATXN8Q156A1 80 aa7.47□□□□□ -1.21
CHCHD4P3-201ENST00000455954 TMEM263Q8WUH6 116 aaKnown RBP7.47□□□□□ -1.21
CHCHD4P3-201ENST00000455954 MDFICQ9P1T7 246 aa7.47□□□□□ -1.21
CHCHD4P3-201ENST00000455954 TMEM223A0PJW6 202 aa7.46□□□□□ -1.22
CHCHD4P3-201ENST00000455954 IGHV4-59P01825 116 aa7.46□□□□□ -1.22
CHCHD4P3-201ENST00000455954 RNASE4P34096 147 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms