RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 VCYO14598 125 aa8.62□□□□□ -1.03
VTA1-203ENST00000452973 POLR2KP53803 58 aaKnown RBP8.62□□□□□ -1.03
VTA1-203ENST00000452973 BVES-AS1Q5T3Y7 98 aa8.62□□□□□ -1.03
VTA1-203ENST00000452973 ZFP2Q6ZN57 461 aa8.62□□□□□ -1.03
VTA1-203ENST00000452973 POM121L12Q8N7R1 296 aa8.62□□□□□ -1.03
VTA1-203ENST00000452973 TRAV8-6A0A0B4J262 113 aa8.61□□□□□ -1.03
VTA1-203ENST00000452973 TMEM238LA0A1B0GVL6 79 aa8.61□□□□□ -1.03
VTA1-203ENST00000452973 MRPL16Q9NX20 251 aaKnown RBP8.61□□□□□ -1.03
VTA1-203ENST00000452973 CYSLTR1Q9Y271 337 aa8.61□□□□□ -1.03
VTA1-203ENST00000452973 INSP01308 110 aa8.61□□□□□ -1.03
VTA1-203ENST00000452973 MORN3Q6PF18 240 aaPredicted RBP8.61□□□□□ -1.03
VTA1-203ENST00000452973 ZMAT4Q9H898 229 aa8.61□□□□□ -1.03
VTA1-203ENST00000452973 CHTOPQ9Y3Y2 248 aaKnown RBP8.61□□□□□ -1.03
VTA1-203ENST00000452973 C12orf54Q6X4T0 127 aa8.61□□□□□ -1.03
VTA1-203ENST00000452973 BOD1L2Q8IYS8 172 aa8.61□□□□□ -1.03
VTA1-203ENST00000452973 BAALCQ8WXS3 180 aa8.61□□□□□ -1.03
VTA1-203ENST00000452973 C16orf95Q9H693 158 aa8.61□□□□□ -1.03
VTA1-203ENST00000452973 INAFM1C9JVW0 142 aa8.6□□□□□ -1.03
VTA1-203ENST00000452973 AZU1P20160 251 aa8.6□□□□□ -1.03
VTA1-203ENST00000452973 Q9UF83 564 aa8.6□□□□□ -1.03
VTA1-203ENST00000452973 H7C1H1 209 aa8.6□□□□□ -1.03
VTA1-203ENST00000452973 FLNBO75369 2602 aaKnown RBP8.59□□□□□ -1.03
VTA1-203ENST00000452973 PRSS29PA6NIE9 313 aa8.59□□□□□ -1.03
VTA1-203ENST00000452973 ZNF415Q09FC8 603 aa8.59□□□□□ -1.03
VTA1-203ENST00000452973 F8VRH5 84 aa8.59□□□□□ -1.03
VTA1-203ENST00000452973 RPL35AP18077 110 aaKnown RBP8.59□□□□□ -1.03
VTA1-203ENST00000452973 TRPT1Q86TN4 253 aaKnown RBP8.59□□□□□ -1.03
VTA1-203ENST00000452973 K7EMI3 77 aa8.59□□□□□ -1.04
VTA1-203ENST00000452973 M0R2P5 195 aa8.59□□□□□ -1.04
VTA1-203ENST00000452973 NPSP0C0P6 89 aa8.59□□□□□ -1.04
VTA1-203ENST00000452973 NEXN-AS1Q8NBZ9 246 aa8.59□□□□□ -1.04
VTA1-203ENST00000452973 OPRPNQ99935 248 aaPredicted RBP8.59□□□□□ -1.04
VTA1-203ENST00000452973 HIVEP1P15822 2718 aa8.58□□□□□ -1.04
VTA1-203ENST00000452973 NSD1Q96L73 2696 aaPredicted RBP8.58□□□□□ -1.04
VTA1-203ENST00000452973 TRAV25A0A0B4J276 109 aa8.58□□□□□ -1.04
VTA1-203ENST00000452973 A8MTW9 85 aa8.58□□□□□ -1.04
VTA1-203ENST00000452973 TMEM97Q5BJF2 176 aa8.58□□□□□ -1.04
VTA1-203ENST00000452973 TRBV27A0A0K0K1C4 114 aa8.58□□□□□ -1.04
VTA1-203ENST00000452973 PLNP26678 52 aa8.58□□□□□ -1.04
VTA1-203ENST00000452973 Q6ZSN1 163 aa8.57□□□□□ -1.04
VTA1-203ENST00000452973 DLEU1O43261 78 aa8.57□□□□□ -1.04
VTA1-203ENST00000452973 TSHBP01222 138 aa8.57□□□□□ -1.04
VTA1-203ENST00000452973 VWFP04275 2813 aa8.57□□□□□ -1.04
VTA1-203ENST00000452973 ADARB2-AS1A8MUL3 147 aa8.57□□□□□ -1.04
VTA1-203ENST00000452973 C1orf158Q8N1D5 194 aa8.57□□□□□ -1.04
VTA1-203ENST00000452973 TRBV6-5A0A0K0K1A5 114 aa8.56□□□□□ -1.04
VTA1-203ENST00000452973 PF4P02776 101 aa8.56□□□□□ -1.04
VTA1-203ENST00000452973 KRTAP10-3P60369 221 aa8.56□□□□□ -1.04
VTA1-203ENST00000452973 MAPKAPK5-AS1Q8N8E1 139 aa8.56□□□□□ -1.04
VTA1-203ENST00000452973 C11orf72Q8NBR9 251 aa8.56□□□□□ -1.04
VTA1-203ENST00000452973 COX11Q9Y6N1 276 aa8.56□□□□□ -1.04
VTA1-203ENST00000452973 TRGV1A0A0A0MS02 117 aa8.56□□□□□ -1.04
VTA1-203ENST00000452973 TRAV12-1A0A0B4J245 112 aa8.56□□□□□ -1.04
VTA1-203ENST00000452973 CFAP126Q5VTH2 177 aa8.56□□□□□ -1.04
VTA1-203ENST00000452973 TNFRSF18Q9Y5U5 241 aa8.56□□□□□ -1.04
VTA1-203ENST00000452973 ATRQ13535 2644 aa8.56□□□□□ -1.04
VTA1-203ENST00000452973 A8MWV9 139 aa8.55□□□□□ -1.04
VTA1-203ENST00000452973 I3L3M4 83 aa8.55□□□□□ -1.04
VTA1-203ENST00000452973 IGHV3-53P01767 116 aa8.55□□□□□ -1.04
VTA1-203ENST00000452973 JMJD8Q96S16 334 aa8.55□□□□□ -1.04
VTA1-203ENST00000452973 TENM1Q9UKZ4 2725 aa8.55□□□□□ -1.04
VTA1-203ENST00000452973 IGHV3-38A0A0C4DH36 116 aa8.55□□□□□ -1.04
VTA1-203ENST00000452973 IGIPA6NJ69 53 aa8.55□□□□□ -1.04
VTA1-203ENST00000452973 TRBV25-1A0A075B6N4 114 aa8.55□□□□□ -1.04
VTA1-203ENST00000452973 K7EP13 123 aa8.55□□□□□ -1.04
VTA1-203ENST00000452973 GCSHP23434 173 aa8.55□□□□□ -1.04
VTA1-203ENST00000452973 RPL32P62910 135 aaKnown RBP8.55□□□□□ -1.04
VTA1-203ENST00000452973 PHLDA1Q8WV24 401 aaPredicted RBP8.55□□□□□ -1.04
VTA1-203ENST00000452973 IGLV1-51P01701 117 aa8.54□□□□□ -1.04
VTA1-203ENST00000452973 VAMP3Q15836 100 aa8.54□□□□□ -1.04
VTA1-203ENST00000452973 NAA38Q9BRA0 125 aaKnown RBP8.54□□□□□ -1.04
VTA1-203ENST00000452973 TAX1BP3O14907 124 aa8.54□□□□□ -1.04
VTA1-203ENST00000452973 RAB37Q96AX2 223 aa8.54□□□□□ -1.04
VTA1-203ENST00000452973 NBEAL2Q6ZNJ1 2754 aa8.54□□□□□ -1.04
VTA1-203ENST00000452973 PMVKQ15126 192 aa8.53□□□□□ -1.04
VTA1-203ENST00000452973 CEMP1Q6PRD7 247 aaPredicted RBP8.53□□□□□ -1.04
VTA1-203ENST00000452973 C11orf86A6NJI1 115 aa8.53□□□□□ -1.04
VTA1-203ENST00000452973 NDUFA7O95182 113 aa8.53□□□□□ -1.04
VTA1-203ENST00000452973 TMEM170BQ5T4T1 132 aa8.53□□□□□ -1.04
VTA1-203ENST00000452973 OR11H2Q8NH07 326 aa8.53□□□□□ -1.04
VTA1-203ENST00000452973 ORAOV1Q8WV07 137 aa8.53□□□□□ -1.04
VTA1-203ENST00000452973 CHAC1Q9BUX1 264 aa8.53□□□□□ -1.04
VTA1-203ENST00000452973 HSD52Q0P140 79 aa8.53□□□□□ -1.04
VTA1-203ENST00000452973 RNASE13Q5GAN3 156 aaKnown RBP8.53□□□□□ -1.04
VTA1-203ENST00000452973 CST9LQ9H4G1 147 aa8.53□□□□□ -1.04
VTA1-203ENST00000452973 PTTG1IPP53801 180 aa8.52□□□□□ -1.05
VTA1-203ENST00000452973 RIPPLY3P57055 190 aa8.52□□□□□ -1.05
VTA1-203ENST00000452973 Q6ZTI0 123 aa8.52□□□□□ -1.05
VTA1-203ENST00000452973 C20orf203Q8NBC4 194 aa8.52□□□□□ -1.05
VTA1-203ENST00000452973 OR4C5Q8NGB2 326 aa8.52□□□□□ -1.05
VTA1-203ENST00000452973 SPXQ9BT56 116 aa8.52□□□□□ -1.05
VTA1-203ENST00000452973 NOP10Q9NPE3 64 aaKnown RBP8.52□□□□□ -1.05
VTA1-203ENST00000452973 SIVA1O15304 175 aa8.51□□□□□ -1.05
VTA1-203ENST00000452973 TMEM141Q96I45 108 aa8.51□□□□□ -1.05
VTA1-203ENST00000452973 PRADC1Q9BSG0 188 aa8.51□□□□□ -1.05
VTA1-203ENST00000452973 UFSP1Q6NVU6 142 aa8.51□□□□□ -1.05
VTA1-203ENST00000452973 ZNF479Q96JC4 524 aa8.51□□□□□ -1.05
VTA1-203ENST00000452973 TIMM17AQ99595 171 aa8.51□□□□□ -1.05
VTA1-203ENST00000452973 IGLV4-69A0A075B6H9 119 aa8.51□□□□□ -1.05
VTA1-203ENST00000452973 RHOHQ15669 191 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms