RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 TRBV7-3A0A075B6L6 115 aa8.87□□□□□ -0.99
SCLT1-202ENST00000439369 TRAV26-2A0A0B4J265 109 aa8.87□□□□□ -0.99
SCLT1-202ENST00000439369 D6R8Y8 96 aa8.87□□□□□ -0.99
SCLT1-202ENST00000439369 RPS10P46783 165 aaKnown RBP8.87□□□□□ -0.99
SCLT1-202ENST00000439369 RPL32P62910 135 aaKnown RBP8.87□□□□□ -0.99
SCLT1-202ENST00000439369 FABP9Q0Z7S8 132 aa8.87□□□□□ -0.99
SCLT1-202ENST00000439369 MRPL23Q16540 153 aaKnown RBP8.87□□□□□ -0.99
SCLT1-202ENST00000439369 NRACQ8N912 160 aa8.87□□□□□ -0.99
SCLT1-202ENST00000439369 MUC7Q8TAX7 377 aa8.87□□□□□ -0.99
SCLT1-202ENST00000439369 PRELID3AQ96N28 172 aa8.87□□□□□ -0.99
SCLT1-202ENST00000439369 C20orf78Q9BR46 151 aa8.87□□□□□ -0.99
SCLT1-202ENST00000439369 ICOSQ9Y6W8 199 aa8.87□□□□□ -0.99
SCLT1-202ENST00000439369 HUWE1Q7Z6Z7 4374 aaKnown RBP8.87□□□□□ -0.99
SCLT1-202ENST00000439369 LINC00694P0DN24 101 aa8.86□□□□□ -0.99
SCLT1-202ENST00000439369 GYPEP15421 78 aa8.86□□□□□ -0.99
SCLT1-202ENST00000439369 OR10J3Q5JRS4 329 aa8.86□□□□□ -0.99
SCLT1-202ENST00000439369 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.86□□□□□ -0.99
SCLT1-202ENST00000439369 NEXN-AS1Q8NBZ9 246 aa8.86□□□□□ -0.99
SCLT1-202ENST00000439369 TNFRSF18Q9Y5U5 241 aa8.86□□□□□ -0.99
SCLT1-202ENST00000439369 A0A0J9YY99 117 aa8.85□□□□□ -0.99
SCLT1-202ENST00000439369 PRSS47A8MTI9 375 aa8.85□□□□□ -0.99
SCLT1-202ENST00000439369 TNFRSF6BO95407 300 aa8.85□□□□□ -0.99
SCLT1-202ENST00000439369 NCR2O95944 276 aa8.85□□□□□ -0.99
SCLT1-202ENST00000439369 ALKBH7Q9BT30 221 aaPredicted RBP8.85□□□□□ -0.99
SCLT1-202ENST00000439369 ST20Q9HBF5 79 aa8.85□□□□□ -0.99
SCLT1-202ENST00000439369 SMKR1H3BMG3 65 aa8.84□□□□□ -0.99
SCLT1-202ENST00000439369 P0DMU3 169 aa8.84□□□□□ -0.99
SCLT1-202ENST00000439369 FAM231AP0DMU4 169 aa8.84□□□□□ -0.99
SCLT1-202ENST00000439369 FAM231CP0DMU5 169 aa8.84□□□□□ -0.99
SCLT1-202ENST00000439369 SRIP30626 198 aa8.84□□□□□ -0.99
SCLT1-202ENST00000439369 TIRAPP58753 221 aa8.84□□□□□ -0.99
SCLT1-202ENST00000439369 UBE2D3P61077 147 aa8.84□□□□□ -0.99
SCLT1-202ENST00000439369 SUMO2P61956 95 aaKnown RBP8.84□□□□□ -0.99
SCLT1-202ENST00000439369 UBE2D2P62837 147 aa8.84□□□□□ -0.99
SCLT1-202ENST00000439369 DAZ4Q86SG3 579 aaKnown RBP8.84□□□□□ -0.99
SCLT1-202ENST00000439369 RPL39LQ96EH5 51 aaKnown RBP8.84□□□□□ -0.99
SCLT1-202ENST00000439369 DAZ3Q9NR90 486 aaKnown RBP8.84□□□□□ -0.99
SCLT1-202ENST00000439369 A0A096LPF7 62 aa8.83□□□□□ -1
SCLT1-202ENST00000439369 GAGE12JA6NER3 117 aa8.83□□□□□ -1
SCLT1-202ENST00000439369 IGLL5B9A064 214 aa8.83□□□□□ -1
SCLT1-202ENST00000439369 C3orf84H3BNL1 204 aa8.83□□□□□ -1
SCLT1-202ENST00000439369 TCAPO15273 167 aa8.83□□□□□ -1
SCLT1-202ENST00000439369 GAS8-AS1O95177 125 aa8.83□□□□□ -1
SCLT1-202ENST00000439369 NPYP01303 97 aa8.83□□□□□ -1
SCLT1-202ENST00000439369 TRGC2P03986 189 aa8.83□□□□□ -1
SCLT1-202ENST00000439369 GAGE1Q13065 139 aa8.83□□□□□ -1
SCLT1-202ENST00000439369 GAGE4Q13068 117 aa8.83□□□□□ -1
SCLT1-202ENST00000439369 GAGE5Q13069 117 aa8.83□□□□□ -1
SCLT1-202ENST00000439369 KIAA1644Q3SXP7 199 aa8.83□□□□□ -1
SCLT1-202ENST00000439369 GAGE13Q4V321 117 aa8.83□□□□□ -1
SCLT1-202ENST00000439369 TMEM97Q5BJF2 176 aa8.83□□□□□ -1
SCLT1-202ENST00000439369 NEGR1Q7Z3B1 354 aa8.83□□□□□ -1
SCLT1-202ENST00000439369 ZNRF2Q8NHG8 242 aa8.83□□□□□ -1
SCLT1-202ENST00000439369 MAP1LC3AQ9H492 121 aa8.83□□□□□ -1
SCLT1-202ENST00000439369 TRBV27A0A0K0K1C4 114 aa8.82□□□□□ -1
SCLT1-202ENST00000439369 LOC100131303A0A0U1RQF7 123 aa8.82□□□□□ -1
SCLT1-202ENST00000439369 SDHAF1A6NFY7 115 aa8.82□□□□□ -1
SCLT1-202ENST00000439369 VCYO14598 125 aa8.82□□□□□ -1
SCLT1-202ENST00000439369 POLR2KP53803 58 aaKnown RBP8.82□□□□□ -1
SCLT1-202ENST00000439369 ATP6V0E2Q8NHE4 81 aa8.82□□□□□ -1
SCLT1-202ENST00000439369 TMEM70Q9BUB7 260 aa8.82□□□□□ -1
SCLT1-202ENST00000439369 Q9UF83 564 aa8.82□□□□□ -1
SCLT1-202ENST00000439369 K7EMI3 77 aa8.81□□□□□ -1
SCLT1-202ENST00000439369 PMCHP20382 165 aa8.81□□□□□ -1
SCLT1-202ENST00000439369 SMIM2Q9BVW6 85 aa8.81□□□□□ -1
SCLT1-202ENST00000439369 NXT2Q9NPJ8 142 aaKnown RBP8.81□□□□□ -1
SCLT1-202ENST00000439369 I3L3M4 83 aa8.8□□□□□ -1
SCLT1-202ENST00000439369 NUDT3O95989 172 aa8.8□□□□□ -1
SCLT1-202ENST00000439369 KIR2DL4Q99706 377 aa8.8□□□□□ -1
SCLT1-202ENST00000439369 GTSF1LQ9H1H1 148 aa8.8□□□□□ -1
SCLT1-202ENST00000439369 APLNQ9ULZ1 77 aa8.8□□□□□ -1
SCLT1-202ENST00000439369 COTL1Q14019 142 aa8.79□□□□□ -1
SCLT1-202ENST00000439369 Q8N8P6 123 aa8.79□□□□□ -1
SCLT1-202ENST00000439369 IGLV2-18A0A075B6J9 118 aa8.78□□□□□ -1
SCLT1-202ENST00000439369 C1orf196B1AJZ1 125 aa8.78□□□□□ -1
SCLT1-202ENST00000439369 RAB5BP61020 215 aa8.78□□□□□ -1
SCLT1-202ENST00000439369 Q0VG73 95 aa8.78□□□□□ -1
SCLT1-202ENST00000439369 C18orf32Q8TCD1 76 aa8.78□□□□□ -1
SCLT1-202ENST00000439369 TRBV6-8A0A0A6YYG3 113 aa8.77□□□□□ -1.01
SCLT1-202ENST00000439369 LINC01546A6NGU7 62 aa8.77□□□□□ -1.01
SCLT1-202ENST00000439369 ZFAND6Q6FIF0 208 aa8.77□□□□□ -1.01
SCLT1-202ENST00000439369 LYPD5Q6UWN5 251 aa8.77□□□□□ -1.01
SCLT1-202ENST00000439369 PRSS3P2Q8NHM4 247 aa8.77□□□□□ -1.01
SCLT1-202ENST00000439369 TSHBP01222 138 aa8.76□□□□□ -1.01
SCLT1-202ENST00000439369 FCER1GP30273 86 aa8.76□□□□□ -1.01
SCLT1-202ENST00000439369 CCL18P55774 89 aa8.76□□□□□ -1.01
SCLT1-202ENST00000439369 IQCJQ1A5X6 159 aa8.76□□□□□ -1.01
SCLT1-202ENST00000439369 LELP1Q5T871 98 aa8.76□□□□□ -1.01
SCLT1-202ENST00000439369 TRBV25-1A0A075B6N4 114 aa8.75□□□□□ -1.01
SCLT1-202ENST00000439369 IGHV1-24A0A0C4DH33 117 aa8.75□□□□□ -1.01
SCLT1-202ENST00000439369 IGHV3-38A0A0C4DH36 116 aa8.75□□□□□ -1.01
SCLT1-202ENST00000439369 LOC389332A0A1B0GUA5 103 aa8.75□□□□□ -1.01
SCLT1-202ENST00000439369 HIST1H2BKO60814 126 aa8.75□□□□□ -1.01
SCLT1-202ENST00000439369 HIST1H2BJP06899 126 aa8.75□□□□□ -1.01
SCLT1-202ENST00000439369 HIST1H2BOP23527 126 aa8.75□□□□□ -1.01
SCLT1-202ENST00000439369 G0S2P27469 103 aa8.75□□□□□ -1.01
SCLT1-202ENST00000439369 HIST1H2BBP33778 126 aa8.75□□□□□ -1.01
SCLT1-202ENST00000439369 IFI27P40305 119 aaPredicted RBP8.75□□□□□ -1.01
SCLT1-202ENST00000439369 HIST1H2BDP58876 126 aa8.75□□□□□ -1.01
SCLT1-202ENST00000439369 PKIAP61925 76 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms