RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 RNASE13Q5GAN3 156 aaKnown RBP10.41□□□□□ -0.74
VPS52-212ENST00000445902 Q6Q795 121 aa10.4□□□□□ -0.74
VPS52-212ENST00000445902 COL12A1Q99715 3063 aa10.4□□□□□ -0.75
VPS52-212ENST00000445902 A8MZ25 164 aa10.4□□□□□ -0.75
VPS52-212ENST00000445902 BRI3O95415 125 aa10.4□□□□□ -0.75
VPS52-212ENST00000445902 ICOSQ9Y6W8 199 aa10.4□□□□□ -0.75
VPS52-212ENST00000445902 M0R2P5 195 aa10.39□□□□□ -0.75
VPS52-212ENST00000445902 ADAMTSL4-AS1Q5T5F5 129 aa10.39□□□□□ -0.75
VPS52-212ENST00000445902 Q8NA96 180 aa10.39□□□□□ -0.75
VPS52-212ENST00000445902 MAP1AP78559 2803 aaPredicted RBP10.39□□□□□ -0.75
VPS52-212ENST00000445902 IGKV3-20P01619 116 aa10.39□□□□□ -0.75
VPS52-212ENST00000445902 SAA4P35542 130 aa10.39□□□□□ -0.75
VPS52-212ENST00000445902 TRBV30A0A0K0K1B3 111 aa10.38□□□□□ -0.75
VPS52-212ENST00000445902 SOCS3O14543 225 aa10.38□□□□□ -0.75
VPS52-212ENST00000445902 MINOS1Q5TGZ0 78 aa10.38□□□□□ -0.75
VPS52-212ENST00000445902 IGHV3OR16-10A0A075B7F0 116 aa10.38□□□□□ -0.75
VPS52-212ENST00000445902 TRBV27A0A0K0K1C4 114 aa10.38□□□□□ -0.75
VPS52-212ENST00000445902 IGHV3-30-3P0DP02 117 aa10.38□□□□□ -0.75
VPS52-212ENST00000445902 MED14OSP0DP75 135 aa10.38□□□□□ -0.75
VPS52-212ENST00000445902 CEMP1Q6PRD7 247 aaPredicted RBP10.38□□□□□ -0.75
VPS52-212ENST00000445902 POM121L12Q8N7R1 296 aa10.38□□□□□ -0.75
VPS52-212ENST00000445902 MINOS1-NBL1R4GNA1 71 aa10.38□□□□□ -0.75
VPS52-212ENST00000445902 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.38□□□□□ -0.758e-10■■■■□ 26.3
VPS52-212ENST00000445902 EDN2P20800 178 aa10.38□□□□□ -0.75
VPS52-212ENST00000445902 DEFB123Q8N688 67 aa10.38□□□□□ -0.75
VPS52-212ENST00000445902 OOSP1A8MZH6 123 aa10.37□□□□□ -0.75
VPS52-212ENST00000445902 NXPH4O95158 308 aa10.37□□□□□ -0.75
VPS52-212ENST00000445902 DAND5Q8N907 189 aa10.37□□□□□ -0.75
VPS52-212ENST00000445902 FAM19A4Q96LR4 140 aa10.37□□□□□ -0.75
VPS52-212ENST00000445902 MDFICQ9P1T7 246 aa10.37□□□□□ -0.75
VPS52-212ENST00000445902 ZFHX2Q9C0A1 2572 aaPredicted RBP10.37□□□□□ -0.75
VPS52-212ENST00000445902 TRAV12-2A0A075B6T6 113 aa10.36□□□□□ -0.75
VPS52-212ENST00000445902 CEP295Q9C0D2 2601 aa10.36□□□□□ -0.75
VPS52-212ENST00000445902 ZNF292O60281 2723 aa10.36□□□□□ -0.75
VPS52-212ENST00000445902 TIMM21Q9BVV7 248 aa10.36□□□□□ -0.75
VPS52-212ENST00000445902 NACAE9PAV3 2078 aa10.35□□□□□ -0.75
VPS52-212ENST00000445902 LITAFQ99732 161 aa10.35□□□□□ -0.75
VPS52-212ENST00000445902 IGLV4-3A0A075B6K6 122 aa10.35□□□□□ -0.75
VPS52-212ENST00000445902 TRAV41A0A0B4J266 112 aa10.35□□□□□ -0.75
VPS52-212ENST00000445902 IGHV1-69P01742 117 aa10.35□□□□□ -0.75
VPS52-212ENST00000445902 SIRPDQ9H106 197 aa10.35□□□□□ -0.75
VPS52-212ENST00000445902 M0QY20 66 aa10.34□□□□□ -0.75
VPS52-212ENST00000445902 PPDPFQ9H3Y8 114 aa10.34□□□□□ -0.75
VPS52-212ENST00000445902 KLK9Q9UKQ9 250 aa10.34□□□□□ -0.75
VPS52-212ENST00000445902 TRGV11A0A075B6L2 103 aa10.34□□□□□ -0.75
VPS52-212ENST00000445902 FAM236AA0A1B0GUQ0 79 aa10.34□□□□□ -0.75
VPS52-212ENST00000445902 FAM236BA0A1B0GV22 79 aa10.34□□□□□ -0.75
VPS52-212ENST00000445902 COX6CP09669 75 aa10.34□□□□□ -0.75
VPS52-212ENST00000445902 C20orf203Q8NBC4 194 aa10.34□□□□□ -0.75
VPS52-212ENST00000445902 IGHV3-73A0A0B4J1V6 119 aa10.33□□□□□ -0.76
VPS52-212ENST00000445902 I3L3M4 83 aa10.33□□□□□ -0.76
VPS52-212ENST00000445902 CDSNQ15517 529 aa10.33□□□□□ -0.76
VPS52-212ENST00000445902 C5orf56Q8N8D9 126 aa10.33□□□□□ -0.76
VPS52-212ENST00000445902 RHPN1-AS1Q9BWJ2 59 aa10.33□□□□□ -0.76
VPS52-212ENST00000445902 CD28P10747 220 aa10.33□□□□□ -0.76
VPS52-212ENST00000445902 NDUFA12Q9UI09 145 aa10.33□□□□□ -0.76
VPS52-212ENST00000445902 NSUN5P1Q3KNT7 163 aa10.32□□□□□ -0.76
VPS52-212ENST00000445902 ATRXP46100 2492 aa10.32□□□□□ -0.76
VPS52-212ENST00000445902 DOPEY2Q9Y3R5 2298 aa10.32□□□□□ -0.76
VPS52-212ENST00000445902 APRG1Q8IVJ8 170 aa10.32□□□□□ -0.76
VPS52-212ENST00000445902 DUX5Q96PT3 197 aa10.32□□□□□ -0.76
VPS52-212ENST00000445902 LINC01587Q99440 93 aa10.32□□□□□ -0.76
VPS52-212ENST00000445902 UBTD1Q9HAC8 227 aa10.32□□□□□ -0.76
VPS52-212ENST00000445902 VPS13CQ709C8 3753 aa10.31□□□□□ -0.76
VPS52-212ENST00000445902 TRBV6-5A0A0K0K1A5 114 aa10.31□□□□□ -0.76
VPS52-212ENST00000445902 KLLNB2CW77 178 aa10.31□□□□□ -0.76
VPS52-212ENST00000445902 H3BT86 120 aa10.31□□□□□ -0.76
VPS52-212ENST00000445902 IGF2-ASQ6U949 168 aa10.31□□□□□ -0.76
VPS52-212ENST00000445902 VPREB3Q9UKI3 123 aa10.31□□□□□ -0.76
VPS52-212ENST00000445902 TNFRSF18Q9Y5U5 241 aa10.31□□□□□ -0.76
VPS52-212ENST00000445902 A0A0J9YX75 114 aa10.3□□□□□ -0.76
VPS52-212ENST00000445902 A0A0U1RRA0 63 aa10.3□□□□□ -0.76
VPS52-212ENST00000445902 LST1O00453 97 aa10.3□□□□□ -0.76
VPS52-212ENST00000445902 NDUFA4O00483 81 aa10.3□□□□□ -0.76
VPS52-212ENST00000445902 RHOHQ15669 191 aa10.3□□□□□ -0.76
VPS52-212ENST00000445902 KLK9Q2XQG4 91 aa10.3□□□□□ -0.76
VPS52-212ENST00000445902 CRYBG3Q68DQ2 2970 aa10.3□□□□□ -0.76
VPS52-212ENST00000445902 HTN1P15515 57 aa10.3□□□□□ -0.76
VPS52-212ENST00000445902 IGHV3-16A0A0C4DH30 117 aa10.29□□□□□ -0.76
VPS52-212ENST00000445902 CCL21O00585 134 aa10.29□□□□□ -0.76
VPS52-212ENST00000445902 LINC01600Q96MT4 127 aa10.29□□□□□ -0.76
VPS52-212ENST00000445902 FAM223BA6NKX1 122 aa10.29□□□□□ -0.76
VPS52-212ENST00000445902 PF4V1P10720 104 aa10.29□□□□□ -0.76
VPS52-212ENST00000445902 PROK1P58294 105 aa10.29□□□□□ -0.76
VPS52-212ENST00000445902 LY6EQ16553 131 aa10.29□□□□□ -0.76
VPS52-212ENST00000445902 MIAQ16674 131 aa10.29□□□□□ -0.76
VPS52-212ENST00000445902 FAM223AQ8IWN6 122 aa10.29□□□□□ -0.76
VPS52-212ENST00000445902 TMEM101Q96IK0 257 aa10.29□□□□□ -0.76
VPS52-212ENST00000445902 CREBBPQ92793 2442 aa10.28□□□□□ -0.76
VPS52-212ENST00000445902 TMEM61Q8N0U2 210 aa10.28□□□□□ -0.76
VPS52-212ENST00000445902 PTPRQQ9UMZ3 2332 aa10.28□□□□□ -0.76
VPS52-212ENST00000445902 ID1P41134 155 aa10.28□□□□□ -0.76
VPS52-212ENST00000445902 TMEM95Q3KNT9 176 aa10.28□□□□□ -0.76
VPS52-212ENST00000445902 BRD3OSQ6XYD6 125 aa10.28□□□□□ -0.76
VPS52-212ENST00000445902 FAM104AQ969W3 186 aa10.28□□□□□ -0.76
VPS52-212ENST00000445902 NPFFO15130 113 aa10.27□□□□□ -0.76
VPS52-212ENST00000445902 LINC00694P0DN24 101 aa10.27□□□□□ -0.76
VPS52-212ENST00000445902 SMCR5Q8TEV8 140 aa10.27□□□□□ -0.76
VPS52-212ENST00000445902 Q9UF83 564 aa10.27□□□□□ -0.76
VPS52-212ENST00000445902 IGHV1-58A0A0C4DH39 117 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms