RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 TRPT1Q86TN4 253 aaKnown RBP9.02□□□□□ -0.97
CLDN4-203ENST00000435050 NHP2Q9NX24 153 aaKnown RBP9.02□□□□□ -0.97
CLDN4-203ENST00000435050 HLA-DRB4X5D2U9 266 aa9.02□□□□□ -0.97
CLDN4-203ENST00000435050 CRXO43186 299 aaPredicted RBP9.02□□□□□ -0.97
CLDN4-203ENST00000435050 PRSS29PA6NIE9 313 aa9.02□□□□□ -0.97
CLDN4-203ENST00000435050 H3BUT2 72 aa9.02□□□□□ -0.97
CLDN4-203ENST00000435050 SFTA2Q6UW10 78 aa9.02□□□□□ -0.97
CLDN4-203ENST00000435050 FBN2P35556 2912 aa9.01□□□□□ -0.97
CLDN4-203ENST00000435050 CSMD2Q7Z408 3487 aa9.01□□□□□ -0.97
CLDN4-203ENST00000435050 A6NJY4 79 aa9.01□□□□□ -0.97
CLDN4-203ENST00000435050 INAFM1C9JVW0 142 aa9.01□□□□□ -0.97
CLDN4-203ENST00000435050 TMEM86BQ8N661 226 aa9.01□□□□□ -0.97
CLDN4-203ENST00000435050 ORAOV1Q8WV07 137 aa9.01□□□□□ -0.97
CLDN4-203ENST00000435050 OPRPNQ99935 248 aaPredicted RBP9.01□□□□□ -0.97
CLDN4-203ENST00000435050 CST9LQ9H4G1 147 aa9.01□□□□□ -0.97
CLDN4-203ENST00000435050 ZNF815PA8K554 130 aa9.01□□□□□ -0.97
CLDN4-203ENST00000435050 FSHBP01225 129 aa9.01□□□□□ -0.97
CLDN4-203ENST00000435050 TRBV7-9A0A0J9YWB2 115 aa9□□□□□ -0.97
CLDN4-203ENST00000435050 F8VRH5 84 aa9□□□□□ -0.97
CLDN4-203ENST00000435050 CCL25O15444 150 aa9□□□□□ -0.97
CLDN4-203ENST00000435050 BVES-AS1Q5T3Y7 98 aa9□□□□□ -0.97
CLDN4-203ENST00000435050 A0A087WX48 190 aa9□□□□□ -0.97
CLDN4-203ENST00000435050 GAGE10A6NGK3 116 aa9□□□□□ -0.97
CLDN4-203ENST00000435050 PLNP26678 52 aa9□□□□□ -0.97
CLDN4-203ENST00000435050 ZFP2Q6ZN57 461 aa9□□□□□ -0.97
CLDN4-203ENST00000435050 LGALS3P17931 250 aaKnown RBP9□□□□□ -0.97
CLDN4-203ENST00000435050 GAGE12BA1L429 117 aa8.99□□□□□ -0.97
CLDN4-203ENST00000435050 M0R2P5 195 aa8.99□□□□□ -0.97
CLDN4-203ENST00000435050 GAGE7O76087 117 aa8.99□□□□□ -0.97
CLDN4-203ENST00000435050 GAGE12FP0CL80 117 aa8.99□□□□□ -0.97
CLDN4-203ENST00000435050 GAGE12GP0CL81 117 aa8.99□□□□□ -0.97
CLDN4-203ENST00000435050 GAGE12IP0CL82 117 aa8.99□□□□□ -0.97
CLDN4-203ENST00000435050 AMMECR1LQ6DCA0 310 aa8.99□□□□□ -0.97
CLDN4-203ENST00000435050 ZNF580Q9UK33 172 aa8.99□□□□□ -0.97
CLDN4-203ENST00000435050 NF1P21359 2839 aa8.99□□□□□ -0.97
CLDN4-203ENST00000435050 MED14OSP0DP75 135 aa8.99□□□□□ -0.97
CLDN4-203ENST00000435050 AZU1P20160 251 aa8.99□□□□□ -0.97
CLDN4-203ENST00000435050 LY6G6DO95868 133 aa8.99□□□□□ -0.97
CLDN4-203ENST00000435050 DEFB130BP0DP73 79 aa8.99□□□□□ -0.97
CLDN4-203ENST00000435050 DEFB130AP0DP74 79 aa8.99□□□□□ -0.97
CLDN4-203ENST00000435050 HSD52Q0P140 79 aa8.99□□□□□ -0.97
CLDN4-203ENST00000435050 CHAC1Q9BUX1 264 aa8.99□□□□□ -0.97
CLDN4-203ENST00000435050 TRAV26-1A0A087WT03 109 aa8.98□□□□□ -0.97
CLDN4-203ENST00000435050 IGKV2D-26A0A0A0MRZ7 120 aa8.98□□□□□ -0.97
CLDN4-203ENST00000435050 NOP10Q9NPE3 64 aaKnown RBP8.98□□□□□ -0.97
CLDN4-203ENST00000435050 KRTAP1-3Q8IUG1 177 aa8.98□□□□□ -0.97
CLDN4-203ENST00000435050 ZNRF2Q8NHG8 242 aa8.98□□□□□ -0.97
CLDN4-203ENST00000435050 F8P00451 2351 aa8.98□□□□□ -0.97
CLDN4-203ENST00000435050 IGHV4-4A0A075B6R2 117 aa8.98□□□□□ -0.97
CLDN4-203ENST00000435050 H7C2G1 150 aa8.98□□□□□ -0.97
CLDN4-203ENST00000435050 PRSS2P07478 247 aa8.98□□□□□ -0.97
CLDN4-203ENST00000435050 TRGV4A0A0C4DH28 118 aa8.98□□□□□ -0.97
CLDN4-203ENST00000435050 GAGE12JA6NER3 117 aa8.98□□□□□ -0.97
CLDN4-203ENST00000435050 A8MWV9 139 aa8.98□□□□□ -0.97
CLDN4-203ENST00000435050 I3L3M4 83 aa8.98□□□□□ -0.97
CLDN4-203ENST00000435050 CRYBA4P53673 196 aa8.98□□□□□ -0.97
CLDN4-203ENST00000435050 GAGE4Q13068 117 aa8.98□□□□□ -0.97
CLDN4-203ENST00000435050 GAGE5Q13069 117 aa8.98□□□□□ -0.97
CLDN4-203ENST00000435050 GAGE13Q4V321 117 aa8.98□□□□□ -0.97
CLDN4-203ENST00000435050 GEMIN7Q9H840 131 aaKnown RBP8.98□□□□□ -0.97
CLDN4-203ENST00000435050 CR1P17927 2039 aa8.97□□□□□ -0.97
CLDN4-203ENST00000435050 APOMO95445 188 aa8.97□□□□□ -0.97
CLDN4-203ENST00000435050 HERV-K104P63124 156 aa8.97□□□□□ -0.97
CLDN4-203ENST00000435050 SIGMAR1Q99720 223 aa8.97□□□□□ -0.97
CLDN4-203ENST00000435050 PRADC1Q9BSG0 188 aa8.97□□□□□ -0.97
CLDN4-203ENST00000435050 COX11Q9Y6N1 276 aa8.97□□□□□ -0.97
CLDN4-203ENST00000435050 GCN1Q92616 2671 aaKnown RBP8.97□□□□□ -0.97
CLDN4-203ENST00000435050 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.97□□□□□ -0.97
CLDN4-203ENST00000435050 IGKV2-29A2NJV5 120 aaPredicted RBP8.97□□□□□ -0.97
CLDN4-203ENST00000435050 CEMP1Q6PRD7 247 aaPredicted RBP8.97□□□□□ -0.97
CLDN4-203ENST00000435050 BAALCQ8WXS3 180 aa8.97□□□□□ -0.97
CLDN4-203ENST00000435050 SS18L2Q9UHA2 77 aa8.97□□□□□ -0.97
CLDN4-203ENST00000435050 MXRA5Q9NR99 2828 aa8.96□□□□□ -0.97
CLDN4-203ENST00000435050 SMIM13P0DJ93 91 aa8.96□□□□□ -0.97
CLDN4-203ENST00000435050 PMVKQ15126 192 aa8.96□□□□□ -0.97
CLDN4-203ENST00000435050 SPXQ9BT56 116 aa8.96□□□□□ -0.97
CLDN4-203ENST00000435050 MRPL52Q86TS9 123 aaKnown RBP8.96□□□□□ -0.98
CLDN4-203ENST00000435050 ZNF575Q86XF7 245 aa8.96□□□□□ -0.98
CLDN4-203ENST00000435050 K7EP13 123 aa8.96□□□□□ -0.98
CLDN4-203ENST00000435050 UBE2L6O14933 153 aa8.96□□□□□ -0.98
CLDN4-203ENST00000435050 TOMM6Q96B49 74 aa8.96□□□□□ -0.98
CLDN4-203ENST00000435050 Q1RN00 199 aa8.95□□□□□ -0.98
CLDN4-203ENST00000435050 ODF3L2Q3SX64 289 aa8.95□□□□□ -0.98
CLDN4-203ENST00000435050 ODF3Q96PU9 254 aa8.95□□□□□ -0.98
CLDN4-203ENST00000435050 K7ERJ3 54 aa8.95□□□□□ -0.98
CLDN4-203ENST00000435050 RBMY1A1P0DJD3 496 aaKnown RBP8.95□□□□□ -0.98
CLDN4-203ENST00000435050 RBMY1CP0DJD4 496 aa8.95□□□□□ -0.98
CLDN4-203ENST00000435050 HTN3P15516 51 aa8.95□□□□□ -0.98
CLDN4-203ENST00000435050 RBMY1FQ15415 496 aaKnown RBP8.95□□□□□ -0.98
CLDN4-203ENST00000435050 RBMY1BA6NDE4 496 aaKnown RBP8.95□□□□□ -0.98
CLDN4-203ENST00000435050 RBMY1EA6NEQ0 496 aaKnown RBP8.95□□□□□ -0.98
CLDN4-203ENST00000435050 CRYGDP07320 174 aa8.95□□□□□ -0.98
CLDN4-203ENST00000435050 RBMY1DP0C7P1 496 aaKnown RBP8.95□□□□□ -0.98
CLDN4-203ENST00000435050 PAPPA-AS1Q5QFB9 102 aa8.95□□□□□ -0.98
CLDN4-203ENST00000435050 MTURNQ8N3F0 131 aa8.95□□□□□ -0.98
CLDN4-203ENST00000435050 UBR5O95071 2799 aaPredicted RBP8.95□□□□□ -0.98
CLDN4-203ENST00000435050 TRBV25-1A0A075B6N4 114 aa8.94□□□□□ -0.98
CLDN4-203ENST00000435050 A0A0U1RRA0 63 aa8.94□□□□□ -0.98
CLDN4-203ENST00000435050 MUC4Q99102 2169 aa8.94□□□□□ -0.98
CLDN4-203ENST00000435050 ATRQ13535 2644 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms