RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 PF4P02776 101 aa6.97□□□□□ -1.29
COL6A4P1-201ENST00000446690 OTOGQ6ZRI0 2925 aa6.97□□□□□ -1.29
COL6A4P1-201ENST00000446690 SETD2Q9BYW2 2564 aaPredicted RBP6.97□□□□□ -1.29
COL6A4P1-201ENST00000446690 ATP5LO75964 103 aa6.96□□□□□ -1.29
COL6A4P1-201ENST00000446690 C2orf91Q6ZV80 131 aa6.96□□□□□ -1.29
COL6A4P1-201ENST00000446690 WNK1Q9H4A3 2382 aa6.96□□□□□ -1.29
COL6A4P1-201ENST00000446690 ZNF415Q09FC8 603 aa6.96□□□□□ -1.3
COL6A4P1-201ENST00000446690 SCGB3A1Q96QR1 104 aa6.96□□□□□ -1.3
COL6A4P1-201ENST00000446690 WFDC10AQ9H1F0 79 aa6.96□□□□□ -1.3
COL6A4P1-201ENST00000446690 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.95□□□□□ -1.3
COL6A4P1-201ENST00000446690 IGLV1-51P01701 117 aa6.95□□□□□ -1.3
COL6A4P1-201ENST00000446690 SEC11AP67812 179 aa6.95□□□□□ -1.3
COL6A4P1-201ENST00000446690 NDUFA11Q86Y39 141 aa6.95□□□□□ -1.3
COL6A4P1-201ENST00000446690 SDHAF1A6NFY7 115 aa6.95□□□□□ -1.3
COL6A4P1-201ENST00000446690 M0QY20 66 aa6.95□□□□□ -1.3
COL6A4P1-201ENST00000446690 M0R2P5 195 aa6.95□□□□□ -1.3
COL6A4P1-201ENST00000446690 VCYO14598 125 aa6.95□□□□□ -1.3
COL6A4P1-201ENST00000446690 COX8AP10176 69 aa6.95□□□□□ -1.3
COL6A4P1-201ENST00000446690 RPL35AP18077 110 aaKnown RBP6.95□□□□□ -1.3
COL6A4P1-201ENST00000446690 C2orf66Q6UXQ4 117 aa6.95□□□□□ -1.3
COL6A4P1-201ENST00000446690 GTF2H5Q6ZYL4 71 aa6.95□□□□□ -1.3
COL6A4P1-201ENST00000446690 TRPT1Q86TN4 253 aaKnown RBP6.95□□□□□ -1.3
COL6A4P1-201ENST00000446690 AZU1P20160 251 aa6.94□□□□□ -1.3
COL6A4P1-201ENST00000446690 ODF1Q14990 250 aa6.94□□□□□ -1.3
COL6A4P1-201ENST00000446690 TMEM97Q5BJF2 176 aa6.94□□□□□ -1.3
COL6A4P1-201ENST00000446690 SVIPQ8NHG7 77 aa6.94□□□□□ -1.3
COL6A4P1-201ENST00000446690 TOMM6Q96B49 74 aa6.94□□□□□ -1.3
COL6A4P1-201ENST00000446690 KIR2DL4Q99706 377 aa6.94□□□□□ -1.3
COL6A4P1-201ENST00000446690 C9orf118A6NHY6 69 aa6.94□□□□□ -1.3
COL6A4P1-201ENST00000446690 K7EMI3 77 aa6.94□□□□□ -1.3
COL6A4P1-201ENST00000446690 POLR2KP53803 58 aaKnown RBP6.94□□□□□ -1.3
COL6A4P1-201ENST00000446690 CMC4P56277 68 aaPredicted RBP6.94□□□□□ -1.3
COL6A4P1-201ENST00000446690 MRPL16Q9NX20 251 aaKnown RBP6.94□□□□□ -1.3
COL6A4P1-201ENST00000446690 K7EP34 96 aa6.93□□□□□ -1.3
COL6A4P1-201ENST00000446690 IGKCP01834 107 aa6.93□□□□□ -1.3
COL6A4P1-201ENST00000446690 NMUP48645 174 aa6.93□□□□□ -1.3
COL6A4P1-201ENST00000446690 MORN3Q6PF18 240 aaPredicted RBP6.93□□□□□ -1.3
COL6A4P1-201ENST00000446690 C1orf158Q8N1D5 194 aa6.93□□□□□ -1.3
COL6A4P1-201ENST00000446690 MRPL35Q9NZE8 188 aaKnown RBP6.93□□□□□ -1.3
COL6A4P1-201ENST00000446690 H3BRM9 83 aa6.93□□□□□ -1.3
COL6A4P1-201ENST00000446690 P0DMU3 169 aa6.93□□□□□ -1.3
COL6A4P1-201ENST00000446690 FAM231AP0DMU4 169 aa6.93□□□□□ -1.3
COL6A4P1-201ENST00000446690 FAM231CP0DMU5 169 aa6.93□□□□□ -1.3
COL6A4P1-201ENST00000446690 ZFP2Q6ZN57 461 aa6.93□□□□□ -1.3
COL6A4P1-201ENST00000446690 C11orf72Q8NBR9 251 aa6.93□□□□□ -1.3
COL6A4P1-201ENST00000446690 CLUHP3Q96NS8 147 aa6.93□□□□□ -1.3
COL6A4P1-201ENST00000446690 A8MWV9 139 aa6.92□□□□□ -1.3
COL6A4P1-201ENST00000446690 CRLF1O75462 422 aa6.92□□□□□ -1.3
COL6A4P1-201ENST00000446690 DPM2O94777 84 aa6.92□□□□□ -1.3
COL6A4P1-201ENST00000446690 FGF6P10767 208 aa6.92□□□□□ -1.3
COL6A4P1-201ENST00000446690 TP53TG1Q9Y2A0 90 aa6.92□□□□□ -1.3
COL6A4P1-201ENST00000446690 A0A087WX48 190 aa6.92□□□□□ -1.3
COL6A4P1-201ENST00000446690 TRBV6-5A0A0K0K1A5 114 aa6.92□□□□□ -1.3
COL6A4P1-201ENST00000446690 H3BUT2 72 aa6.92□□□□□ -1.3
COL6A4P1-201ENST00000446690 RPL39P62891 51 aaKnown RBP6.92□□□□□ -1.3
COL6A4P1-201ENST00000446690 BEAN1Q3B7T3 259 aa6.92□□□□□ -1.3
COL6A4P1-201ENST00000446690 GTSCR1Q86UQ5 136 aa6.92□□□□□ -1.3
COL6A4P1-201ENST00000446690 NAA38Q9BRA0 125 aaKnown RBP6.92□□□□□ -1.3
COL6A4P1-201ENST00000446690 CYSLTR1Q9Y271 337 aa6.92□□□□□ -1.3
COL6A4P1-201ENST00000446690 TRBV27A0A0K0K1C4 114 aa6.91□□□□□ -1.3
COL6A4P1-201ENST00000446690 RPL32P62910 135 aaKnown RBP6.91□□□□□ -1.3
COL6A4P1-201ENST00000446690 CFAP126Q5VTH2 177 aa6.91□□□□□ -1.3
COL6A4P1-201ENST00000446690 Q6ZSN1 163 aa6.91□□□□□ -1.3
COL6A4P1-201ENST00000446690 LINC00482Q8N8I6 264 aa6.91□□□□□ -1.3
COL6A4P1-201ENST00000446690 LINC00467Q9BRT7 94 aa6.91□□□□□ -1.3
COL6A4P1-201ENST00000446690 SPXQ9BT56 116 aa6.91□□□□□ -1.3
COL6A4P1-201ENST00000446690 ZMAT4Q9H898 229 aa6.91□□□□□ -1.3
COL6A4P1-201ENST00000446690 HHLA3Q9XRX5 114 aa6.91□□□□□ -1.3
COL6A4P1-201ENST00000446690 NIPBLQ6KC79 2804 aaeCLIP6.91□□□□□ -1.3
COL6A4P1-201ENST00000446690 TRGV1A0A0A0MS02 117 aa6.9□□□□□ -1.3
COL6A4P1-201ENST00000446690 A6NDN8 102 aa6.9□□□□□ -1.3
COL6A4P1-201ENST00000446690 H7C1H1 209 aa6.9□□□□□ -1.3
COL6A4P1-201ENST00000446690 ZC2HC1BQ5TFG8 222 aa6.9□□□□□ -1.3
COL6A4P1-201ENST00000446690 BAALCQ8WXS3 180 aa6.9□□□□□ -1.3
COL6A4P1-201ENST00000446690 C19orf73Q9NVV2 129 aa6.9□□□□□ -1.3
COL6A4P1-201ENST00000446690 TNFRSF18Q9Y5U5 241 aa6.9□□□□□ -1.3
COL6A4P1-201ENST00000446690 SETXQ7Z333 2677 aaKnown RBP6.9□□□□□ -1.3
COL6A4P1-201ENST00000446690 I3L3M4 83 aa6.9□□□□□ -1.31
COL6A4P1-201ENST00000446690 PCP2Q8IVA1 136 aa6.9□□□□□ -1.31
COL6A4P1-201ENST00000446690 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.9□□□□□ -1.31
COL6A4P1-201ENST00000446690 Q9UF83 564 aa6.9□□□□□ -1.31
COL6A4P1-201ENST00000446690 GIG44P09565 113 aaPredicted RBP6.89□□□□□ -1.31
COL6A4P1-201ENST00000446690 NEXN-AS1Q8NBZ9 246 aa6.89□□□□□ -1.31
COL6A4P1-201ENST00000446690 SPATA3Q8NHX4 192 aa6.89□□□□□ -1.31
COL6A4P1-201ENST00000446690 IGKV2D-26A0A0A0MRZ7 120 aa6.89□□□□□ -1.31
COL6A4P1-201ENST00000446690 PRSS29PA6NIE9 313 aa6.89□□□□□ -1.31
COL6A4P1-201ENST00000446690 F8VRH5 84 aa6.89□□□□□ -1.31
COL6A4P1-201ENST00000446690 OR5A1Q8NGJ0 315 aa6.89□□□□□ -1.31
COL6A4P1-201ENST00000446690 TRAV12-1A0A0B4J245 112 aa6.88□□□□□ -1.31
COL6A4P1-201ENST00000446690 A0A1W2PPM0 123 aa6.88□□□□□ -1.31
COL6A4P1-201ENST00000446690 TSHBP01222 138 aa6.88□□□□□ -1.31
COL6A4P1-201ENST00000446690 IGHV3-53P01767 116 aa6.88□□□□□ -1.31
COL6A4P1-201ENST00000446690 PLNP26678 52 aa6.88□□□□□ -1.31
COL6A4P1-201ENST00000446690 HSD52Q0P140 79 aa6.88□□□□□ -1.31
COL6A4P1-201ENST00000446690 BOD1L2Q8IYS8 172 aa6.88□□□□□ -1.31
COL6A4P1-201ENST00000446690 FAM110AQ9BQ89 295 aa6.88□□□□□ -1.31
COL6A4P1-201ENST00000446690 TTTY13Q9BZ97 58 aa6.88□□□□□ -1.31
COL6A4P1-201ENST00000446690 NOP10Q9NPE3 64 aaKnown RBP6.88□□□□□ -1.31
COL6A4P1-201ENST00000446690 SPCS1Q9Y6A9 102 aa6.88□□□□□ -1.31
COL6A4P1-201ENST00000446690 FN1P02751 2386 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms