RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 LOC107984156A0A0G2JMH3 177 aa12.21□□□□□ -0.46
SEMA3B-207ENST00000441915 TSPEAR-AS2P59090 65 aa12.21□□□□□ -0.46
SEMA3B-207ENST00000441915 ARL17AQ8IVW1 177 aa12.21□□□□□ -0.46
SEMA3B-207ENST00000441915 DOPEY1Q5JWR5 2465 aa12.21□□□□□ -0.46
SEMA3B-207ENST00000441915 CSMD2Q7Z408 3487 aa12.2□□□□□ -0.46
SEMA3B-207ENST00000441915 J3QQQ9 107 aa12.2□□□□□ -0.46
SEMA3B-207ENST00000441915 XGP55808 180 aa12.2□□□□□ -0.46
SEMA3B-207ENST00000441915 SLC25A29Q8N8R3 303 aa12.2□□□□□ -0.46
SEMA3B-207ENST00000441915 LINC01356Q8N9X3 169 aa12.2□□□□□ -0.46
SEMA3B-207ENST00000441915 SORL1Q92673 2214 aa12.2□□□□□ -0.46
SEMA3B-207ENST00000441915 LGALS3P17931 250 aaKnown RBP12.2□□□□□ -0.46
SEMA3B-207ENST00000441915 NFE4Q86UQ8 179 aa12.2□□□□□ -0.46
SEMA3B-207ENST00000441915 DOPEY2Q9Y3R5 2298 aa12.19□□□□□ -0.46
SEMA3B-207ENST00000441915 NDUFA11Q86Y39 141 aa12.19□□□□□ -0.46
SEMA3B-207ENST00000441915 CFAP46Q8IYW2 2715 aa12.19□□□□□ -0.46
SEMA3B-207ENST00000441915 I3L3M4 83 aa12.19□□□□□ -0.46
SEMA3B-207ENST00000441915 GAGE5Q13069 117 aa12.19□□□□□ -0.46
SEMA3B-207ENST00000441915 GAGE6Q13070 117 aa12.19□□□□□ -0.46
SEMA3B-207ENST00000441915 LYRM7Q5U5X0 104 aa12.19□□□□□ -0.46
SEMA3B-207ENST00000441915 DUX5Q96PT3 197 aa12.19□□□□□ -0.46
SEMA3B-207ENST00000441915 TRGV11A0A075B6L2 103 aa12.18□□□□□ -0.46
SEMA3B-207ENST00000441915 IGHV3-30P01768 117 aa12.18□□□□□ -0.46
SEMA3B-207ENST00000441915 P0DMU3 169 aa12.18□□□□□ -0.46
SEMA3B-207ENST00000441915 FAM231AP0DMU4 169 aa12.18□□□□□ -0.46
SEMA3B-207ENST00000441915 FAM231CP0DMU5 169 aa12.18□□□□□ -0.46
SEMA3B-207ENST00000441915 IGHV3-30-5P0DP03 117 aa12.18□□□□□ -0.46
SEMA3B-207ENST00000441915 SFTA2Q6UW10 78 aa12.18□□□□□ -0.46
SEMA3B-207ENST00000441915 C20orf203Q8NBC4 194 aa12.18□□□□□ -0.46
SEMA3B-207ENST00000441915 NRGNQ92686 78 aa12.18□□□□□ -0.46
SEMA3B-207ENST00000441915 OPRPNQ99935 248 aaPredicted RBP12.18□□□□□ -0.46
SEMA3B-207ENST00000441915 ANAPC13Q9BS18 74 aa12.18□□□□□ -0.46
SEMA3B-207ENST00000441915 FHL3Q13643 280 aa12.18□□□□□ -0.46
SEMA3B-207ENST00000441915 FLNCQ14315 2725 aa12.18□□□□□ -0.46
SEMA3B-207ENST00000441915 PSMB2P49721 201 aa12.17□□□□□ -0.46
SEMA3B-207ENST00000441915 UBE2D3P61077 147 aa12.17□□□□□ -0.46
SEMA3B-207ENST00000441915 UBE2D2P62837 147 aa12.17□□□□□ -0.46
SEMA3B-207ENST00000441915 CFAP126Q5VTH2 177 aa12.17□□□□□ -0.46
SEMA3B-207ENST00000441915 ELANEP08246 267 aa12.17□□□□□ -0.46
SEMA3B-207ENST00000441915 HOXD3P31249 432 aaPredicted RBP12.17□□□□□ -0.46
SEMA3B-207ENST00000441915 CREBBPQ92793 2442 aa12.17□□□□□ -0.46
SEMA3B-207ENST00000441915 SMCPP49901 116 aaPredicted RBP12.17□□□□□ -0.46
SEMA3B-207ENST00000441915 AMELXQ99217 191 aa12.17□□□□□ -0.46
SEMA3B-207ENST00000441915 TGFAP01135 160 aa12.16□□□□□ -0.46
SEMA3B-207ENST00000441915 USP9XQ93008 2570 aaPredicted RBP12.16□□□□□ -0.46
SEMA3B-207ENST00000441915 TMEM223A0PJW6 202 aa12.16□□□□□ -0.46
SEMA3B-207ENST00000441915 J3QLI3 93 aa12.16□□□□□ -0.46
SEMA3B-207ENST00000441915 CFC1BP0CG36 223 aa12.16□□□□□ -0.46
SEMA3B-207ENST00000441915 CFC1P0CG37 223 aa12.16□□□□□ -0.46
SEMA3B-207ENST00000441915 RNF152Q8N8N0 203 aa12.16□□□□□ -0.46
SEMA3B-207ENST00000441915 UBE2E2Q96LR5 201 aa12.16□□□□□ -0.46
SEMA3B-207ENST00000441915 VPREB3Q9UKI3 123 aa12.16□□□□□ -0.46
SEMA3B-207ENST00000441915 LEPROTO15243 131 aa12.15□□□□□ -0.46
SEMA3B-207ENST00000441915 VCX2Q9H322 139 aa12.15□□□□□ -0.46
SEMA3B-207ENST00000441915 C10orf126Q8N4M7 172 aa12.15□□□□□ -0.47
SEMA3B-207ENST00000441915 HTN1P15515 57 aa12.14□□□□□ -0.47
SEMA3B-207ENST00000441915 SHISA2Q6UWI4 295 aa12.14□□□□□ -0.47
SEMA3B-207ENST00000441915 USP9YO00507 2555 aaPredicted RBP12.14□□□□□ -0.47
SEMA3B-207ENST00000441915 IGLV4-3A0A075B6K6 122 aa12.13□□□□□ -0.47
SEMA3B-207ENST00000441915 B5MCH6 92 aa12.13□□□□□ -0.47
SEMA3B-207ENST00000441915 RHODO00212 210 aa12.13□□□□□ -0.47
SEMA3B-207ENST00000441915 ZNF22P17026 224 aaPredicted RBP12.13□□□□□ -0.47
SEMA3B-207ENST00000441915 PRO1854Q9UHT4 67 aa12.13□□□□□ -0.47
SEMA3B-207ENST00000441915 TRBV20-1A0A075B6N2 111 aa12.13□□□□□ -0.47
SEMA3B-207ENST00000441915 MAPK1IP1LQ8NDC0 245 aa12.12□□□□□ -0.47
SEMA3B-207ENST00000441915 A0A0J9YXV3 536 aa12.12□□□□□ -0.47
SEMA3B-207ENST00000441915 RBMY1A1P0DJD3 496 aaKnown RBP12.12□□□□□ -0.47
SEMA3B-207ENST00000441915 RBMY1CP0DJD4 496 aa12.12□□□□□ -0.47
SEMA3B-207ENST00000441915 RBMY1FQ15415 496 aaKnown RBP12.12□□□□□ -0.47
SEMA3B-207ENST00000441915 ZFAND6Q6FIF0 208 aa12.12□□□□□ -0.47
SEMA3B-207ENST00000441915 PPDPFLQ8WWR9 84 aa12.12□□□□□ -0.47
SEMA3B-207ENST00000441915 IGHV3-64A0A075B6Q5 118 aa12.11□□□□□ -0.47
SEMA3B-207ENST00000441915 ZNF702PQ9H963 129 aa12.11□□□□□ -0.47
SEMA3B-207ENST00000441915 A0A096LNT2 108 aa12.11□□□□□ -0.47
SEMA3B-207ENST00000441915 KNCNA6PVL3 124 aa12.11□□□□□ -0.47
SEMA3B-207ENST00000441915 CARD19Q96LW7 228 aa12.11□□□□□ -0.47
SEMA3B-207ENST00000441915 EDA2RQ9HAV5 297 aa12.11□□□□□ -0.47
SEMA3B-207ENST00000441915 IGHV3-73A0A0B4J1V6 119 aa12.1□□□□□ -0.47
SEMA3B-207ENST00000441915 TCL1BO95988 128 aa12.1□□□□□ -0.47
SEMA3B-207ENST00000441915 DEFB131AP59861 70 aa12.1□□□□□ -0.47
SEMA3B-207ENST00000441915 TEX29Q8N6K0 151 aa12.1□□□□□ -0.47
SEMA3B-207ENST00000441915 SCGB1C2P0DMR2 95 aa12.1□□□□□ -0.47
SEMA3B-207ENST00000441915 Q6YL49 198 aa12.1□□□□□ -0.47
SEMA3B-207ENST00000441915 FAM110AQ9BQ89 295 aa12.1□□□□□ -0.47
SEMA3B-207ENST00000441915 PYGO1Q9Y3Y4 419 aa12.1□□□□□ -0.47
SEMA3B-207ENST00000441915 A4D1N5 150 aa12.1□□□□□ -0.47
SEMA3B-207ENST00000441915 ANKRD17O75179 2603 aaKnown RBP12.09□□□□□ -0.47
SEMA3B-207ENST00000441915 ZANQ9Y493 2812 aa12.09□□□□□ -0.47
SEMA3B-207ENST00000441915 TRAV2A0A0B4J234 112 aa12.09□□□□□ -0.47
SEMA3B-207ENST00000441915 UTP20O75691 2785 aaKnown RBP12.09□□□□□ -0.47
SEMA3B-207ENST00000441915 CD28P10747 220 aa12.09□□□□□ -0.47
SEMA3B-207ENST00000441915 HERV-K104P63124 156 aa12.09□□□□□ -0.47
SEMA3B-207ENST00000441915 PTH2Q96A98 100 aa12.09□□□□□ -0.47
SEMA3B-207ENST00000441915 TNFRSF18Q9Y5U5 241 aa12.09□□□□□ -0.47
SEMA3B-207ENST00000441915 TEN1Q86WV5 123 aa12.09□□□□□ -0.47
SEMA3B-207ENST00000441915 MYO18BQ8IUG5 2567 aa12.08□□□□□ -0.48
SEMA3B-207ENST00000441915 A8MWV9 139 aa12.08□□□□□ -0.48
SEMA3B-207ENST00000441915 SLURP1P55000 103 aa12.08□□□□□ -0.48
SEMA3B-207ENST00000441915 PROK1P58294 105 aa12.08□□□□□ -0.48
SEMA3B-207ENST00000441915 DEFB136Q30KP8 78 aa12.08□□□□□ -0.48
SEMA3B-207ENST00000441915 DUX3Q96PT4 197 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms