RNA–Protein interactions for RNA: ENST00000448526.6

CDKN1A-204, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDKN1A, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-204ENST00000448526 FHL3Q13643 280 aa12.49□□□□□ -0.41
CDKN1A-204ENST00000448526 TRPT1Q86TN4 253 aaKnown RBP12.49□□□□□ -0.41
CDKN1A-204ENST00000448526 YAE1D1Q9NRH1 226 aa12.49□□□□□ -0.41
CDKN1A-204ENST00000448526 SETD2Q9BYW2 2564 aaPredicted RBP12.49□□□□□ -0.41
CDKN1A-204ENST00000448526 IGHV3-73A0A0B4J1V6 119 aa12.49□□□□□ -0.41
CDKN1A-204ENST00000448526 H3BRM9 83 aa12.49□□□□□ -0.41
CDKN1A-204ENST00000448526 SPAG8Q99932 426 aaPredicted RBP12.49□□□□□ -0.41
CDKN1A-204ENST00000448526 IGLV4-69A0A075B6H9 119 aa12.48□□□□□ -0.41
CDKN1A-204ENST00000448526 J3QKU1 62 aa12.48□□□□□ -0.41
CDKN1A-204ENST00000448526 GCSHP23434 173 aa12.48□□□□□ -0.41
CDKN1A-204ENST00000448526 MTORP42345 2549 aa12.48□□□□□ -0.41
CDKN1A-204ENST00000448526 CCL24O00175 119 aa12.47□□□□□ -0.41
CDKN1A-204ENST00000448526 P0DMU3 169 aa12.47□□□□□ -0.41
CDKN1A-204ENST00000448526 FAM231AP0DMU4 169 aa12.47□□□□□ -0.41
CDKN1A-204ENST00000448526 FAM231CP0DMU5 169 aa12.47□□□□□ -0.41
CDKN1A-204ENST00000448526 EMP1P54849 157 aa12.47□□□□□ -0.41
CDKN1A-204ENST00000448526 ODF3L2Q3SX64 289 aa12.47□□□□□ -0.41
CDKN1A-204ENST00000448526 CITED2Q99967 270 aaPredicted RBP12.47□□□□□ -0.41
CDKN1A-204ENST00000448526 NAA38Q9BRA0 125 aaKnown RBP12.47□□□□□ -0.41
CDKN1A-204ENST00000448526 JMJD8Q96S16 334 aa12.47□□□□□ -0.41
CDKN1A-204ENST00000448526 C11orf86A6NJI1 115 aa12.46□□□□□ -0.41
CDKN1A-204ENST00000448526 RAB37Q96AX2 223 aa12.46□□□□□ -0.41
CDKN1A-204ENST00000448526 TIMM17AQ99595 171 aa12.46□□□□□ -0.41
CDKN1A-204ENST00000448526 C9orf118A6NHY6 69 aa12.46□□□□□ -0.42
CDKN1A-204ENST00000448526 PMVKQ15126 192 aa12.46□□□□□ -0.42
CDKN1A-204ENST00000448526 UFSP1Q6NVU6 142 aa12.46□□□□□ -0.42
CDKN1A-204ENST00000448526 LINC01006Q8NI28 216 aa12.46□□□□□ -0.42
CDKN1A-204ENST00000448526 TMEM141Q96I45 108 aa12.46□□□□□ -0.42
CDKN1A-204ENST00000448526 CST9LQ9H4G1 147 aa12.46□□□□□ -0.42
CDKN1A-204ENST00000448526 NSUN5P1Q3KNT7 163 aa12.45□□□□□ -0.42
CDKN1A-204ENST00000448526 C11orf72Q8NBR9 251 aa12.45□□□□□ -0.42
CDKN1A-204ENST00000448526 OR4C5Q8NGB2 326 aa12.45□□□□□ -0.42
CDKN1A-204ENST00000448526 OPRPNQ99935 248 aaPredicted RBP12.45□□□□□ -0.42
CDKN1A-204ENST00000448526 Q9UF83 564 aa12.45□□□□□ -0.42
CDKN1A-204ENST00000448526 NIPBLQ6KC79 2804 aaeCLIP12.45□□□□□ -0.42
CDKN1A-204ENST00000448526 LINC01549A6NIU2 74 aa12.44□□□□□ -0.42
CDKN1A-204ENST00000448526 OR11H12B2RN74 326 aa12.44□□□□□ -0.42
CDKN1A-204ENST00000448526 E9PLD3 99 aa12.44□□□□□ -0.42
CDKN1A-204ENST00000448526 M0R2P5 195 aa12.44□□□□□ -0.42
CDKN1A-204ENST00000448526 OR11H2Q8NH07 326 aa12.44□□□□□ -0.42
CDKN1A-204ENST00000448526 LINC01587Q99440 93 aa12.44□□□□□ -0.42
CDKN1A-204ENST00000448526 PRADC1Q9BSG0 188 aa12.44□□□□□ -0.42
CDKN1A-204ENST00000448526 UNC79Q9P2D8 2635 aa12.44□□□□□ -0.42
CDKN1A-204ENST00000448526 H3BUT2 72 aa12.44□□□□□ -0.42
CDKN1A-204ENST00000448526 ZNF415Q09FC8 603 aa12.44□□□□□ -0.42
CDKN1A-204ENST00000448526 RHOHQ15669 191 aa12.44□□□□□ -0.42
CDKN1A-204ENST00000448526 Q6ZSN1 163 aa12.44□□□□□ -0.42
CDKN1A-204ENST00000448526 CEND1Q8N111 149 aa12.44□□□□□ -0.42
CDKN1A-204ENST00000448526 MYMXA0A1B0GTQ4 84 aa12.43□□□□□ -0.42
CDKN1A-204ENST00000448526 I3L3M4 83 aa12.43□□□□□ -0.42
CDKN1A-204ENST00000448526 TM2D2Q9BX73 214 aa12.43□□□□□ -0.42
CDKN1A-204ENST00000448526 RNASE1P07998 156 aaKnown RBP12.43□□□□□ -0.42
CDKN1A-204ENST00000448526 EDA2RQ9HAV5 297 aa12.43□□□□□ -0.42
CDKN1A-204ENST00000448526 XCL2Q9UBD3 114 aa12.43□□□□□ -0.42
CDKN1A-204ENST00000448526 TRAV25A0A0B4J276 109 aa12.42□□□□□ -0.42
CDKN1A-204ENST00000448526 C20orf203Q8NBC4 194 aa12.42□□□□□ -0.42
CDKN1A-204ENST00000448526 LINC00467Q9BRT7 94 aa12.42□□□□□ -0.42
CDKN1A-204ENST00000448526 K7ERJ3 54 aa12.41□□□□□ -0.42
CDKN1A-204ENST00000448526 INSP01308 110 aa12.41□□□□□ -0.42
CDKN1A-204ENST00000448526 ZNRF2Q8NHG8 242 aa12.41□□□□□ -0.42
CDKN1A-204ENST00000448526 C16orf95Q9H693 158 aa12.41□□□□□ -0.42
CDKN1A-204ENST00000448526 TSSC4Q9Y5U2 329 aaPredicted RBP12.41□□□□□ -0.42
CDKN1A-204ENST00000448526 A8MWV9 139 aa12.41□□□□□ -0.42
CDKN1A-204ENST00000448526 AZU1P20160 251 aa12.41□□□□□ -0.42
CDKN1A-204ENST00000448526 CFAP126Q5VTH2 177 aa12.41□□□□□ -0.42
CDKN1A-204ENST00000448526 MRPL16Q9NX20 251 aaKnown RBP12.41□□□□□ -0.42
CDKN1A-204ENST00000448526 SMIM13P0DJ93 91 aa12.4□□□□□ -0.42
CDKN1A-204ENST00000448526 PHLDA1Q8WV24 401 aaPredicted RBP12.4□□□□□ -0.42
CDKN1A-204ENST00000448526 CLUHP3Q96NS8 147 aa12.4□□□□□ -0.42
CDKN1A-204ENST00000448526 TRBV7-3A0A075B6L6 115 aa12.4□□□□□ -0.43
CDKN1A-204ENST00000448526 PIK3CD-AS1Q5SR53 167 aa12.4□□□□□ -0.43
CDKN1A-204ENST00000448526 STHQ8IWL8 128 aa12.4□□□□□ -0.43
CDKN1A-204ENST00000448526 PTH2Q96A98 100 aa12.4□□□□□ -0.43
CDKN1A-204ENST00000448526 C1orf158Q8N1D5 194 aa12.39□□□□□ -0.43
CDKN1A-204ENST00000448526 NHP2Q9NX24 153 aaKnown RBP12.39□□□□□ -0.43
CDKN1A-204ENST00000448526 SETXQ7Z333 2677 aaKnown RBP12.39□□□□□ -0.43
CDKN1A-204ENST00000448526 TAL2Q16559 108 aa12.38□□□□□ -0.43
CDKN1A-204ENST00000448526 PAPPA-AS1Q5QFB9 102 aa12.38□□□□□ -0.43
CDKN1A-204ENST00000448526 PLEKHB2Q96CS7 222 aa12.38□□□□□ -0.43
CDKN1A-204ENST00000448526 HIST1H4GQ99525 98 aa12.38□□□□□ -0.43
CDKN1A-204ENST00000448526 FASNP49327 2511 aaKnown RBP12.38□□□□□ -0.43
CDKN1A-204ENST00000448526 ZNF815PA8K554 130 aa12.38□□□□□ -0.43
CDKN1A-204ENST00000448526 SMR3AQ99954 134 aa12.38□□□□□ -0.43
CDKN1A-204ENST00000448526 GAGE10A6NGK3 116 aa12.37□□□□□ -0.43
CDKN1A-204ENST00000448526 BEAN1Q3B7T3 259 aa12.37□□□□□ -0.43
CDKN1A-204ENST00000448526 RNASE8Q8TDE3 154 aaKnown RBP12.37□□□□□ -0.43
CDKN1A-204ENST00000448526 IGLV4-3A0A075B6K6 122 aa12.37□□□□□ -0.43
CDKN1A-204ENST00000448526 IGHV3OR16-12A0A075B7B8 117 aa12.37□□□□□ -0.43
CDKN1A-204ENST00000448526 A0A1W2PPM0 123 aa12.37□□□□□ -0.43
CDKN1A-204ENST00000448526 TSPEAR-AS2P59090 65 aa12.37□□□□□ -0.43
CDKN1A-204ENST00000448526 TMEM170BQ5T4T1 132 aa12.37□□□□□ -0.43
CDKN1A-204ENST00000448526 FAM104AQ969W3 186 aa12.37□□□□□ -0.43
CDKN1A-204ENST00000448526 SPXQ9BT56 116 aa12.37□□□□□ -0.43
CDKN1A-204ENST00000448526 TNFRSF18Q9Y5U5 241 aa12.36□□□□□ -0.43
CDKN1A-204ENST00000448526 JMJD1CQ15652 2540 aa12.36□□□□□ -0.43
CDKN1A-204ENST00000448526 ADARB2-AS1A8MUL3 147 aa12.35□□□□□ -0.43
CDKN1A-204ENST00000448526 K7EP34 96 aa12.35□□□□□ -0.43
CDKN1A-204ENST00000448526 RS1O15537 224 aa12.35□□□□□ -0.43
CDKN1A-204ENST00000448526 NFE4Q86UQ8 179 aa12.35□□□□□ -0.43
CDKN1A-204ENST00000448526 HILS1P60008 231 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 189.7 ms