RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 XKRY2A2RUG3 117 aa7.36□□□□□ -1.23
NPIPB3-202ENST00000448012 FUSP35637 526 aaKnown RBP eCLIP7.36□□□□□ -1.23
NPIPB3-202ENST00000448012 CEBPGP53567 150 aa7.36□□□□□ -1.23
NPIPB3-202ENST00000448012 RAB4BP61018 213 aa7.36□□□□□ -1.23
NPIPB3-202ENST00000448012 RHEBQ15382 184 aa7.36□□□□□ -1.23
NPIPB3-202ENST00000448012 UFSP1Q6NVU6 142 aa7.36□□□□□ -1.23
NPIPB3-202ENST00000448012 FRZBQ92765 325 aa7.36□□□□□ -1.23
NPIPB3-202ENST00000448012 TRBV7-3A0A075B6L6 115 aa7.35□□□□□ -1.23
NPIPB3-202ENST00000448012 TMEM262E9PQX1 116 aa7.35□□□□□ -1.23
NPIPB3-202ENST00000448012 GHRHP01286 108 aa7.35□□□□□ -1.23
NPIPB3-202ENST00000448012 LINC00694P0DN24 101 aa7.35□□□□□ -1.23
NPIPB3-202ENST00000448012 RPL35P42766 123 aaKnown RBP7.35□□□□□ -1.23
NPIPB3-202ENST00000448012 RPS20P60866 119 aaKnown RBP7.35□□□□□ -1.23
NPIPB3-202ENST00000448012 PKIAP61925 76 aa7.35□□□□□ -1.23
NPIPB3-202ENST00000448012 FAM74A3Q4VXF1 159 aa7.35□□□□□ -1.23
NPIPB3-202ENST00000448012 CHCHD7Q9BUK0 85 aa7.35□□□□□ -1.23
NPIPB3-202ENST00000448012 BIN3Q9NQY0 253 aa7.35□□□□□ -1.23
NPIPB3-202ENST00000448012 PDE6DO43924 150 aa7.34□□□□□ -1.23
NPIPB3-202ENST00000448012 GNG4P50150 75 aa7.34□□□□□ -1.23
NPIPB3-202ENST00000448012 SSTP61278 116 aa7.34□□□□□ -1.23
NPIPB3-202ENST00000448012 RPL19P84098 196 aaKnown RBP7.34□□□□□ -1.23
NPIPB3-202ENST00000448012 PNRC1Q12796 327 aaPredicted RBP7.34□□□□□ -1.23
NPIPB3-202ENST00000448012 TMEM97Q5BJF2 176 aa7.34□□□□□ -1.23
NPIPB3-202ENST00000448012 DAZ4Q86SG3 579 aaKnown RBP7.34□□□□□ -1.23
NPIPB3-202ENST00000448012 Q8N814 137 aa7.34□□□□□ -1.23
NPIPB3-202ENST00000448012 OR10AG1Q8NH19 301 aa7.34□□□□□ -1.23
NPIPB3-202ENST00000448012 AP1S3Q96PC3 154 aa7.34□□□□□ -1.23
NPIPB3-202ENST00000448012 MLST8Q9BVC4 326 aa7.34□□□□□ -1.23
NPIPB3-202ENST00000448012 TPPP3Q9BW30 176 aa7.34□□□□□ -1.23
NPIPB3-202ENST00000448012 DAZ3Q9NR90 486 aaKnown RBP7.34□□□□□ -1.23
NPIPB3-202ENST00000448012 CRPP02741 224 aa7.33□□□□□ -1.24
NPIPB3-202ENST00000448012 OR5AL1P0C617 328 aa7.33□□□□□ -1.24
NPIPB3-202ENST00000448012 KRTAP10-1P60331 282 aa7.33□□□□□ -1.24
NPIPB3-202ENST00000448012 CENPWQ5EE01 88 aa7.33□□□□□ -1.24
NPIPB3-202ENST00000448012 NIT1Q86X76 327 aa7.33□□□□□ -1.24
NPIPB3-202ENST00000448012 CBLN2Q8IUK8 224 aa7.33□□□□□ -1.24
NPIPB3-202ENST00000448012 OR2D3Q8NGH3 330 aa7.33□□□□□ -1.24
NPIPB3-202ENST00000448012 C11orf52Q96A22 123 aa7.33□□□□□ -1.24
NPIPB3-202ENST00000448012 SMIM12Q96EX1 92 aa7.33□□□□□ -1.24
NPIPB3-202ENST00000448012 SMIM7Q9BQ49 75 aa7.33□□□□□ -1.24
NPIPB3-202ENST00000448012 RPS10P5Q9NQ39 176 aa7.33□□□□□ -1.24
NPIPB3-202ENST00000448012 SMCO4Q9NRQ5 59 aa7.33□□□□□ -1.24
NPIPB3-202ENST00000448012 NAT8Q9UHE5 227 aa7.33□□□□□ -1.24
NPIPB3-202ENST00000448012 IGKV2D-24A0A075B6R9 120 aa7.32□□□□□ -1.24
NPIPB3-202ENST00000448012 C7orf77A4D0Y5 90 aa7.32□□□□□ -1.24
NPIPB3-202ENST00000448012 LRCOL1A6NCL2 159 aa7.32□□□□□ -1.24
NPIPB3-202ENST00000448012 ZNF727A8MUV8 499 aa7.32□□□□□ -1.24
NPIPB3-202ENST00000448012 H7C1H1 209 aa7.32□□□□□ -1.24
NPIPB3-202ENST00000448012 SNAI2O43623 268 aa7.32□□□□□ -1.24
NPIPB3-202ENST00000448012 UBE2D3P61077 147 aa7.32□□□□□ -1.24
NPIPB3-202ENST00000448012 UBE2D2P62837 147 aa7.32□□□□□ -1.24
NPIPB3-202ENST00000448012 Q0VG73 95 aa7.32□□□□□ -1.24
NPIPB3-202ENST00000448012 FER1L6-AS1Q8NA97 138 aa7.32□□□□□ -1.24
NPIPB3-202ENST00000448012 OR10G8Q8NGN5 311 aa7.32□□□□□ -1.24
NPIPB3-202ENST00000448012 UBE2WQ96B02 151 aa7.32□□□□□ -1.24
NPIPB3-202ENST00000448012 TMEM70Q9BUB7 260 aa7.32□□□□□ -1.24
NPIPB3-202ENST00000448012 KRTAP4-5Q9BYR2 181 aa7.32□□□□□ -1.24
NPIPB3-202ENST00000448012 KLK12Q9UKR0 248 aa7.32□□□□□ -1.24
NPIPB3-202ENST00000448012 TRBV6-8A0A0A6YYG3 113 aa7.31□□□□□ -1.24
NPIPB3-202ENST00000448012 MUC21A0A0G2JKD1 596 aa7.31□□□□□ -1.24
NPIPB3-202ENST00000448012 MUC21A0A140T8X8 626 aa7.31□□□□□ -1.24
NPIPB3-202ENST00000448012 FAM229AH3BQW9 127 aa7.31□□□□□ -1.24
NPIPB3-202ENST00000448012 P01737 135 aa7.31□□□□□ -1.24
NPIPB3-202ENST00000448012 MGPP08493 103 aa7.31□□□□□ -1.24
NPIPB3-202ENST00000448012 CACNG7P62955 275 aa7.31□□□□□ -1.24
NPIPB3-202ENST00000448012 Q8N976 141 aa7.31□□□□□ -1.24
NPIPB3-202ENST00000448012 CHCHD5Q9BSY4 110 aa7.31□□□□□ -1.24
NPIPB3-202ENST00000448012 DERL1Q9BUN8 251 aa7.31□□□□□ -1.24
NPIPB3-202ENST00000448012 SSBP4Q9BWG4 385 aaPredicted RBP7.31□□□□□ -1.24
NPIPB3-202ENST00000448012 C1orf43Q9BWL3 253 aa7.31□□□□□ -1.24
NPIPB3-202ENST00000448012 Q9UF83 564 aa7.31□□□□□ -1.24
NPIPB3-202ENST00000448012 F2Z2F3 143 aa7.3□□□□□ -1.24
NPIPB3-202ENST00000448012 EIF4EBP3O60516 100 aaPredicted RBP7.3□□□□□ -1.24
NPIPB3-202ENST00000448012 TRGC1P0CF51 173 aa7.3□□□□□ -1.24
NPIPB3-202ENST00000448012 TMEM241Q24JQ0 296 aa7.3□□□□□ -1.24
NPIPB3-202ENST00000448012 Q8N3U1 123 aa7.3□□□□□ -1.24
NPIPB3-202ENST00000448012 C15orf54Q8N8G6 183 aa7.3□□□□□ -1.24
NPIPB3-202ENST00000448012 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.29□□□□□ -1.24
NPIPB3-202ENST00000448012 LECT2O14960 151 aa7.29□□□□□ -1.24
NPIPB3-202ENST00000448012 ANGP03950 147 aaKnown RBP7.29□□□□□ -1.24
NPIPB3-202ENST00000448012 ADIRFQ15847 76 aa7.29□□□□□ -1.24
NPIPB3-202ENST00000448012 C14orf177Q52M58 125 aa7.29□□□□□ -1.24
NPIPB3-202ENST00000448012 NEXN-AS1Q8NBZ9 246 aa7.29□□□□□ -1.24
NPIPB3-202ENST00000448012 PCLOQ9Y6V0 5065 aa7.29□□□□□ -1.24
NPIPB3-202ENST00000448012 TRBV25-1A0A075B6N4 114 aa7.28□□□□□ -1.24
NPIPB3-202ENST00000448012 INAFM2P0DMQ5 153 aa7.28□□□□□ -1.24
NPIPB3-202ENST00000448012 XGP55808 180 aa7.28□□□□□ -1.24
NPIPB3-202ENST00000448012 Q5VSD8 79 aa7.28□□□□□ -1.24
NPIPB3-202ENST00000448012 BAALCQ8WXS3 180 aa7.28□□□□□ -1.24
NPIPB3-202ENST00000448012 DNAJC30Q96LL9 226 aa7.28□□□□□ -1.24
NPIPB3-202ENST00000448012 LRP1BQ9NZR2 4599 aa7.28□□□□□ -1.24
NPIPB3-202ENST00000448012 RYR1P21817 5038 aa7.27□□□□□ -1.24
NPIPB3-202ENST00000448012 HSPG2P98160 4391 aa7.27□□□□□ -1.25
NPIPB3-202ENST00000448012 SMR3BP02814 79 aaPredicted RBP7.27□□□□□ -1.25
NPIPB3-202ENST00000448012 MT-ND4LP03901 98 aa7.27□□□□□ -1.25
NPIPB3-202ENST00000448012 GZMBP10144 247 aa7.27□□□□□ -1.25
NPIPB3-202ENST00000448012 RPL23P62829 140 aaKnown RBP7.27□□□□□ -1.25
NPIPB3-202ENST00000448012 SMIM15Q7Z3B0 74 aa7.27□□□□□ -1.25
NPIPB3-202ENST00000448012 CTDSP1Q9GZU7 261 aa7.27□□□□□ -1.25
NPIPB3-202ENST00000448012 IGHV1-24A0A0C4DH33 117 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms