RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 ZNF815PA8K554 130 aa7.79□□□□□ -1.16
CLSTN1-203ENST00000435891 RHODO00212 210 aa7.79□□□□□ -1.16
CLSTN1-203ENST00000435891 DPH3P1Q9H4G8 78 aa7.79□□□□□ -1.16
CLSTN1-203ENST00000435891 ZNF462Q96JM2 2506 aa7.79□□□□□ -1.16
CLSTN1-203ENST00000435891 MYMXA0A1B0GTQ4 84 aa7.79□□□□□ -1.16
CLSTN1-203ENST00000435891 H3BUA1 57 aa7.79□□□□□ -1.16
CLSTN1-203ENST00000435891 APRG1Q8IVJ8 170 aa7.79□□□□□ -1.16
CLSTN1-203ENST00000435891 DCANP1Q8TF63 244 aa7.79□□□□□ -1.16
CLSTN1-203ENST00000435891 ZNF469Q96JG9 3925 aaPredicted RBP7.79□□□□□ -1.16
CLSTN1-203ENST00000435891 NTN5Q8WTR8 489 aaPredicted RBP7.78□□□□□ -1.16
CLSTN1-203ENST00000435891 TEX15Q9BXT5 2789 aa7.78□□□□□ -1.16
CLSTN1-203ENST00000435891 LINC00315P59091 139 aa7.78□□□□□ -1.16
CLSTN1-203ENST00000435891 TRAV8-4A0A0B4J246 113 aa7.78□□□□□ -1.16
CLSTN1-203ENST00000435891 TCL1BO95988 128 aa7.78□□□□□ -1.16
CLSTN1-203ENST00000435891 IGKV3-20P01619 116 aa7.78□□□□□ -1.16
CLSTN1-203ENST00000435891 TAL2Q16559 108 aa7.78□□□□□ -1.16
CLSTN1-203ENST00000435891 DEFB112Q30KQ8 113 aa7.78□□□□□ -1.16
CLSTN1-203ENST00000435891 PSMG4Q5JS54 123 aa7.78□□□□□ -1.16
CLSTN1-203ENST00000435891 MORN3Q6PF18 240 aaPredicted RBP7.78□□□□□ -1.16
CLSTN1-203ENST00000435891 C10orf126Q8N4M7 172 aa7.78□□□□□ -1.16
CLSTN1-203ENST00000435891 SCGB3A1Q96QR1 104 aa7.78□□□□□ -1.16
CLSTN1-203ENST00000435891 CHCHD5Q9BSY4 110 aa7.78□□□□□ -1.16
CLSTN1-203ENST00000435891 TRAV12-3A0A0B4J271 114 aa7.77□□□□□ -1.17
CLSTN1-203ENST00000435891 SLC25A20O43772 301 aa7.77□□□□□ -1.17
CLSTN1-203ENST00000435891 TOMM6Q96B49 74 aa7.77□□□□□ -1.17
CLSTN1-203ENST00000435891 MYO9AB2RTY4 2548 aa7.77□□□□□ -1.17
CLSTN1-203ENST00000435891 KLLNB2CW77 178 aa7.77□□□□□ -1.17
CLSTN1-203ENST00000435891 PSMB8P28062 276 aa7.77□□□□□ -1.17
CLSTN1-203ENST00000435891 KIF25-AS1Q9Y6Z4 181 aa7.77□□□□□ -1.17
CLSTN1-203ENST00000435891 TLN2Q9Y4G6 2542 aa7.77□□□□□ -1.17
CLSTN1-203ENST00000435891 TRAV12-2A0A075B6T6 113 aa7.77□□□□□ -1.17
CLSTN1-203ENST00000435891 A0A087WWL8 130 aa7.77□□□□□ -1.17
CLSTN1-203ENST00000435891 C2orf66Q6UXQ4 117 aa7.77□□□□□ -1.17
CLSTN1-203ENST00000435891 B4DSR2 109 aa7.76□□□□□ -1.17
CLSTN1-203ENST00000435891 F8VRH5 84 aa7.76□□□□□ -1.17
CLSTN1-203ENST00000435891 NEXN-AS1Q8NBZ9 246 aa7.76□□□□□ -1.17
CLSTN1-203ENST00000435891 TRAV2A0A0B4J234 112 aa7.76□□□□□ -1.17
CLSTN1-203ENST00000435891 LOC107984640A0A0U1RRK4 108 aa7.76□□□□□ -1.17
CLSTN1-203ENST00000435891 ZNF56Q15929 161 aa7.76□□□□□ -1.17
CLSTN1-203ENST00000435891 ORMDL2Q53FV1 153 aa7.76□□□□□ -1.17
CLSTN1-203ENST00000435891 BAALCQ8WXS3 180 aa7.76□□□□□ -1.17
CLSTN1-203ENST00000435891 DUX5Q96PT3 197 aa7.76□□□□□ -1.17
CLSTN1-203ENST00000435891 H7C1H1 209 aa7.75□□□□□ -1.17
CLSTN1-203ENST00000435891 DUSP14O95147 198 aaKnown RBP7.75□□□□□ -1.17
CLSTN1-203ENST00000435891 USP24Q9UPU5 2620 aa7.75□□□□□ -1.17
CLSTN1-203ENST00000435891 CD7P09564 240 aa7.75□□□□□ -1.17
CLSTN1-203ENST00000435891 PLNP26678 52 aa7.75□□□□□ -1.17
CLSTN1-203ENST00000435891 C9orf153Q5TBE3 101 aa7.75□□□□□ -1.17
CLSTN1-203ENST00000435891 TRPT1Q86TN4 253 aaKnown RBP7.75□□□□□ -1.17
CLSTN1-203ENST00000435891 TRAV12-1A0A0B4J245 112 aa7.74□□□□□ -1.17
CLSTN1-203ENST00000435891 NXPH4O95158 308 aa7.74□□□□□ -1.17
CLSTN1-203ENST00000435891 MED14OSP0DP75 135 aa7.74□□□□□ -1.17
CLSTN1-203ENST00000435891 SLC25A16P16260 332 aa7.74□□□□□ -1.17
CLSTN1-203ENST00000435891 KLHL30-AS1Q8NEE0 82 aa7.74□□□□□ -1.17
CLSTN1-203ENST00000435891 MDFICQ9P1T7 246 aa7.74□□□□□ -1.17
CLSTN1-203ENST00000435891 TSHBP01222 138 aa7.74□□□□□ -1.17
CLSTN1-203ENST00000435891 C5orf47Q569G3 176 aa7.74□□□□□ -1.17
CLSTN1-203ENST00000435891 NAV2Q8IVL1 2488 aa7.74□□□□□ -1.17
CLSTN1-203ENST00000435891 K7EMT4 169 aa7.74□□□□□ -1.17
CLSTN1-203ENST00000435891 CRYGDP07320 174 aa7.74□□□□□ -1.17
CLSTN1-203ENST00000435891 LINC00694P0DN24 101 aa7.74□□□□□ -1.17
CLSTN1-203ENST00000435891 RPL39P62891 51 aaKnown RBP7.74□□□□□ -1.17
CLSTN1-203ENST00000435891 SUMO4Q6EEV6 95 aa7.74□□□□□ -1.17
CLSTN1-203ENST00000435891 HERVK_113P61574 105 aa7.73□□□□□ -1.17
CLSTN1-203ENST00000435891 PRADC1Q9BSG0 188 aa7.73□□□□□ -1.17
CLSTN1-203ENST00000435891 TRBV7-3A0A075B6L6 115 aa7.73□□□□□ -1.17
CLSTN1-203ENST00000435891 SYNJ2BPP57105 145 aa7.73□□□□□ -1.17
CLSTN1-203ENST00000435891 FAM74A4Q5TZK3 123 aa7.73□□□□□ -1.17
CLSTN1-203ENST00000435891 POM121L12Q8N7R1 296 aa7.73□□□□□ -1.17
CLSTN1-203ENST00000435891 A0A096LNT2 108 aa7.72□□□□□ -1.17
CLSTN1-203ENST00000435891 PRB1P04280 392 aa7.72□□□□□ -1.17
CLSTN1-203ENST00000435891 CSDC2Q9Y534 153 aaKnown RBP7.72□□□□□ -1.17
CLSTN1-203ENST00000435891 NF1P21359 2839 aa7.72□□□□□ -1.17
CLSTN1-203ENST00000435891 F5H697 171 aa7.72□□□□□ -1.17
CLSTN1-203ENST00000435891 LGALS1P09382 135 aaKnown RBP7.72□□□□□ -1.17
CLSTN1-203ENST00000435891 SPINK13Q1W4C9 94 aa7.72□□□□□ -1.17
CLSTN1-203ENST00000435891 TP53TG1Q9Y2A0 90 aa7.72□□□□□ -1.17
CLSTN1-203ENST00000435891 TEX49A0A1B0GTD5 131 aa7.72□□□□□ -1.17
CLSTN1-203ENST00000435891 POLR2KP53803 58 aaKnown RBP7.72□□□□□ -1.17
CLSTN1-203ENST00000435891 NBPF19A0A087WUL8 3843 aa7.71□□□□□ -1.17
CLSTN1-203ENST00000435891 IGHV4OR15-8A0A075B7B6 117 aa7.71□□□□□ -1.17
CLSTN1-203ENST00000435891 A0A087WW49 117 aa7.71□□□□□ -1.17
CLSTN1-203ENST00000435891 Q8N1Y9 231 aa7.71□□□□□ -1.17
CLSTN1-203ENST00000435891 SPXQ9BT56 116 aa7.71□□□□□ -1.17
CLSTN1-203ENST00000435891 EPG5Q9HCE0 2579 aa7.71□□□□□ -1.17
CLSTN1-203ENST00000435891 A0A0J9YX75 114 aa7.71□□□□□ -1.18
CLSTN1-203ENST00000435891 HIST2H2BDQ6DRA6 164 aa7.71□□□□□ -1.18
CLSTN1-203ENST00000435891 PLEKHB2Q96CS7 222 aa7.71□□□□□ -1.18
CLSTN1-203ENST00000435891 ZNF580Q9UK33 172 aa7.71□□□□□ -1.18
CLSTN1-203ENST00000435891 SONP18583 2426 aaKnown RBP7.71□□□□□ -1.18
CLSTN1-203ENST00000435891 IGHV3-16A0A0C4DH30 117 aa7.71□□□□□ -1.18
CLSTN1-203ENST00000435891 SDHAF1A6NFY7 115 aa7.7□□□□□ -1.18
CLSTN1-203ENST00000435891 C11orf86A6NJI1 115 aa7.7□□□□□ -1.18
CLSTN1-203ENST00000435891 C18orf65Q6ZTR6 163 aa7.7□□□□□ -1.18
CLSTN1-203ENST00000435891 LINC01356Q8N9X3 169 aa7.7□□□□□ -1.18
CLSTN1-203ENST00000435891 EDA2RQ9HAV5 297 aa7.7□□□□□ -1.18
CLSTN1-203ENST00000435891 IGLV4-69A0A075B6H9 119 aa7.7□□□□□ -1.18
CLSTN1-203ENST00000435891 IGIPA6NJ69 53 aa7.7□□□□□ -1.18
CLSTN1-203ENST00000435891 K7EQG2 157 aa7.7□□□□□ -1.18
CLSTN1-203ENST00000435891 TMEM126AQ9H061 195 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 175.1 ms