RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 NIPBLQ6KC79 2804 aaeCLIP12.12□□□□□ -0.47
GSE1-206ENST00000438180 ATOH7Q8N100 152 aa12.12□□□□□ -0.47
GSE1-206ENST00000438180 TOMM6Q96B49 74 aa12.12□□□□□ -0.47
GSE1-206ENST00000438180 C18orf15Q96N68 181 aa12.12□□□□□ -0.47
GSE1-206ENST00000438180 ATRQ13535 2644 aa12.12□□□□□ -0.47
GSE1-206ENST00000438180 TRGV1A0A0A0MS02 117 aa12.11□□□□□ -0.47
GSE1-206ENST00000438180 LINC00587B1AMM8 73 aa12.11□□□□□ -0.47
GSE1-206ENST00000438180 IGLL1P15814 213 aa12.11□□□□□ -0.47
GSE1-206ENST00000438180 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.11□□□□□ -0.47
GSE1-206ENST00000438180 KIR2DL5BQ8NHK3 375 aa12.11□□□□□ -0.47
GSE1-206ENST00000438180 CIDEAO60543 219 aa12.1□□□□□ -0.47
GSE1-206ENST00000438180 PRSS1P07477 247 aa12.1□□□□□ -0.47
GSE1-206ENST00000438180 APOC4P55056 127 aa12.1□□□□□ -0.47
GSE1-206ENST00000438180 RHOHQ15669 191 aa12.1□□□□□ -0.47
GSE1-206ENST00000438180 C12orf54Q6X4T0 127 aa12.1□□□□□ -0.47
GSE1-206ENST00000438180 OR4C5Q8NGB2 326 aa12.1□□□□□ -0.47
GSE1-206ENST00000438180 CYSLTR1Q9Y271 337 aa12.1□□□□□ -0.47
GSE1-206ENST00000438180 IGHV3-73A0A0B4J1V6 119 aa12.09□□□□□ -0.47
GSE1-206ENST00000438180 TRAV4A0A0B4J268 109 aa12.09□□□□□ -0.47
GSE1-206ENST00000438180 I3L3M4 83 aa12.09□□□□□ -0.47
GSE1-206ENST00000438180 IGHV3-53P01767 116 aa12.09□□□□□ -0.47
GSE1-206ENST00000438180 C2orf66Q6UXQ4 117 aa12.09□□□□□ -0.47
GSE1-206ENST00000438180 DNAJC30Q96LL9 226 aa12.09□□□□□ -0.47
GSE1-206ENST00000438180 TNFRSF18Q9Y5U5 241 aa12.09□□□□□ -0.47
GSE1-206ENST00000438180 CYSRT1A8MQ03 144 aa12.08□□□□□ -0.47
GSE1-206ENST00000438180 Q6ZN92 141 aa12.08□□□□□ -0.47
GSE1-206ENST00000438180 SCGB3A1Q96QR1 104 aa12.08□□□□□ -0.47
GSE1-206ENST00000438180 MIEN1Q9BRT3 115 aa12.08□□□□□ -0.47
GSE1-206ENST00000438180 TENM1Q9UKZ4 2725 aa12.08□□□□□ -0.48
GSE1-206ENST00000438180 SMIM9A6NGZ8 99 aa12.08□□□□□ -0.48
GSE1-206ENST00000438180 DEFA6Q01524 100 aa12.08□□□□□ -0.48
GSE1-206ENST00000438180 OVOL2Q9BRP0 275 aa12.08□□□□□ -0.48
GSE1-206ENST00000438180 NOP10Q9NPE3 64 aaKnown RBP12.08□□□□□ -0.48
GSE1-206ENST00000438180 NACAE9PAV3 2078 aa12.08□□□□□ -0.48
GSE1-206ENST00000438180 RIPPLY3P57055 190 aa12.07□□□□□ -0.48
GSE1-206ENST00000438180 NEGR1Q7Z3B1 354 aa12.07□□□□□ -0.48
GSE1-206ENST00000438180 ERASQ7Z444 233 aa12.07□□□□□ -0.48
GSE1-206ENST00000438180 ZMAT5Q9UDW3 170 aaKnown RBP12.07□□□□□ -0.48
GSE1-206ENST00000438180 Q6ZTI0 123 aa12.06□□□□□ -0.48
GSE1-206ENST00000438180 UQCR10Q9UDW1 63 aa12.06□□□□□ -0.48
GSE1-206ENST00000438180 PLAC8L1A1L4L8 177 aa12.06□□□□□ -0.48
GSE1-206ENST00000438180 PMCHL2Q9BQD1 86 aa12.06□□□□□ -0.48
GSE1-206ENST00000438180 TRAV12-1A0A0B4J245 112 aa12.05□□□□□ -0.48
GSE1-206ENST00000438180 PRIMA1Q86XR5 153 aa12.05□□□□□ -0.48
GSE1-206ENST00000438180 TRGV2A0A075B6R0 118 aa12.04□□□□□ -0.48
GSE1-206ENST00000438180 IGLC3P0DOY3 106 aa12.04□□□□□ -0.48
GSE1-206ENST00000438180 ODF1Q14990 250 aa12.04□□□□□ -0.48
GSE1-206ENST00000438180 MAJINQ3KP22 176 aa12.04□□□□□ -0.48
GSE1-206ENST00000438180 TMEM141Q96I45 108 aa12.04□□□□□ -0.48
GSE1-206ENST00000438180 TP53TG1Q9Y2A0 90 aa12.04□□□□□ -0.48
GSE1-206ENST00000438180 NOTCH3Q9UM47 2321 aa12.04□□□□□ -0.48
GSE1-206ENST00000438180 TRBV10-1A0A0K0K1A3 114 aa12.03□□□□□ -0.48
GSE1-206ENST00000438180 TSHBP01222 138 aa12.03□□□□□ -0.48
GSE1-206ENST00000438180 NEXN-AS1Q8NBZ9 246 aa12.03□□□□□ -0.48
GSE1-206ENST00000438180 A0A087WX48 190 aa12.03□□□□□ -0.48
GSE1-206ENST00000438180 hDV102S1A0JD36 115 aa12.03□□□□□ -0.48
GSE1-206ENST00000438180 Q6ZSN1 163 aa12.03□□□□□ -0.48
GSE1-206ENST00000438180 TIMM17AQ99595 171 aa12.03□□□□□ -0.48
GSE1-206ENST00000438180 ZMAT4Q9H898 229 aa12.03□□□□□ -0.48
GSE1-206ENST00000438180 VWFP04275 2813 aa12.02□□□□□ -0.48
GSE1-206ENST00000438180 DPM2O94777 84 aa12.02□□□□□ -0.49
GSE1-206ENST00000438180 P0DMU3 169 aa12.02□□□□□ -0.49
GSE1-206ENST00000438180 FAM231AP0DMU4 169 aa12.02□□□□□ -0.49
GSE1-206ENST00000438180 FAM231CP0DMU5 169 aa12.02□□□□□ -0.49
GSE1-206ENST00000438180 ZNF479Q96JC4 524 aa12.02□□□□□ -0.49
GSE1-206ENST00000438180 GAGE12BA1L429 117 aa12.01□□□□□ -0.49
GSE1-206ENST00000438180 K7EQD1 137 aa12.01□□□□□ -0.49
GSE1-206ENST00000438180 GAGE7O76087 117 aa12.01□□□□□ -0.49
GSE1-206ENST00000438180 IGKCP01834 107 aa12.01□□□□□ -0.49
GSE1-206ENST00000438180 GAGE12FP0CL80 117 aa12.01□□□□□ -0.49
GSE1-206ENST00000438180 GAGE12GP0CL81 117 aa12.01□□□□□ -0.49
GSE1-206ENST00000438180 GAGE12IP0CL82 117 aa12.01□□□□□ -0.49
GSE1-206ENST00000438180 PLNP26678 52 aa12.01□□□□□ -0.49
GSE1-206ENST00000438180 DKK2Q9UBU2 259 aa12.01□□□□□ -0.49
GSE1-206ENST00000438180 RPL36AP83881 106 aaKnown RBP12□□□□□ -0.49
GSE1-206ENST00000438180 RPL36ALQ969Q0 106 aaKnown RBP12□□□□□ -0.49
GSE1-206ENST00000438180 MRPL52Q86TS9 123 aaKnown RBP12□□□□□ -0.49
GSE1-206ENST00000438180 C20orf203Q8NBC4 194 aa12□□□□□ -0.49
GSE1-206ENST00000438180 X6R8D5 127 aa12□□□□□ -0.49
GSE1-206ENST00000438180 TRBV7-3A0A075B6L6 115 aa11.99□□□□□ -0.49
GSE1-206ENST00000438180 IGIPA6NJ69 53 aa11.99□□□□□ -0.49
GSE1-206ENST00000438180 F8VRH5 84 aa11.99□□□□□ -0.49
GSE1-206ENST00000438180 COTL1Q14019 142 aa11.99□□□□□ -0.49
GSE1-206ENST00000438180 BAALCQ8WXS3 180 aa11.99□□□□□ -0.49
GSE1-206ENST00000438180 C14orf144Q96I85 54 aa11.99□□□□□ -0.49
GSE1-206ENST00000438180 IGHV4-30-4P0DP06 118 aa11.98□□□□□ -0.49
GSE1-206ENST00000438180 PAPPA-AS1Q5QFB9 102 aa11.98□□□□□ -0.49
GSE1-206ENST00000438180 CHTOPQ9Y3Y2 248 aaKnown RBP11.98□□□□□ -0.49
GSE1-206ENST00000438180 HNRNPA3P51991 378 aaKnown RBP11.97□□□□□ -0.49
GSE1-206ENST00000438180 EMP1P54849 157 aa11.97□□□□□ -0.49
GSE1-206ENST00000438180 RPL39P62891 51 aaKnown RBP11.97□□□□□ -0.49
GSE1-206ENST00000438180 EGFEM1PQ0D2K5 195 aa11.97□□□□□ -0.49
GSE1-206ENST00000438180 MRPL35Q9NZE8 188 aaKnown RBP11.97□□□□□ -0.49
GSE1-206ENST00000438180 TRGV4A0A0C4DH28 118 aa11.97□□□□□ -0.49
GSE1-206ENST00000438180 TRBV6-4A0A1B0GX49 114 aa11.97□□□□□ -0.49
GSE1-206ENST00000438180 NPSP0C0P6 89 aa11.97□□□□□ -0.49
GSE1-206ENST00000438180 PMVKQ15126 192 aa11.97□□□□□ -0.49
GSE1-206ENST00000438180 DEFB135Q30KP9 77 aa11.97□□□□□ -0.49
GSE1-206ENST00000438180 SLC25A34Q6PIV7 304 aa11.97□□□□□ -0.49
GSE1-206ENST00000438180 DAZ4Q86SG3 579 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms