RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 SAMD5Q5TGI4 173 aa13.08□□□□□ -0.32
CLDN9-201ENST00000445369 HIST2H2BCQ6DN03 193 aa13.08□□□□□ -0.32
CLDN9-201ENST00000445369 HIST1H4GQ99525 98 aa13.08□□□□□ -0.32
CLDN9-201ENST00000445369 EDA2RQ9HAV5 297 aa13.08□□□□□ -0.32
CLDN9-201ENST00000445369 ABCA12Q86UK0 2595 aa13.07□□□□□ -0.32
CLDN9-201ENST00000445369 ZNF469Q96JG9 3925 aaPredicted RBP13.07□□□□□ -0.32
CLDN9-201ENST00000445369 Q6ZSV7 163 aa13.07□□□□□ -0.32
CLDN9-201ENST00000445369 SPAG8Q99932 426 aaPredicted RBP13.07□□□□□ -0.32
CLDN9-201ENST00000445369 MAP6D1Q9H9H5 199 aa13.07□□□□□ -0.32
CLDN9-201ENST00000445369 DYNLRB2Q8TF09 96 aa13.06□□□□□ -0.32
CLDN9-201ENST00000445369 SPCS1Q9Y6A9 102 aa13.06□□□□□ -0.32
CLDN9-201ENST00000445369 TEX15Q9BXT5 2789 aa13.06□□□□□ -0.32
CLDN9-201ENST00000445369 J3QKU1 62 aa13.06□□□□□ -0.32
CLDN9-201ENST00000445369 P0DMU3 169 aa13.06□□□□□ -0.32
CLDN9-201ENST00000445369 FAM231AP0DMU4 169 aa13.06□□□□□ -0.32
CLDN9-201ENST00000445369 FAM231CP0DMU5 169 aa13.06□□□□□ -0.32
CLDN9-201ENST00000445369 FABP2P12104 132 aa13.06□□□□□ -0.32
CLDN9-201ENST00000445369 EMP1P54849 157 aa13.06□□□□□ -0.32
CLDN9-201ENST00000445369 CBY1Q9Y3M2 126 aa13.06□□□□□ -0.32
CLDN9-201ENST00000445369 I3L3M4 83 aa13.05□□□□□ -0.32
CLDN9-201ENST00000445369 DEFB114Q30KQ6 69 aa13.05□□□□□ -0.32
CLDN9-201ENST00000445369 WFDC11Q8NEX6 87 aa13.05□□□□□ -0.32
CLDN9-201ENST00000445369 ZNF815PA8K554 130 aa13.04□□□□□ -0.32
CLDN9-201ENST00000445369 HTN1P15515 57 aa13.04□□□□□ -0.32
CLDN9-201ENST00000445369 CD300EQ496F6 205 aaPredicted RBP13.04□□□□□ -0.32
CLDN9-201ENST00000445369 OCIAD2Q56VL3 154 aa13.04□□□□□ -0.32
CLDN9-201ENST00000445369 HIST2H2BDQ6DRA6 164 aa13.04□□□□□ -0.32
CLDN9-201ENST00000445369 OR5A1Q8NGJ0 315 aa13.04□□□□□ -0.32
CLDN9-201ENST00000445369 NACAE9PAV3 2078 aa13.04□□□□□ -0.32
CLDN9-201ENST00000445369 DNAJC9-AS1A6NH13 148 aa13.04□□□□□ -0.32
CLDN9-201ENST00000445369 HERVK_113P61574 105 aa13.04□□□□□ -0.32
CLDN9-201ENST00000445369 TEX29Q8N6K0 151 aa13.04□□□□□ -0.32
CLDN9-201ENST00000445369 C12orf74Q32Q52 190 aa13.03□□□□□ -0.32
CLDN9-201ENST00000445369 C20orf203Q8NBC4 194 aa13.03□□□□□ -0.32
CLDN9-201ENST00000445369 ZNRF2Q8NHG8 242 aa13.03□□□□□ -0.32
CLDN9-201ENST00000445369 PIK3CD-AS1Q5SR53 167 aa13.03□□□□□ -0.32
CLDN9-201ENST00000445369 AKAP9Q99996 3911 aa13.02□□□□□ -0.32
CLDN9-201ENST00000445369 TENM4Q6N022 2769 aa13.02□□□□□ -0.33
CLDN9-201ENST00000445369 A0A1B0GWB2 263 aa13.02□□□□□ -0.33
CLDN9-201ENST00000445369 M0R2P5 195 aa13.02□□□□□ -0.33
CLDN9-201ENST00000445369 ZNF415Q09FC8 603 aa13.02□□□□□ -0.33
CLDN9-201ENST00000445369 PLEKHB2Q96CS7 222 aa13.02□□□□□ -0.33
CLDN9-201ENST00000445369 PRM2P04554 102 aa13.01□□□□□ -0.33
CLDN9-201ENST00000445369 PTH2Q96A98 100 aa13.01□□□□□ -0.33
CLDN9-201ENST00000445369 LINC00467Q9BRT7 94 aa13.01□□□□□ -0.33
CLDN9-201ENST00000445369 APCP25054 2843 aa13.01□□□□□ -0.33
CLDN9-201ENST00000445369 A8MWV9 139 aa13.01□□□□□ -0.33
CLDN9-201ENST00000445369 IGLL5B9A064 214 aa13.01□□□□□ -0.33
CLDN9-201ENST00000445369 SCGB2A2Q13296 93 aa13.01□□□□□ -0.33
CLDN9-201ENST00000445369 NFE4Q86UQ8 179 aa13.01□□□□□ -0.33
CLDN9-201ENST00000445369 OPRPNQ99935 248 aaPredicted RBP13.01□□□□□ -0.33
CLDN9-201ENST00000445369 IGHV3-73A0A0B4J1V6 119 aa13□□□□□ -0.33
CLDN9-201ENST00000445369 PROK1P58294 105 aa13□□□□□ -0.33
CLDN9-201ENST00000445369 RAX2Q96IS3 184 aa13□□□□□ -0.33
CLDN9-201ENST00000445369 NBPF19A0A087WUL8 3843 aa13□□□□□ -0.33
CLDN9-201ENST00000445369 TMEM170BQ5T4T1 132 aa13□□□□□ -0.33
CLDN9-201ENST00000445369 SCGB1D4Q6XE38 83 aa13□□□□□ -0.33
CLDN9-201ENST00000445369 C11orf72Q8NBR9 251 aa13□□□□□ -0.33
CLDN9-201ENST00000445369 TSPEAR-AS2P59090 65 aa12.99□□□□□ -0.33
CLDN9-201ENST00000445369 FHL3Q13643 280 aa12.99□□□□□ -0.33
CLDN9-201ENST00000445369 ESM1Q9NQ30 184 aa12.99□□□□□ -0.33
CLDN9-201ENST00000445369 INSP01308 110 aa12.98□□□□□ -0.33
CLDN9-201ENST00000445369 CLUHP3Q96NS8 147 aa12.98□□□□□ -0.33
CLDN9-201ENST00000445369 IGLV4-3A0A075B6K6 122 aa12.98□□□□□ -0.33
CLDN9-201ENST00000445369 ZNF479Q96JC4 524 aa12.98□□□□□ -0.33
CLDN9-201ENST00000445369 ODF3L2Q3SX64 289 aa12.97□□□□□ -0.33
CLDN9-201ENST00000445369 LINC01587Q99440 93 aa12.97□□□□□ -0.33
CLDN9-201ENST00000445369 ITPR3Q14573 2671 aa12.97□□□□□ -0.33
CLDN9-201ENST00000445369 TRAV25A0A0B4J276 109 aa12.97□□□□□ -0.33
CLDN9-201ENST00000445369 A0A0J9YY99 117 aa12.97□□□□□ -0.33
CLDN9-201ENST00000445369 CFAP126Q5VTH2 177 aa12.97□□□□□ -0.33
CLDN9-201ENST00000445369 RNF151Q2KHN1 245 aa12.96□□□□□ -0.33
CLDN9-201ENST00000445369 K7ERU9 68 aa12.95□□□□□ -0.34
CLDN9-201ENST00000445369 RRN3P1Q2M238 152 aa12.95□□□□□ -0.34
CLDN9-201ENST00000445369 Q6ZSN1 163 aa12.95□□□□□ -0.34
CLDN9-201ENST00000445369 AMELXQ99217 191 aa12.95□□□□□ -0.34
CLDN9-201ENST00000445369 SPXQ9BT56 116 aa12.95□□□□□ -0.34
CLDN9-201ENST00000445369 PYGO1Q9Y3Y4 419 aa12.95□□□□□ -0.34
CLDN9-201ENST00000445369 TNFRSF18Q9Y5U5 241 aa12.95□□□□□ -0.34
CLDN9-201ENST00000445369 MYO9AB2RTY4 2548 aa12.95□□□□□ -0.34
CLDN9-201ENST00000445369 TMEM223A0PJW6 202 aa12.95□□□□□ -0.34
CLDN9-201ENST00000445369 CD28P10747 220 aa12.95□□□□□ -0.34
CLDN9-201ENST00000445369 BEAN1Q3B7T3 259 aa12.95□□□□□ -0.34
CLDN9-201ENST00000445369 C11orf44Q8N8P7 122 aa12.95□□□□□ -0.34
CLDN9-201ENST00000445369 A0A1W2PRX2 142 aa12.94□□□□□ -0.34
CLDN9-201ENST00000445369 J3QQQ9 107 aa12.94□□□□□ -0.34
CLDN9-201ENST00000445369 CCL24O00175 119 aa12.94□□□□□ -0.34
CLDN9-201ENST00000445369 RHODO00212 210 aa12.94□□□□□ -0.34
CLDN9-201ENST00000445369 KRTAP1-1Q07627 177 aa12.94□□□□□ -0.34
CLDN9-201ENST00000445369 FAM104AQ969W3 186 aa12.94□□□□□ -0.34
CLDN9-201ENST00000445369 Q9UF83 564 aa12.94□□□□□ -0.34
CLDN9-201ENST00000445369 HELZ2Q9BYK8 2649 aaKnown RBP12.94□□□□□ -0.34
CLDN9-201ENST00000445369 TMEM238LA0A1B0GVL6 79 aa12.93□□□□□ -0.34
CLDN9-201ENST00000445369 A6NJY4 79 aa12.93□□□□□ -0.34
CLDN9-201ENST00000445369 SAP30O75446 220 aa12.93□□□□□ -0.34
CLDN9-201ENST00000445369 ZNF22P17026 224 aaPredicted RBP12.93□□□□□ -0.34
CLDN9-201ENST00000445369 SRSF9Q13242 221 aaKnown RBP eCLIP12.93□□□□□ -0.34
CLDN9-201ENST00000445369 VCX2Q9H322 139 aa12.93□□□□□ -0.34
CLDN9-201ENST00000445369 SPANXB1Q9NS25 103 aaPredicted RBP12.93□□□□□ -0.34
CLDN9-201ENST00000445369 MRPL16Q9NX20 251 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms