RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 TRGV1A0A0A0MS02 117 aa3.91□□□□□ -1.78
SCN11A-202ENST00000444237 NDUFA4O00483 81 aa3.91□□□□□ -1.78
SCN11A-202ENST00000444237 VPREB1P12018 145 aa3.91□□□□□ -1.78
SCN11A-202ENST00000444237 PLA2G2AP14555 144 aa3.91□□□□□ -1.78
SCN11A-202ENST00000444237 VMO1Q7Z5L0 202 aa3.91□□□□□ -1.78
SCN11A-202ENST00000444237 K7ENP7 123 aa3.91□□□□□ -1.78
SCN11A-202ENST00000444237 NCR3O14931 201 aa3.91□□□□□ -1.78
SCN11A-202ENST00000444237 NDUFS5O43920 106 aa3.91□□□□□ -1.78
SCN11A-202ENST00000444237 LY6EQ16553 131 aa3.91□□□□□ -1.78
SCN11A-202ENST00000444237 SOSTDC1Q6X4U4 206 aa3.91□□□□□ -1.78
SCN11A-202ENST00000444237 FAM19A3Q7Z5A8 133 aa3.91□□□□□ -1.78
SCN11A-202ENST00000444237 A0A087WVE0 104 aa3.91□□□□□ -1.78
SCN11A-202ENST00000444237 BCE1O60756 84 aa3.91□□□□□ -1.78
SCN11A-202ENST00000444237 RNASE6Q93091 150 aaKnown RBP3.91□□□□□ -1.78
SCN11A-202ENST00000444237 FAM27E3Q08E93 113 aa3.9□□□□□ -1.78
SCN11A-202ENST00000444237 CCL19Q99731 98 aa3.9□□□□□ -1.78
SCN11A-202ENST00000444237 KLK9Q9UKQ9 250 aa3.9□□□□□ -1.78
SCN11A-202ENST00000444237 PTPRZ1P23471 2315 aaPredicted RBP3.9□□□□□ -1.78
SCN11A-202ENST00000444237 IGHV3-38A0A0C4DH36 116 aa3.9□□□□□ -1.78
SCN11A-202ENST00000444237 STHQ8IWL8 128 aa3.9□□□□□ -1.78
SCN11A-202ENST00000444237 MIR7-3HGQ8N6C7 128 aa3.9□□□□□ -1.78
SCN11A-202ENST00000444237 LINC01560Q8TB33 94 aa3.9□□□□□ -1.78
SCN11A-202ENST00000444237 PRAC2D3DTV9 90 aa3.9□□□□□ -1.79
SCN11A-202ENST00000444237 NDUFB1O75438 58 aa3.9□□□□□ -1.79
SCN11A-202ENST00000444237 IGLV2-23P01705 113 aa3.9□□□□□ -1.79
SCN11A-202ENST00000444237 PCDH15Q96QU1 1955 aa3.9□□□□□ -1.79
SCN11A-202ENST00000444237 DNAJC13O75165 2243 aa3.9□□□□□ -1.79
SCN11A-202ENST00000444237 TRBV27A0A0K0K1C4 114 aa3.9□□□□□ -1.79
SCN11A-202ENST00000444237 CCKP06307 115 aa3.9□□□□□ -1.79
SCN11A-202ENST00000444237 CEMP1Q6PRD7 247 aaPredicted RBP3.9□□□□□ -1.79
SCN11A-202ENST00000444237 IGLV11-55A0A075B6I3 123 aa3.9□□□□□ -1.79
SCN11A-202ENST00000444237 PLAC8L1A1L4L8 177 aa3.9□□□□□ -1.79
SCN11A-202ENST00000444237 A6NED7 52 aa3.9□□□□□ -1.79
SCN11A-202ENST00000444237 CHKB-CPT1BH3BT56 60 aa3.9□□□□□ -1.79
SCN11A-202ENST00000444237 CRYGDP07320 174 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 EBI3Q14213 229 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 SPINK13Q1W4C9 94 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 LYPD2Q6UXB3 125 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 ADAMTS9Q9P2N4 1935 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 PCNX3Q9H6A9 2034 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 SVILO95425 2214 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 USF3Q68DE3 2245 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 IGLV4-3A0A075B6K6 122 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 Q0VFX4 171 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 ESRGQ1W209 222 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 HIGD2BQ4VC39 106 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 SDK2Q58EX2 2172 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 IGHV4-4A0A075B6R2 117 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 TRBV10-3A0A0K0K1G6 114 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 ZNF318Q5VUA4 2279 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 BPY2O14599 106 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 CD164Q04900 197 aa3.89□□□□□ -1.79
SCN11A-202ENST00000444237 E7EUB6 86 aa3.88□□□□□ -1.79
SCN11A-202ENST00000444237 ATP6V0E1O15342 81 aa3.88□□□□□ -1.79
SCN11A-202ENST00000444237 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.88□□□□□ -1.79
SCN11A-202ENST00000444237 LINC01546A6NGU7 62 aa3.88□□□□□ -1.79
SCN11A-202ENST00000444237 IGLV1-44P01699 117 aa3.88□□□□□ -1.79
SCN11A-202ENST00000444237 CTSGP08311 255 aa3.88□□□□□ -1.79
SCN11A-202ENST00000444237 TRBV6-5A0A0K0K1A5 114 aa3.88□□□□□ -1.79
SCN11A-202ENST00000444237 LHBP01229 141 aa3.88□□□□□ -1.79
SCN11A-202ENST00000444237 FHL3Q13643 280 aa3.88□□□□□ -1.79
SCN11A-202ENST00000444237 A8MZ25 164 aa3.88□□□□□ -1.79
SCN11A-202ENST00000444237 PRYO14603 147 aa3.88□□□□□ -1.79
SCN11A-202ENST00000444237 IGLV3-9A0A075B6K5 115 aa3.88□□□□□ -1.79
SCN11A-202ENST00000444237 OVOL3O00110 214 aa3.88□□□□□ -1.79
SCN11A-202ENST00000444237 IGHV3-53P01767 116 aa3.88□□□□□ -1.79
SCN11A-202ENST00000444237 KIAA1549LQ6ZVL6 1849 aa3.87□□□□□ -1.79
SCN11A-202ENST00000444237 IGHV3-16A0A0C4DH30 117 aa3.87□□□□□ -1.79
SCN11A-202ENST00000444237 FAM19A4Q96LR4 140 aa3.87□□□□□ -1.79
SCN11A-202ENST00000444237 KAAG1Q9UBP8 84 aa3.87□□□□□ -1.79
SCN11A-202ENST00000444237 ZDBF2Q9HCK1 2354 aa3.87□□□□□ -1.79
SCN11A-202ENST00000444237 IGLV4-69A0A075B6H9 119 aa3.87□□□□□ -1.79
SCN11A-202ENST00000444237 IGHV7-4-1A0A0J9YVY3 117 aa3.87□□□□□ -1.79
SCN11A-202ENST00000444237 CDK2AP2O75956 126 aa3.87□□□□□ -1.79
SCN11A-202ENST00000444237 CMC4P56277 68 aaPredicted RBP3.87□□□□□ -1.79
SCN11A-202ENST00000444237 ZNF843Q8N446 348 aa3.87□□□□□ -1.79
SCN11A-202ENST00000444237 DSCAML1Q8TD84 2053 aa3.87□□□□□ -1.79
SCN11A-202ENST00000444237 IGHV4OR15-8A0A075B7B6 117 aa3.87□□□□□ -1.79
SCN11A-202ENST00000444237 A0A087WW49 117 aa3.87□□□□□ -1.79
SCN11A-202ENST00000444237 BRI3O95415 125 aa3.87□□□□□ -1.79
SCN11A-202ENST00000444237 HOXB4P17483 251 aaPredicted RBP3.87□□□□□ -1.79
SCN11A-202ENST00000444237 DEFB121Q5J5C9 76 aa3.87□□□□□ -1.79
SCN11A-202ENST00000444237 NPBQ8NG41 125 aa3.87□□□□□ -1.79
SCN11A-202ENST00000444237 IGIPA6NJ69 53 aa3.87□□□□□ -1.79
SCN11A-202ENST00000444237 ZNF561-AS1K7EIQ3 104 aa3.87□□□□□ -1.79
SCN11A-202ENST00000444237 UTRNP46939 3433 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 ASXL3Q9C0F0 2248 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 LINC00574Q9H8X3 128 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 TANC2Q9HCD6 1990 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 IGLV2-18A0A075B6J9 118 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 GAS8-AS1O95177 125 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 TSPEAR-AS2P59090 65 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 PIP4P2Q8N4L2 257 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 MDS2Q8NDY4 140 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 CDKN2A-AS1Q9UH64 79 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 HCFC1P51610 2035 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 SLPIP03973 132 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 LINC00336Q6ZUF6 198 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 ARFGEF3Q5TH69 2177 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 CGB3P0DN86 165 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms