RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 LGALS9BQ3B8N2 356 aa7.7□□□□□ -1.18
VIPAS39-203ENST00000448935 LGALS9CQ6DKI2 356 aa7.7□□□□□ -1.18
VIPAS39-203ENST00000448935 GTSCR1Q86UQ5 136 aa7.7□□□□□ -1.18
VIPAS39-203ENST00000448935 RPL39LQ96EH5 51 aaKnown RBP7.7□□□□□ -1.18
VIPAS39-203ENST00000448935 JPT2Q9H910 190 aa7.7□□□□□ -1.18
VIPAS39-203ENST00000448935 EDA2RQ9HAV5 297 aa7.7□□□□□ -1.18
VIPAS39-203ENST00000448935 VCYO14598 125 aa7.7□□□□□ -1.18
VIPAS39-203ENST00000448935 C11orf72Q8NBR9 251 aa7.7□□□□□ -1.18
VIPAS39-203ENST00000448935 MIEN1Q9BRT3 115 aa7.7□□□□□ -1.18
VIPAS39-203ENST00000448935 H0Y8G0 127 aa7.69□□□□□ -1.18
VIPAS39-203ENST00000448935 C1orf158Q8N1D5 194 aa7.69□□□□□ -1.18
VIPAS39-203ENST00000448935 KIR2DL4Q99706 377 aa7.69□□□□□ -1.18
VIPAS39-203ENST00000448935 CSTL1Q9H114 145 aa7.69□□□□□ -1.18
VIPAS39-203ENST00000448935 NSD1Q96L73 2696 aaPredicted RBP7.69□□□□□ -1.18
VIPAS39-203ENST00000448935 FN1P02751 2386 aaKnown RBP7.68□□□□□ -1.18
VIPAS39-203ENST00000448935 M0QY20 66 aa7.68□□□□□ -1.18
VIPAS39-203ENST00000448935 POLR2KP53803 58 aaKnown RBP7.68□□□□□ -1.18
VIPAS39-203ENST00000448935 ATOH7Q8N100 152 aa7.68□□□□□ -1.18
VIPAS39-203ENST00000448935 TMEM263Q8WUH6 116 aaKnown RBP7.68□□□□□ -1.18
VIPAS39-203ENST00000448935 UQCR10Q9UDW1 63 aa7.68□□□□□ -1.18
VIPAS39-203ENST00000448935 IGHV3OR16-12A0A075B7B8 117 aa7.67□□□□□ -1.18
VIPAS39-203ENST00000448935 TRBV27A0A0K0K1C4 114 aa7.67□□□□□ -1.18
VIPAS39-203ENST00000448935 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.67□□□□□ -1.18
VIPAS39-203ENST00000448935 PRSS1P07477 247 aa7.67□□□□□ -1.18
VIPAS39-203ENST00000448935 C16orf74Q96GX8 76 aa7.67□□□□□ -1.18
VIPAS39-203ENST00000448935 SDHAF1A6NFY7 115 aa7.67□□□□□ -1.18
VIPAS39-203ENST00000448935 RNASE8Q8TDE3 154 aaKnown RBP7.67□□□□□ -1.18
VIPAS39-203ENST00000448935 TOMM6Q96B49 74 aa7.67□□□□□ -1.18
VIPAS39-203ENST00000448935 C18orf15Q96N68 181 aa7.67□□□□□ -1.18
VIPAS39-203ENST00000448935 CUBNO60494 3623 aa7.66□□□□□ -1.18
VIPAS39-203ENST00000448935 NIPBLQ6KC79 2804 aaeCLIP7.66□□□□□ -1.18
VIPAS39-203ENST00000448935 RS1O15537 224 aa7.66□□□□□ -1.18
VIPAS39-203ENST00000448935 IGLC3P0DOY3 106 aa7.66□□□□□ -1.18
VIPAS39-203ENST00000448935 RPL35AP18077 110 aaKnown RBP7.66□□□□□ -1.18
VIPAS39-203ENST00000448935 ZFP2Q6ZN57 461 aa7.66□□□□□ -1.18
VIPAS39-203ENST00000448935 Q6ZN92 141 aa7.66□□□□□ -1.18
VIPAS39-203ENST00000448935 MRPL52Q86TS9 123 aaKnown RBP7.66□□□□□ -1.18
VIPAS39-203ENST00000448935 IL17DQ8TAD2 202 aa7.66□□□□□ -1.18
VIPAS39-203ENST00000448935 SCGB3A1Q96QR1 104 aa7.66□□□□□ -1.18
VIPAS39-203ENST00000448935 IGLL1P15814 213 aa7.65□□□□□ -1.18
VIPAS39-203ENST00000448935 RHOHQ15669 191 aa7.65□□□□□ -1.18
VIPAS39-203ENST00000448935 CFAP126Q5VTH2 177 aa7.65□□□□□ -1.18
VIPAS39-203ENST00000448935 UFSP1Q6NVU6 142 aa7.65□□□□□ -1.18
VIPAS39-203ENST00000448935 C2orf66Q6UXQ4 117 aa7.65□□□□□ -1.18
VIPAS39-203ENST00000448935 DNAJC30Q96LL9 226 aa7.65□□□□□ -1.18
VIPAS39-203ENST00000448935 WFDC10AQ9H1F0 79 aa7.65□□□□□ -1.18
VIPAS39-203ENST00000448935 CYSLTR1Q9Y271 337 aa7.65□□□□□ -1.18
VIPAS39-203ENST00000448935 I3L3M4 83 aa7.64□□□□□ -1.19
VIPAS39-203ENST00000448935 CIDEAO60543 219 aa7.64□□□□□ -1.19
VIPAS39-203ENST00000448935 PRM2P04554 102 aa7.64□□□□□ -1.19
VIPAS39-203ENST00000448935 GIG44P09565 113 aaPredicted RBP7.64□□□□□ -1.19
VIPAS39-203ENST00000448935 AZU1P20160 251 aa7.64□□□□□ -1.19
VIPAS39-203ENST00000448935 DAZ2Q13117 558 aaKnown RBP7.64□□□□□ -1.19
VIPAS39-203ENST00000448935 RRN3P1Q2M238 152 aa7.64□□□□□ -1.19
VIPAS39-203ENST00000448935 GAGE13Q4V321 117 aa7.64□□□□□ -1.19
VIPAS39-203ENST00000448935 ERASQ7Z444 233 aa7.64□□□□□ -1.19
VIPAS39-203ENST00000448935 WFDC9Q8NEX5 89 aa7.64□□□□□ -1.19
VIPAS39-203ENST00000448935 C14orf144Q96I85 54 aa7.64□□□□□ -1.19
VIPAS39-203ENST00000448935 MRPL16Q9NX20 251 aaKnown RBP7.64□□□□□ -1.19
VIPAS39-203ENST00000448935 TNFRSF18Q9Y5U5 241 aa7.64□□□□□ -1.19
VIPAS39-203ENST00000448935 TRAV12-1A0A0B4J245 112 aa7.63□□□□□ -1.19
VIPAS39-203ENST00000448935 IGHV3-53P01767 116 aa7.63□□□□□ -1.19
VIPAS39-203ENST00000448935 LBHQ53QV2 105 aaPredicted RBP7.63□□□□□ -1.19
VIPAS39-203ENST00000448935 CSNK1G2-AS1Q8NCQ2 148 aa7.63□□□□□ -1.19
VIPAS39-203ENST00000448935 PMCHL2Q9BQD1 86 aa7.63□□□□□ -1.19
VIPAS39-203ENST00000448935 TRGV1A0A0A0MS02 117 aa7.63□□□□□ -1.19
VIPAS39-203ENST00000448935 hDV102S1A0JD36 115 aa7.63□□□□□ -1.19
VIPAS39-203ENST00000448935 MAJINQ3KP22 176 aa7.63□□□□□ -1.19
VIPAS39-203ENST00000448935 OR4C5Q8NGB2 326 aa7.63□□□□□ -1.19
VIPAS39-203ENST00000448935 A0A087WX48 190 aa7.62□□□□□ -1.19
VIPAS39-203ENST00000448935 TRAV4A0A0B4J268 109 aa7.62□□□□□ -1.19
VIPAS39-203ENST00000448935 DPM2O94777 84 aa7.62□□□□□ -1.19
VIPAS39-203ENST00000448935 IGKCP01834 107 aa7.62□□□□□ -1.19
VIPAS39-203ENST00000448935 PLNP26678 52 aa7.62□□□□□ -1.19
VIPAS39-203ENST00000448935 HNRNPA3P51991 378 aaKnown RBP7.62□□□□□ -1.19
VIPAS39-203ENST00000448935 TMEM141Q96I45 108 aa7.62□□□□□ -1.19
VIPAS39-203ENST00000448935 TIMM17AQ99595 171 aa7.62□□□□□ -1.19
VIPAS39-203ENST00000448935 IGHV3-73A0A0B4J1V6 119 aa7.61□□□□□ -1.19
VIPAS39-203ENST00000448935 SMIM9A6NGZ8 99 aa7.61□□□□□ -1.19
VIPAS39-203ENST00000448935 M0R143 59 aa7.61□□□□□ -1.19
VIPAS39-203ENST00000448935 SLC25A34Q6PIV7 304 aa7.61□□□□□ -1.19
VIPAS39-203ENST00000448935 NEGR1Q7Z3B1 354 aa7.61□□□□□ -1.19
VIPAS39-203ENST00000448935 KIR2DL5BQ8NHK3 375 aa7.61□□□□□ -1.19
VIPAS39-203ENST00000448935 OVOL2Q9BRP0 275 aa7.61□□□□□ -1.19
VIPAS39-203ENST00000448935 TP53TG1Q9Y2A0 90 aa7.61□□□□□ -1.19
VIPAS39-203ENST00000448935 FBN3Q75N90 2809 aa7.61□□□□□ -1.19
VIPAS39-203ENST00000448935 TRBV10-1A0A0K0K1A3 114 aa7.6□□□□□ -1.19
VIPAS39-203ENST00000448935 NACAE9PAV3 2078 aa7.6□□□□□ -1.19
VIPAS39-203ENST00000448935 APOC4P55056 127 aa7.6□□□□□ -1.19
VIPAS39-203ENST00000448935 DKK2Q9UBU2 259 aa7.6□□□□□ -1.19
VIPAS39-203ENST00000448935 F8VRH5 84 aa7.6□□□□□ -1.19
VIPAS39-203ENST00000448935 TSHBP01222 138 aa7.6□□□□□ -1.19
VIPAS39-203ENST00000448935 KRTAP24-1Q3LI83 254 aa7.6□□□□□ -1.19
VIPAS39-203ENST00000448935 PAPPA-AS1Q5QFB9 102 aa7.6□□□□□ -1.19
VIPAS39-203ENST00000448935 NEXN-AS1Q8NBZ9 246 aa7.6□□□□□ -1.19
VIPAS39-203ENST00000448935 NOP10Q9NPE3 64 aaKnown RBP7.6□□□□□ -1.19
VIPAS39-203ENST00000448935 MRPS16Q9Y3D3 137 aaKnown RBP7.6□□□□□ -1.19
VIPAS39-203ENST00000448935 B5MCH6 92 aa7.59□□□□□ -1.19
VIPAS39-203ENST00000448935 COX8AP10176 69 aa7.59□□□□□ -1.19
VIPAS39-203ENST00000448935 Q6ZTI0 123 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms