RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 NDUFAF3Q9BU61 184 aa17.64■□□□□ 0.41
RFFL-206ENST00000447669 LINC00612Q8N6U2 182 aa17.64■□□□□ 0.41
RFFL-206ENST00000447669 HIST1H2BLQ99880 126 aa17.64■□□□□ 0.41
RFFL-206ENST00000447669 IGLV2-18A0A075B6J9 118 aa17.63■□□□□ 0.41
RFFL-206ENST00000447669 RHODO00212 210 aa17.63■□□□□ 0.41
RFFL-206ENST00000447669 TCAPO15273 167 aa17.63■□□□□ 0.41
RFFL-206ENST00000447669 S100A2P29034 98 aa17.63■□□□□ 0.41
RFFL-206ENST00000447669 FA2HQ7L5A8 372 aa17.63■□□□□ 0.41
RFFL-206ENST00000447669 ZFP2Q6ZN57 461 aa17.62■□□□□ 0.41
RFFL-206ENST00000447669 HSBP1O75506 76 aa17.62■□□□□ 0.41
RFFL-206ENST00000447669 ESDP10768 282 aa17.62■□□□□ 0.41
RFFL-206ENST00000447669 HUWE1Q7Z6Z7 4374 aaKnown RBP17.61■□□□□ 0.41
RFFL-206ENST00000447669 LYRM9A8MSI8 78 aa17.6■□□□□ 0.41
RFFL-206ENST00000447669 SLC25A29Q8N8R3 303 aa17.6■□□□□ 0.41
RFFL-206ENST00000447669 SMIM2Q9BVW6 85 aa17.6■□□□□ 0.41
RFFL-206ENST00000447669 ST20Q9HBF5 79 aa17.6■□□□□ 0.41
RFFL-206ENST00000447669 NIT2Q9NQR4 276 aa17.6■□□□□ 0.41
RFFL-206ENST00000447669 AMTP48728 403 aa17.6■□□□□ 0.41
RFFL-206ENST00000447669 AP5S1Q9NUS5 200 aa17.6■□□□□ 0.41
RFFL-206ENST00000447669 COL7A1Q02388 2944 aa17.6■□□□□ 0.41
RFFL-206ENST00000447669 SDHAF1A6NFY7 115 aa17.59■□□□□ 0.41
RFFL-206ENST00000447669 FHL2Q14192 279 aa17.59■□□□□ 0.41
RFFL-206ENST00000447669 NEXN-AS1Q8NBZ9 246 aa17.59■□□□□ 0.41
RFFL-206ENST00000447669 TMEM70Q9BUB7 260 aa17.59■□□□□ 0.41
RFFL-206ENST00000447669 TRGV4A0A0C4DH28 118 aa17.59■□□□□ 0.41
RFFL-206ENST00000447669 IGHV1-24A0A0C4DH33 117 aa17.59■□□□□ 0.41
RFFL-206ENST00000447669 AKR1D1P51857 326 aa17.59■□□□□ 0.41
RFFL-206ENST00000447669 Q8N8P6 123 aa17.59■□□□□ 0.41
RFFL-206ENST00000447669 CHCHD1Q96BP2 118 aaKnown RBP17.59■□□□□ 0.41
RFFL-206ENST00000447669 C20orf78Q9BR46 151 aa17.59■□□□□ 0.41
RFFL-206ENST00000447669 LOC100131303A0A0U1RQF7 123 aa17.58■□□□□ 0.4
RFFL-206ENST00000447669 PRSS47A8MTI9 375 aa17.58■□□□□ 0.4
RFFL-206ENST00000447669 TM2D3Q9BRN9 247 aa17.58■□□□□ 0.4
RFFL-206ENST00000447669 A0A0J9YWU9 116 aa17.57■□□□□ 0.4
RFFL-206ENST00000447669 POLR2KP53803 58 aaKnown RBP17.57■□□□□ 0.4
RFFL-206ENST00000447669 DAD1P61803 113 aa17.57■□□□□ 0.4
RFFL-206ENST00000447669 SPART-AS1P0CW21 52 aa17.57■□□□□ 0.4
RFFL-206ENST00000447669 NXT2Q9NPJ8 142 aaKnown RBP17.57■□□□□ 0.4
RFFL-206ENST00000447669 OR10D4PQ8NGN7 298 aa17.56■□□□□ 0.4
RFFL-206ENST00000447669 A0A096LNJ9 63 aa17.55■□□□□ 0.4
RFFL-206ENST00000447669 H7C1H1 209 aa17.55■□□□□ 0.4
RFFL-206ENST00000447669 PPP1R17O96001 155 aa17.55■□□□□ 0.4
RFFL-206ENST00000447669 TRBV6-5A0A0K0K1A5 114 aa17.55■□□□□ 0.4
RFFL-206ENST00000447669 K7EQD1 137 aa17.55■□□□□ 0.4
RFFL-206ENST00000447669 TMEM18Q96B42 140 aa17.55■□□□□ 0.4
RFFL-206ENST00000447669 SPATA25Q9BR10 227 aa17.55■□□□□ 0.4
RFFL-206ENST00000447669 EDA2RQ9HAV5 297 aa17.55■□□□□ 0.4
RFFL-206ENST00000447669 TNFRSF18Q9Y5U5 241 aa17.55■□□□□ 0.4
RFFL-206ENST00000447669 IGHV3-38A0A0C4DH36 116 aa17.54■□□□□ 0.4
RFFL-206ENST00000447669 LINC00173Q6ZV60 143 aa17.54■□□□□ 0.4
RFFL-206ENST00000447669 PACRGQ96M98 296 aaPredicted RBP17.54■□□□□ 0.4
RFFL-206ENST00000447669 ZNRF2Q8NHG8 242 aa17.54■□□□□ 0.4
RFFL-206ENST00000447669 PHLDA1Q8WV24 401 aaPredicted RBP17.54■□□□□ 0.4
RFFL-206ENST00000447669 C18orf15Q96N68 181 aa17.54■□□□□ 0.4
RFFL-206ENST00000447669 MEGF8Q7Z7M0 2845 aa17.53■□□□□ 0.4
RFFL-206ENST00000447669 HTN3P15516 51 aa17.53■□□□□ 0.4
RFFL-206ENST00000447669 DNAH9Q9NYC9 4486 aa17.53■□□□□ 0.4
RFFL-206ENST00000447669 C12orf74Q32Q52 190 aa17.52■□□□□ 0.4
RFFL-206ENST00000447669 GAGE12JA6NER3 117 aa17.52■□□□□ 0.39
RFFL-206ENST00000447669 GAGE1Q13065 139 aa17.52■□□□□ 0.39
RFFL-206ENST00000447669 GAGE4Q13068 117 aa17.52■□□□□ 0.39
RFFL-206ENST00000447669 GAGE5Q13069 117 aa17.52■□□□□ 0.39
RFFL-206ENST00000447669 GAGE13Q4V321 117 aa17.52■□□□□ 0.39
RFFL-206ENST00000447669 HHLA3Q9XRX5 114 aa17.52■□□□□ 0.39
RFFL-206ENST00000447669 LINC01546A6NGU7 62 aa17.51■□□□□ 0.39
RFFL-206ENST00000447669 TRBV27A0A0K0K1C4 114 aa17.5■□□□□ 0.39
RFFL-206ENST00000447669 VCYO14598 125 aa17.5■□□□□ 0.39
RFFL-206ENST00000447669 LAGE3Q14657 143 aa17.5■□□□□ 0.39
RFFL-206ENST00000447669 PRKDCP78527 4128 aaKnown RBP17.49■□□□□ 0.39
RFFL-206ENST00000447669 DEFA6Q01524 100 aa17.49■□□□□ 0.39
RFFL-206ENST00000447669 TRBV6-4A0A1B0GX49 114 aa17.48■□□□□ 0.39
RFFL-206ENST00000447669 C11orf68Q9H3H3 251 aaKnown RBP17.48■□□□□ 0.39
RFFL-206ENST00000447669 A0A0J9YY99 117 aa17.48■□□□□ 0.39
RFFL-206ENST00000447669 BTF3P20290 206 aaKnown RBP17.48■□□□□ 0.39
RFFL-206ENST00000447669 TRBV7-3A0A075B6L6 115 aa17.47■□□□□ 0.39
RFFL-206ENST00000447669 TSHBP01222 138 aa17.47■□□□□ 0.39
RFFL-206ENST00000447669 F5H768 121 aa17.47■□□□□ 0.39
RFFL-206ENST00000447669 NANOS2P60321 138 aaKnown RBP17.47■□□□□ 0.39
RFFL-206ENST00000447669 RPL32P62910 135 aaKnown RBP17.47■□□□□ 0.39
RFFL-206ENST00000447669 I3L3M4 83 aa17.46■□□□□ 0.39
RFFL-206ENST00000447669 CIDEAO60543 219 aa17.46■□□□□ 0.39
RFFL-206ENST00000447669 NUDT3O95989 172 aa17.46■□□□□ 0.39
RFFL-206ENST00000447669 ATP5G1P05496 136 aa17.46■□□□□ 0.39
RFFL-206ENST00000447669 CRYBA4P53673 196 aa17.46■□□□□ 0.39
RFFL-206ENST00000447669 Q6ZTC4 211 aa17.46■□□□□ 0.39
RFFL-206ENST00000447669 KIR2DL4Q99706 377 aa17.46■□□□□ 0.39
RFFL-206ENST00000447669 DNAJC30Q96LL9 226 aa17.45■□□□□ 0.38
RFFL-206ENST00000447669 LEPROTL1O95214 131 aa17.45■□□□□ 0.38
RFFL-206ENST00000447669 HBDP02042 147 aa17.45■□□□□ 0.38
RFFL-206ENST00000447669 FCER1GP30273 86 aa17.45■□□□□ 0.38
RFFL-206ENST00000447669 RPL36AP83881 106 aaKnown RBP17.45■□□□□ 0.38
RFFL-206ENST00000447669 RHOHQ15669 191 aa17.45■□□□□ 0.38
RFFL-206ENST00000447669 RPL36ALQ969Q0 106 aaKnown RBP17.45■□□□□ 0.38
RFFL-206ENST00000447669 ZMAT4Q9H898 229 aa17.45■□□□□ 0.38
RFFL-206ENST00000447669 TRBV10-1A0A0K0K1A3 114 aa17.44■□□□□ 0.38
RFFL-206ENST00000447669 GYPEP15421 78 aa17.43■□□□□ 0.38
RFFL-206ENST00000447669 VSIG2Q96IQ7 327 aa17.43■□□□□ 0.38
RFFL-206ENST00000447669 PRO0255Q9UI72 69 aa17.43■□□□□ 0.38
RFFL-206ENST00000447669 KRTDAPP60985 99 aa17.43■□□□□ 0.38
RFFL-206ENST00000447669 RPL39P62891 51 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms