RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 TRAPPC1Q9Y5R8 145 aa12.16□□□□□ -0.46
SGCE-206ENST00000445866 GAS8-AS1O95177 125 aa12.15□□□□□ -0.46
SGCE-206ENST00000445866 NCR2O95944 276 aa12.15□□□□□ -0.46
SGCE-206ENST00000445866 MT-ND6P03923 174 aa12.15□□□□□ -0.46
SGCE-206ENST00000445866 ZNRF2Q8NHG8 242 aa12.15□□□□□ -0.46
SGCE-206ENST00000445866 NIT2Q9NQR4 276 aa12.15□□□□□ -0.46
SGCE-206ENST00000445866 TNFRSF18Q9Y5U5 241 aa12.15□□□□□ -0.46
SGCE-206ENST00000445866 DNAH7Q8WXX0 4024 aa12.15□□□□□ -0.47
SGCE-206ENST00000445866 RPL36AP83881 106 aaKnown RBP12.14□□□□□ -0.47
SGCE-206ENST00000445866 MRPL23Q16540 153 aaKnown RBP12.14□□□□□ -0.47
SGCE-206ENST00000445866 KIAA1644Q3SXP7 199 aa12.14□□□□□ -0.47
SGCE-206ENST00000445866 NEXN-AS1Q8NBZ9 246 aa12.14□□□□□ -0.47
SGCE-206ENST00000445866 RPL36ALQ969Q0 106 aaKnown RBP12.14□□□□□ -0.47
SGCE-206ENST00000445866 MRPL18Q9H0U6 180 aaKnown RBP12.14□□□□□ -0.47
SGCE-206ENST00000445866 ICOSQ9Y6W8 199 aa12.14□□□□□ -0.47
SGCE-206ENST00000445866 D6R8Y8 96 aa12.13□□□□□ -0.47
SGCE-206ENST00000445866 PPBPP02775 128 aa12.13□□□□□ -0.47
SGCE-206ENST00000445866 RPS10P46783 165 aaKnown RBP12.13□□□□□ -0.47
SGCE-206ENST00000445866 RPL39LQ96EH5 51 aaKnown RBP12.13□□□□□ -0.47
SGCE-206ENST00000445866 TRBV7-3A0A075B6L6 115 aa12.13□□□□□ -0.47
SGCE-206ENST00000445866 A0A096LPF7 62 aa12.13□□□□□ -0.47
SGCE-206ENST00000445866 ORMDL3Q8N138 153 aa12.13□□□□□ -0.47
SGCE-206ENST00000445866 C15orf53Q8NAA6 179 aa12.13□□□□□ -0.47
SGCE-206ENST00000445866 DNAJC30Q96LL9 226 aa12.13□□□□□ -0.47
SGCE-206ENST00000445866 PPP1R17O96001 155 aa12.12□□□□□ -0.47
SGCE-206ENST00000445866 RAB5AP20339 215 aa12.12□□□□□ -0.47
SGCE-206ENST00000445866 SRIP30626 198 aa12.12□□□□□ -0.47
SGCE-206ENST00000445866 OR10J3Q5JRS4 329 aa12.12□□□□□ -0.47
SGCE-206ENST00000445866 C3orf84H3BNL1 204 aa12.11□□□□□ -0.47
SGCE-206ENST00000445866 PRELID3AQ96N28 172 aa12.11□□□□□ -0.47
SGCE-206ENST00000445866 NRACQ8N912 160 aa12.1□□□□□ -0.47
SGCE-206ENST00000445866 ST20Q9HBF5 79 aa12.1□□□□□ -0.47
SGCE-206ENST00000445866 TNFRSF6BO95407 300 aa12.1□□□□□ -0.47
SGCE-206ENST00000445866 NEGR1Q7Z3B1 354 aa12.1□□□□□ -0.47
SGCE-206ENST00000445866 SH2D6Q7Z4S9 175 aa12.1□□□□□ -0.47
SGCE-206ENST00000445866 ATP6V0E2Q8NHE4 81 aa12.1□□□□□ -0.47
SGCE-206ENST00000445866 UBE2D3P61077 147 aa12.09□□□□□ -0.47
SGCE-206ENST00000445866 UBE2D2P62837 147 aa12.09□□□□□ -0.47
SGCE-206ENST00000445866 CASC10Q5T4H9 136 aa12.09□□□□□ -0.47
SGCE-206ENST00000445866 APLNQ9ULZ1 77 aa12.09□□□□□ -0.47
SGCE-206ENST00000445866 TRBV6-5A0A0K0K1A5 114 aa12.08□□□□□ -0.48
SGCE-206ENST00000445866 TCTAP57738 103 aa12.08□□□□□ -0.48
SGCE-206ENST00000445866 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.08□□□□□ -0.48
SGCE-206ENST00000445866 IGHV3-38A0A0C4DH36 116 aa12.07□□□□□ -0.48
SGCE-206ENST00000445866 SDHAF1A6NFY7 115 aa12.07□□□□□ -0.48
SGCE-206ENST00000445866 NPYP01303 97 aa12.07□□□□□ -0.48
SGCE-206ENST00000445866 TRGC2P03986 189 aa12.07□□□□□ -0.48
SGCE-206ENST00000445866 DAZ4Q86SG3 579 aaKnown RBP12.06□□□□□ -0.48
SGCE-206ENST00000445866 C20orf78Q9BR46 151 aa12.06□□□□□ -0.48
SGCE-206ENST00000445866 ALKBH7Q9BT30 221 aaPredicted RBP12.06□□□□□ -0.48
SGCE-206ENST00000445866 DAZ3Q9NR90 486 aaKnown RBP12.06□□□□□ -0.48
SGCE-206ENST00000445866 LAMTOR2Q9Y2Q5 125 aa12.06□□□□□ -0.48
SGCE-206ENST00000445866 DYNC2H1Q8NCM8 4307 aaKnown RBP12.06□□□□□ -0.48
SGCE-206ENST00000445866 PHOX2AO14813 284 aa12.06□□□□□ -0.48
SGCE-206ENST00000445866 PMCHP20382 165 aa12.06□□□□□ -0.48
SGCE-206ENST00000445866 SUMO2P61956 95 aaKnown RBP12.06□□□□□ -0.48
SGCE-206ENST00000445866 DEFB104AQ8WTQ1 72 aa12.06□□□□□ -0.48
SGCE-206ENST00000445866 LOC389332A0A1B0GUA5 103 aa12.05□□□□□ -0.48
SGCE-206ENST00000445866 VCYO14598 125 aa12.05□□□□□ -0.48
SGCE-206ENST00000445866 LINC00694P0DN24 101 aa12.05□□□□□ -0.48
SGCE-206ENST00000445866 POLR2KP53803 58 aaKnown RBP12.05□□□□□ -0.48
SGCE-206ENST00000445866 ESRGQ1W209 222 aa12.05□□□□□ -0.48
SGCE-206ENST00000445866 LYPD5Q6UWN5 251 aa12.05□□□□□ -0.48
SGCE-206ENST00000445866 TMEM70Q9BUB7 260 aa12.05□□□□□ -0.48
SGCE-206ENST00000445866 GTSF1LQ9H1H1 148 aa12.05□□□□□ -0.48
SGCE-206ENST00000445866 CSMD3Q7Z407 3707 aa12.03□□□□□ -0.48
SGCE-206ENST00000445866 MAP1LC3AQ9H492 121 aa12.03□□□□□ -0.48
SGCE-206ENST00000445866 I3L3M4 83 aa12.03□□□□□ -0.48
SGCE-206ENST00000445866 CCL18P55774 89 aa12.03□□□□□ -0.48
SGCE-206ENST00000445866 TRBV27A0A0K0K1C4 114 aa12.01□□□□□ -0.49
SGCE-206ENST00000445866 COTL1Q14019 142 aa12.01□□□□□ -0.49
SGCE-206ENST00000445866 PRSS47A8MTI9 375 aa12□□□□□ -0.49
SGCE-206ENST00000445866 RPL32P62910 135 aaKnown RBP12□□□□□ -0.49
SGCE-206ENST00000445866 PRSS3P2Q8NHM4 247 aa12□□□□□ -0.49
SGCE-206ENST00000445866 KIR2DL4Q99706 377 aa12□□□□□ -0.49
SGCE-206ENST00000445866 SMIM2Q9BVW6 85 aa12□□□□□ -0.49
SGCE-206ENST00000445866 STARD9Q9P2P6 4700 aa12□□□□□ -0.49
SGCE-206ENST00000445866 PLECQ15149 4684 aaKnown RBP12□□□□□ -0.49
SGCE-206ENST00000445866 NACAE9PAV3 2078 aa12□□□□□ -0.49
SGCE-206ENST00000445866 TIRAPP58753 221 aa12□□□□□ -0.49
SGCE-206ENST00000445866 TMEM97Q5BJF2 176 aa12□□□□□ -0.49
SGCE-206ENST00000445866 TRBV6-8A0A0A6YYG3 113 aa11.99□□□□□ -0.49
SGCE-206ENST00000445866 FCER1GP30273 86 aa11.99□□□□□ -0.49
SGCE-206ENST00000445866 IFI27P40305 119 aaPredicted RBP11.99□□□□□ -0.49
SGCE-206ENST00000445866 NTM-AS1Q6ZSK4 140 aa11.99□□□□□ -0.49
SGCE-206ENST00000445866 LINC00588Q9Y4M8 146 aa11.99□□□□□ -0.49
SGCE-206ENST00000445866 IQCJQ1A5X6 159 aa11.98□□□□□ -0.49
SGCE-206ENST00000445866 LELP1Q5T871 98 aa11.98□□□□□ -0.49
SGCE-206ENST00000445866 Q8N8P6 123 aa11.98□□□□□ -0.49
SGCE-206ENST00000445866 TCAPO15273 167 aa11.97□□□□□ -0.49
SGCE-206ENST00000445866 TSHBP01222 138 aa11.97□□□□□ -0.49
SGCE-206ENST00000445866 UBE2DNLQ8IWF7 75 aa11.97□□□□□ -0.49
SGCE-206ENST00000445866 C18orf32Q8TCD1 76 aa11.97□□□□□ -0.49
SGCE-206ENST00000445866 NXT2Q9NPJ8 142 aaKnown RBP11.97□□□□□ -0.49
SGCE-206ENST00000445866 TRAV8-6A0A0B4J262 113 aa11.97□□□□□ -0.49
SGCE-206ENST00000445866 TENM2Q9NT68 2774 aa11.96□□□□□ -0.49
SGCE-206ENST00000445866 IGLV2-18A0A075B6J9 118 aa11.96□□□□□ -0.5
SGCE-206ENST00000445866 TRBV25-1A0A075B6N4 114 aa11.96□□□□□ -0.5
SGCE-206ENST00000445866 IGHV1-24A0A0C4DH33 117 aa11.96□□□□□ -0.5
SGCE-206ENST00000445866 AMTP48728 403 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms