RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 GHRHP01286 108 aa10.61□□□□□ -0.71
SMARCA4-204ENST00000444061 C6orf226Q5I0X4 101 aa10.61□□□□□ -0.71
SMARCA4-204ENST00000444061 RBMY1BA6NDE4 496 aaKnown RBP10.61□□□□□ -0.71
SMARCA4-204ENST00000444061 RBMY1EA6NEQ0 496 aaKnown RBP10.61□□□□□ -0.71
SMARCA4-204ENST00000444061 ANGP03950 147 aaKnown RBP10.61□□□□□ -0.71
SMARCA4-204ENST00000444061 RBMY1DP0C7P1 496 aaKnown RBP10.61□□□□□ -0.71
SMARCA4-204ENST00000444061 RBMY1A1P0DJD3 496 aaKnown RBP10.61□□□□□ -0.71
SMARCA4-204ENST00000444061 RBMY1CP0DJD4 496 aa10.61□□□□□ -0.71
SMARCA4-204ENST00000444061 C2orf66Q6UXQ4 117 aa10.61□□□□□ -0.71
SMARCA4-204ENST00000444061 IGHV3-64A0A075B6Q5 118 aa10.61□□□□□ -0.71
SMARCA4-204ENST00000444061 NEGR1Q7Z3B1 354 aa10.61□□□□□ -0.71
SMARCA4-204ENST00000444061 Q8N8P6 123 aa10.61□□□□□ -0.71
SMARCA4-204ENST00000444061 C11orf45Q8TAV5 145 aa10.61□□□□□ -0.71
SMARCA4-204ENST00000444061 LAMA2P24043 3122 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-204ENST00000444061 RASL10AQ92737 203 aa10.6□□□□□ -0.71
SMARCA4-204ENST00000444061 SIGLEC8Q9NYZ4 499 aa10.6□□□□□ -0.71
SMARCA4-204ENST00000444061 A0A1W2PPM0 123 aa10.6□□□□□ -0.71
SMARCA4-204ENST00000444061 ODF3Q96PU9 254 aa10.6□□□□□ -0.71
SMARCA4-204ENST00000444061 SMIM2Q9BVW6 85 aa10.6□□□□□ -0.71
SMARCA4-204ENST00000444061 ATP6V0E2Q8NHE4 81 aa10.6□□□□□ -0.71
SMARCA4-204ENST00000444061 SMIM9A6NGZ8 99 aa10.59□□□□□ -0.71
SMARCA4-204ENST00000444061 F8W735 103 aaPredicted RBP10.59□□□□□ -0.71
SMARCA4-204ENST00000444061 PPDPFLQ8WWR9 84 aa10.59□□□□□ -0.71
SMARCA4-204ENST00000444061 BOD1L2Q8IYS8 172 aa10.59□□□□□ -0.71
SMARCA4-204ENST00000444061 USP24Q9UPU5 2620 aa10.59□□□□□ -0.71
SMARCA4-204ENST00000444061 C20orf78Q9BR46 151 aa10.58□□□□□ -0.72
SMARCA4-204ENST00000444061 K7EQD1 137 aa10.58□□□□□ -0.72
SMARCA4-204ENST00000444061 HHLA3Q9XRX5 114 aa10.58□□□□□ -0.72
SMARCA4-204ENST00000444061 PROK1P58294 105 aa10.58□□□□□ -0.72
SMARCA4-204ENST00000444061 TRBV6-1A0A0K0K1D8 114 aa10.58□□□□□ -0.72
SMARCA4-204ENST00000444061 A0A0U1RRA0 63 aa10.58□□□□□ -0.72
SMARCA4-204ENST00000444061 NPYP01303 97 aa10.58□□□□□ -0.72
SMARCA4-204ENST00000444061 PRB2P02812 416 aaPredicted RBP10.57□□□□□ -0.72
SMARCA4-204ENST00000444061 LINC00158P58513 81 aa10.57□□□□□ -0.72
SMARCA4-204ENST00000444061 C20orf173Q96LM9 149 aa10.57□□□□□ -0.72
SMARCA4-204ENST00000444061 GAGE12HA6NDE8 117 aa10.57□□□□□ -0.72
SMARCA4-204ENST00000444061 IGLL5B9A064 214 aa10.57□□□□□ -0.72
SMARCA4-204ENST00000444061 ZNF561-AS1K7EIQ3 104 aa10.57□□□□□ -0.72
SMARCA4-204ENST00000444061 MDFICQ9P1T7 246 aa10.57□□□□□ -0.72
SMARCA4-204ENST00000444061 C2orf82Q6UX34 121 aa10.57□□□□□ -0.72
SMARCA4-204ENST00000444061 FAM110AQ9BQ89 295 aa10.57□□□□□ -0.72
SMARCA4-204ENST00000444061 CCL25O15444 150 aa10.57□□□□□ -0.72
SMARCA4-204ENST00000444061 BRI3O95415 125 aa10.56□□□□□ -0.72
SMARCA4-204ENST00000444061 DNAJC30Q96LL9 226 aa10.56□□□□□ -0.72
SMARCA4-204ENST00000444061 MED14OSP0DP75 135 aa10.56□□□□□ -0.72
SMARCA4-204ENST00000444061 OVOL2Q9BRP0 275 aa10.55□□□□□ -0.72
SMARCA4-204ENST00000444061 FAM222AQ5U5X8 452 aa10.55□□□□□ -0.72
SMARCA4-204ENST00000444061 WFDC10AQ9H1F0 79 aa10.55□□□□□ -0.72
SMARCA4-204ENST00000444061 MSRB1Q9NZV6 116 aa10.55□□□□□ -0.72
SMARCA4-204ENST00000444061 PRO0255Q9UI72 69 aa10.55□□□□□ -0.72
SMARCA4-204ENST00000444061 Q6ZQT7 251 aa10.55□□□□□ -0.72
SMARCA4-204ENST00000444061 TMEM141Q96I45 108 aa10.55□□□□□ -0.72
SMARCA4-204ENST00000444061 UBE2WQ96B02 151 aa10.55□□□□□ -0.72
SMARCA4-204ENST00000444061 Q9HAA7 133 aa10.55□□□□□ -0.72
SMARCA4-204ENST00000444061 IGKV2D-24A0A075B6R9 120 aa10.54□□□□□ -0.72
SMARCA4-204ENST00000444061 MIFP14174 115 aa10.54□□□□□ -0.72
SMARCA4-204ENST00000444061 ZNF747Q9BV97 191 aa10.54□□□□□ -0.72
SMARCA4-204ENST00000444061 SUMO4Q6EEV6 95 aa10.54□□□□□ -0.72
SMARCA4-204ENST00000444061 ETDBQ3ZM63 59 aa10.54□□□□□ -0.72
SMARCA4-204ENST00000444061 LYRM9A8MSI8 78 aa10.53□□□□□ -0.72
SMARCA4-204ENST00000444061 S100A7L2Q5SY68 101 aa10.53□□□□□ -0.72
SMARCA4-204ENST00000444061 SPANXCQ9NY87 97 aa10.53□□□□□ -0.72
SMARCA4-204ENST00000444061 CLPSL2Q6UWE3 100 aa10.53□□□□□ -0.72
SMARCA4-204ENST00000444061 GDF5OSQ5U4N7 250 aa10.53□□□□□ -0.72
SMARCA4-204ENST00000444061 KIR2DL5BQ8NHK3 375 aa10.53□□□□□ -0.72
SMARCA4-204ENST00000444061 CFAP46Q8IYW2 2715 aa10.52□□□□□ -0.72
SMARCA4-204ENST00000444061 IGLV1-51P01701 117 aa10.52□□□□□ -0.72
SMARCA4-204ENST00000444061 DAZ2Q13117 558 aaKnown RBP10.52□□□□□ -0.73
SMARCA4-204ENST00000444061 DAZ4Q86SG3 579 aaKnown RBP10.52□□□□□ -0.73
SMARCA4-204ENST00000444061 CEND1Q8N111 149 aa10.52□□□□□ -0.73
SMARCA4-204ENST00000444061 DAZ3Q9NR90 486 aaKnown RBP10.52□□□□□ -0.73
SMARCA4-204ENST00000444061 C1orf43Q9BWL3 253 aa10.52□□□□□ -0.73
SMARCA4-204ENST00000444061 C9JAW5 83 aa10.52□□□□□ -0.73
SMARCA4-204ENST00000444061 Q6ZTI0 123 aa10.52□□□□□ -0.73
SMARCA4-204ENST00000444061 TIMM21Q9BVV7 248 aa10.51□□□□□ -0.73
SMARCA4-204ENST00000444061 MYMXA0A1B0GTQ4 84 aa10.51□□□□□ -0.73
SMARCA4-204ENST00000444061 ZNF80P51504 273 aaPredicted RBP10.51□□□□□ -0.73
SMARCA4-204ENST00000444061 PMVKQ15126 192 aa10.51□□□□□ -0.73
SMARCA4-204ENST00000444061 PRIMA1Q86XR5 153 aa10.51□□□□□ -0.73
SMARCA4-204ENST00000444061 Q8N2B8 174 aa10.51□□□□□ -0.73
SMARCA4-204ENST00000444061 TRBV7-3A0A075B6L6 115 aa10.51□□□□□ -0.73
SMARCA4-204ENST00000444061 TRAV4A0A0B4J268 109 aa10.51□□□□□ -0.73
SMARCA4-204ENST00000444061 IGHV4-30-4P0DP06 118 aa10.51□□□□□ -0.73
SMARCA4-204ENST00000444061 UNC80Q8N2C7 3258 aa10.5□□□□□ -0.73
SMARCA4-204ENST00000444061 GATA1P15976 413 aaPredicted RBP10.5□□□□□ -0.73
SMARCA4-204ENST00000444061 DCANP1Q8TF63 244 aa10.5□□□□□ -0.73
SMARCA4-204ENST00000444061 DEFB131BA0A096LNP1 70 aa10.5□□□□□ -0.73
SMARCA4-204ENST00000444061 RPL39LQ96EH5 51 aaKnown RBP10.5□□□□□ -0.73
SMARCA4-204ENST00000444061 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.5□□□□□ -0.73
SMARCA4-204ENST00000444061 IGKV2-29A2NJV5 120 aaPredicted RBP10.5□□□□□ -0.73
SMARCA4-204ENST00000444061 IGHV3-30P01768 117 aa10.49□□□□□ -0.73
SMARCA4-204ENST00000444061 IGHV3-33P01772 117 aa10.49□□□□□ -0.73
SMARCA4-204ENST00000444061 IGHV3-30-3P0DP02 117 aa10.49□□□□□ -0.73
SMARCA4-204ENST00000444061 IGHV3-30-5P0DP03 117 aa10.49□□□□□ -0.73
SMARCA4-204ENST00000444061 TP53TG3Q9ULZ0 132 aa10.49□□□□□ -0.73
SMARCA4-204ENST00000444061 CTRLP40313 264 aa10.49□□□□□ -0.73
SMARCA4-204ENST00000444061 KRTAP24-1Q3LI83 254 aa10.49□□□□□ -0.73
SMARCA4-204ENST00000444061 AMTNQ6UX39 209 aa10.49□□□□□ -0.73
SMARCA4-204ENST00000444061 RNASE8Q8TDE3 154 aaKnown RBP10.49□□□□□ -0.73
SMARCA4-204ENST00000444061 ZFAND2AQ8N6M9 145 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms