RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 PRSS3P2Q8NHM4 247 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 PACRGQ96M98 296 aaPredicted RBP4.26□□□□□ -1.73
SDC4P-201ENST00000453285 C18orf15Q96N68 181 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 C20orf78Q9BR46 151 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 MAP1LC3AQ9H492 121 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 RETNQ9HD89 108 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 NIT2Q9NQR4 276 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 DKK2Q9UBU2 259 aa4.26□□□□□ -1.73
SDC4P-201ENST00000453285 IGHV1-24A0A0C4DH33 117 aa4.25□□□□□ -1.73
SDC4P-201ENST00000453285 LYRM9A8MSI8 78 aa4.25□□□□□ -1.73
SDC4P-201ENST00000453285 DEFB4AO15263 64 aa4.25□□□□□ -1.73
SDC4P-201ENST00000453285 CIDEAO60543 219 aa4.25□□□□□ -1.73
SDC4P-201ENST00000453285 HSBP1O75506 76 aa4.25□□□□□ -1.73
SDC4P-201ENST00000453285 PPP1R17O96001 155 aa4.25□□□□□ -1.73
SDC4P-201ENST00000453285 FABP4P15090 132 aa4.25□□□□□ -1.73
SDC4P-201ENST00000453285 S100A2P29034 98 aa4.25□□□□□ -1.73
SDC4P-201ENST00000453285 SUMO2P61956 95 aaKnown RBP4.25□□□□□ -1.73
SDC4P-201ENST00000453285 FHL2Q14192 279 aa4.25□□□□□ -1.73
SDC4P-201ENST00000453285 FAM222AQ5U5X8 452 aa4.25□□□□□ -1.73
SDC4P-201ENST00000453285 RNASEKQ6P5S7 137 aaKnown RBP4.25□□□□□ -1.73
SDC4P-201ENST00000453285 FA2HQ7L5A8 372 aa4.25□□□□□ -1.73
SDC4P-201ENST00000453285 TMEM18Q96B42 140 aa4.25□□□□□ -1.73
SDC4P-201ENST00000453285 TMEM70Q9BUB7 260 aa4.25□□□□□ -1.73
SDC4P-201ENST00000453285 SMIM2Q9BVW6 85 aa4.25□□□□□ -1.73
SDC4P-201ENST00000453285 ST20Q9HBF5 79 aa4.25□□□□□ -1.73
SDC4P-201ENST00000453285 NXT2Q9NPJ8 142 aaKnown RBP4.25□□□□□ -1.73
SDC4P-201ENST00000453285 CELA1Q9UNI1 258 aa4.25□□□□□ -1.73
SDC4P-201ENST00000453285 TRGV2A0A075B6R0 118 aa4.24□□□□□ -1.73
SDC4P-201ENST00000453285 TRBV27A0A0K0K1C4 114 aa4.24□□□□□ -1.73
SDC4P-201ENST00000453285 SDHAF1A6NFY7 115 aa4.24□□□□□ -1.73
SDC4P-201ENST00000453285 H7C1H1 209 aa4.24□□□□□ -1.73
SDC4P-201ENST00000453285 TCAPO15273 167 aa4.24□□□□□ -1.73
SDC4P-201ENST00000453285 PMCHP20382 165 aa4.24□□□□□ -1.73
SDC4P-201ENST00000453285 AMTP48728 403 aa4.24□□□□□ -1.73
SDC4P-201ENST00000453285 PMCHL1Q16048 86 aa4.24□□□□□ -1.73
SDC4P-201ENST00000453285 NEXN-AS1Q8NBZ9 246 aa4.24□□□□□ -1.73
SDC4P-201ENST00000453285 OR10D4PQ8NGN7 298 aa4.24□□□□□ -1.73
SDC4P-201ENST00000453285 DNAJC30Q96LL9 226 aa4.24□□□□□ -1.73
SDC4P-201ENST00000453285 TM2D3Q9BRN9 247 aa4.24□□□□□ -1.73
SDC4P-201ENST00000453285 AP5S1Q9NUS5 200 aa4.24□□□□□ -1.73
SDC4P-201ENST00000453285 HUWE1Q7Z6Z7 4374 aaKnown RBP4.24□□□□□ -1.73
SDC4P-201ENST00000453285 TRBV6-4A0A1B0GX49 114 aa4.23□□□□□ -1.73
SDC4P-201ENST00000453285 VCYO14598 125 aa4.23□□□□□ -1.73
SDC4P-201ENST00000453285 SPART-AS1P0CW21 52 aa4.23□□□□□ -1.73
SDC4P-201ENST00000453285 DEFB130BP0DP73 79 aa4.23□□□□□ -1.73
SDC4P-201ENST00000453285 DEFB130AP0DP74 79 aa4.23□□□□□ -1.73
SDC4P-201ENST00000453285 FCER1GP30273 86 aa4.23□□□□□ -1.73
SDC4P-201ENST00000453285 LAGE3Q14657 143 aa4.23□□□□□ -1.73
SDC4P-201ENST00000453285 DEFB121Q5J5C9 76 aa4.23□□□□□ -1.73
SDC4P-201ENST00000453285 LINC00173Q6ZV60 143 aa4.23□□□□□ -1.73
SDC4P-201ENST00000453285 NEGR1Q7Z3B1 354 aa4.23□□□□□ -1.73
SDC4P-201ENST00000453285 SLC25A29Q8N8R3 303 aa4.23□□□□□ -1.73
SDC4P-201ENST00000453285 DNAH9Q9NYC9 4486 aa4.23□□□□□ -1.73
SDC4P-201ENST00000453285 COL7A1Q02388 2944 aa4.22□□□□□ -1.73
SDC4P-201ENST00000453285 TRGV4A0A0C4DH28 118 aa4.22□□□□□ -1.73
SDC4P-201ENST00000453285 TRBV10-1A0A0K0K1A3 114 aa4.22□□□□□ -1.73
SDC4P-201ENST00000453285 LOC100131303A0A0U1RQF7 123 aa4.22□□□□□ -1.73
SDC4P-201ENST00000453285 K7EMI3 77 aa4.22□□□□□ -1.73
SDC4P-201ENST00000453285 K7EQD1 137 aa4.22□□□□□ -1.73
SDC4P-201ENST00000453285 TSHBP01222 138 aa4.22□□□□□ -1.73
SDC4P-201ENST00000453285 LINC00694P0DN24 101 aa4.22□□□□□ -1.73
SDC4P-201ENST00000453285 AKR1D1P51857 326 aa4.22□□□□□ -1.73
SDC4P-201ENST00000453285 CRYBA4P53673 196 aa4.22□□□□□ -1.73
SDC4P-201ENST00000453285 C12orf74Q32Q52 190 aa4.22□□□□□ -1.73
SDC4P-201ENST00000453285 PYY3Q5JQD4 70 aa4.22□□□□□ -1.73
SDC4P-201ENST00000453285 Q8N976 141 aa4.22□□□□□ -1.73
SDC4P-201ENST00000453285 ZNRF2Q8NHG8 242 aa4.22□□□□□ -1.73
SDC4P-201ENST00000453285 DEFB104AQ8WTQ1 72 aa4.22□□□□□ -1.73
SDC4P-201ENST00000453285 C11orf68Q9H3H3 251 aaKnown RBP4.22□□□□□ -1.73
SDC4P-201ENST00000453285 TNFRSF18Q9Y5U5 241 aa4.22□□□□□ -1.73
SDC4P-201ENST00000453285 TRBV7-3A0A075B6L6 115 aa4.21□□□□□ -1.74
SDC4P-201ENST00000453285 I3L3M4 83 aa4.21□□□□□ -1.74
SDC4P-201ENST00000453285 LEPROTL1O95214 131 aa4.21□□□□□ -1.74
SDC4P-201ENST00000453285 HBDP02042 147 aa4.21□□□□□ -1.74
SDC4P-201ENST00000453285 C3orf79P0CE67 100 aa4.21□□□□□ -1.74
SDC4P-201ENST00000453285 UBE2D3P61077 147 aa4.21□□□□□ -1.74
SDC4P-201ENST00000453285 DAD1P61803 113 aa4.21□□□□□ -1.74
SDC4P-201ENST00000453285 UBE2D2P62837 147 aa4.21□□□□□ -1.74
SDC4P-201ENST00000453285 JOSD1Q15040 202 aaPredicted RBP4.21□□□□□ -1.74
SDC4P-201ENST00000453285 ORMDL2Q53FV1 153 aa4.21□□□□□ -1.74
SDC4P-201ENST00000453285 SPATA12Q7Z6I5 190 aa4.21□□□□□ -1.74
SDC4P-201ENST00000453285 MRAPQ8TCY5 172 aa4.21□□□□□ -1.74
SDC4P-201ENST00000453285 VSIG2Q96IQ7 327 aa4.21□□□□□ -1.74
SDC4P-201ENST00000453285 SPATA25Q9BR10 227 aa4.21□□□□□ -1.74
SDC4P-201ENST00000453285 HHLA3Q9XRX5 114 aa4.21□□□□□ -1.74
SDC4P-201ENST00000453285 IGHV3-38A0A0C4DH36 116 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 A0A0J9YWU9 116 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 TEX48A0A1B0GUV7 120 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 GAGE12JA6NER3 117 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 NUDT3O95989 172 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 ATP5G1P05496 136 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 RPL36AP83881 106 aaKnown RBP4.2□□□□□ -1.74
SDC4P-201ENST00000453285 GAGE1Q13065 139 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 GAGE4Q13068 117 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 GAGE5Q13069 117 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 RHOHQ15669 191 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 GAGE13Q4V321 117 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 CDPF1Q6NVV7 123 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 NTM-AS1Q6ZSK4 140 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 PHLDA1Q8WV24 401 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms