RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 MINOS1Q5TGZ0 78 aa8.62□□□□□ -1.03
HMGCS1-202ENST00000433297 Q6Q795 121 aa8.62□□□□□ -1.03
HMGCS1-202ENST00000433297 OTOGLQ3ZCN5 2332 aa8.62□□□□□ -1.03
HMGCS1-202ENST00000433297 ZFHX3Q15911 3703 aa8.62□□□□□ -1.03
HMGCS1-202ENST00000433297 IGHV3-73A0A0B4J1V6 119 aa8.61□□□□□ -1.03
HMGCS1-202ENST00000433297 RPL13AP40429 203 aaKnown RBP8.61□□□□□ -1.03
HMGCS1-202ENST00000433297 ADAMTSL4-AS1Q5T5F5 129 aa8.61□□□□□ -1.03
HMGCS1-202ENST00000433297 TIMM21Q9BVV7 248 aa8.61□□□□□ -1.03
HMGCS1-202ENST00000433297 MINOS1-NBL1R4GNA1 71 aa8.61□□□□□ -1.03
HMGCS1-202ENST00000433297 TRBV30A0A0K0K1B3 111 aa8.61□□□□□ -1.03
HMGCS1-202ENST00000433297 A0A0U1RRA0 63 aa8.61□□□□□ -1.03
HMGCS1-202ENST00000433297 UBTD1Q9HAC8 227 aa8.61□□□□□ -1.03
HMGCS1-202ENST00000433297 MDFICQ9P1T7 246 aa8.61□□□□□ -1.03
HMGCS1-202ENST00000433297 TTC28Q96AY4 2481 aa8.61□□□□□ -1.03
HMGCS1-202ENST00000433297 SORL1Q92673 2214 aa8.61□□□□□ -1.03
HMGCS1-202ENST00000433297 OOSP1A8MZH6 123 aa8.6□□□□□ -1.03
HMGCS1-202ENST00000433297 TLN1Q9Y490 2541 aaKnown RBP8.6□□□□□ -1.03
HMGCS1-202ENST00000433297 TRGV11A0A075B6L2 103 aa8.6□□□□□ -1.03
HMGCS1-202ENST00000433297 TRAV41A0A0B4J266 112 aa8.6□□□□□ -1.03
HMGCS1-202ENST00000433297 TRBV27A0A0K0K1C4 114 aa8.6□□□□□ -1.03
HMGCS1-202ENST00000433297 FAM236AA0A1B0GUQ0 79 aa8.6□□□□□ -1.03
HMGCS1-202ENST00000433297 FAM236BA0A1B0GV22 79 aa8.6□□□□□ -1.03
HMGCS1-202ENST00000433297 M0QXV9 152 aa8.6□□□□□ -1.03
HMGCS1-202ENST00000433297 PIP4P1Q86T03 277 aa8.6□□□□□ -1.03
HMGCS1-202ENST00000433297 DUX5Q96PT3 197 aa8.6□□□□□ -1.03
HMGCS1-202ENST00000433297 SPTAN1Q13813 2472 aaKnown RBP8.6□□□□□ -1.03
HMGCS1-202ENST00000433297 CD28P10747 220 aa8.6□□□□□ -1.03
HMGCS1-202ENST00000433297 TMEM95Q3KNT9 176 aa8.6□□□□□ -1.03
HMGCS1-202ENST00000433297 PRO3102Q9H379 93 aa8.6□□□□□ -1.03
HMGCS1-202ENST00000433297 KLK9Q9UKQ9 250 aa8.6□□□□□ -1.03
HMGCS1-202ENST00000433297 BSNQ9UPA5 3926 aa8.59□□□□□ -1.03
HMGCS1-202ENST00000433297 RHPN1-AS1Q9BWJ2 59 aa8.59□□□□□ -1.03
HMGCS1-202ENST00000433297 NDUFA12Q9UI09 145 aa8.59□□□□□ -1.03
HMGCS1-202ENST00000433297 MED14OSP0DP75 135 aa8.59□□□□□ -1.03
HMGCS1-202ENST00000433297 PPDPFQ9H3Y8 114 aa8.59□□□□□ -1.03
HMGCS1-202ENST00000433297 EDN2P20800 178 aa8.59□□□□□ -1.04
HMGCS1-202ENST00000433297 Q8NA96 180 aa8.59□□□□□ -1.04
HMGCS1-202ENST00000433297 PRRC2AP48634 2157 aaKnown RBP8.58□□□□□ -1.04
HMGCS1-202ENST00000433297 I3L3M4 83 aa8.58□□□□□ -1.04
HMGCS1-202ENST00000433297 IGLV4-3A0A075B6K6 122 aa8.58□□□□□ -1.04
HMGCS1-202ENST00000433297 BRI3O95415 125 aa8.58□□□□□ -1.04
HMGCS1-202ENST00000433297 PF4V1P10720 104 aa8.58□□□□□ -1.04
HMGCS1-202ENST00000433297 C20orf203Q8NBC4 194 aa8.58□□□□□ -1.04
HMGCS1-202ENST00000433297 CELSR1Q9NYQ6 3014 aa8.58□□□□□ -1.04
HMGCS1-202ENST00000433297 ZFHX2Q9C0A1 2572 aaPredicted RBP8.58□□□□□ -1.04
HMGCS1-202ENST00000433297 M0QY20 66 aa8.57□□□□□ -1.04
HMGCS1-202ENST00000433297 SOCS3O14543 225 aa8.57□□□□□ -1.04
HMGCS1-202ENST00000433297 LY6EQ16553 131 aa8.57□□□□□ -1.04
HMGCS1-202ENST00000433297 ZNF625Q96I27 306 aaPredicted RBP8.57□□□□□ -1.04
HMGCS1-202ENST00000433297 TMEM101Q96IK0 257 aa8.57□□□□□ -1.04
HMGCS1-202ENST00000433297 COL12A1Q99715 3063 aa8.57□□□□□ -1.04
HMGCS1-202ENST00000433297 H3BT86 120 aa8.56□□□□□ -1.04
HMGCS1-202ENST00000433297 IGHV1-69P01742 117 aa8.56□□□□□ -1.04
HMGCS1-202ENST00000433297 CCL21O00585 134 aa8.56□□□□□ -1.04
HMGCS1-202ENST00000433297 POM121L12Q8N7R1 296 aa8.56□□□□□ -1.04
HMGCS1-202ENST00000433297 C5orf56Q8N8D9 126 aa8.56□□□□□ -1.04
HMGCS1-202ENST00000433297 CREBBPQ92793 2442 aa8.56□□□□□ -1.04
HMGCS1-202ENST00000433297 C9orf153Q5TBE3 101 aa8.56□□□□□ -1.04
HMGCS1-202ENST00000433297 SIRPDQ9H106 197 aa8.56□□□□□ -1.04
HMGCS1-202ENST00000433297 NDUFA4O00483 81 aa8.55□□□□□ -1.04
HMGCS1-202ENST00000433297 BRD3OSQ6XYD6 125 aa8.55□□□□□ -1.04
HMGCS1-202ENST00000433297 FAM19A4Q96LR4 140 aa8.55□□□□□ -1.04
HMGCS1-202ENST00000433297 NXPH4O95158 308 aa8.55□□□□□ -1.04
HMGCS1-202ENST00000433297 ID1P41134 155 aa8.55□□□□□ -1.04
HMGCS1-202ENST00000433297 RHOHQ15669 191 aa8.55□□□□□ -1.04
HMGCS1-202ENST00000433297 SPINK13Q1W4C9 94 aa8.55□□□□□ -1.04
HMGCS1-202ENST00000433297 LITAFQ99732 161 aa8.55□□□□□ -1.04
HMGCS1-202ENST00000433297 VPREB3Q9UKI3 123 aa8.55□□□□□ -1.04
HMGCS1-202ENST00000433297 LST1O00453 97 aa8.54□□□□□ -1.04
HMGCS1-202ENST00000433297 LINC00694P0DN24 101 aa8.54□□□□□ -1.04
HMGCS1-202ENST00000433297 PROK1P58294 105 aa8.54□□□□□ -1.04
HMGCS1-202ENST00000433297 NSUN5P1Q3KNT7 163 aa8.54□□□□□ -1.04
HMGCS1-202ENST00000433297 MAP1AP78559 2803 aaPredicted RBP8.54□□□□□ -1.04
HMGCS1-202ENST00000433297 TRBV6-5A0A0K0K1A5 114 aa8.54□□□□□ -1.04
HMGCS1-202ENST00000433297 KNCNA6PVL3 124 aa8.54□□□□□ -1.04
HMGCS1-202ENST00000433297 CDSNQ15517 529 aa8.54□□□□□ -1.04
HMGCS1-202ENST00000433297 TNFRSF18Q9Y5U5 241 aa8.54□□□□□ -1.04
HMGCS1-202ENST00000433297 FAM223BA6NKX1 122 aa8.53□□□□□ -1.04
HMGCS1-202ENST00000433297 FAM223AQ8IWN6 122 aa8.53□□□□□ -1.04
HMGCS1-202ENST00000433297 LINC01587Q99440 93 aa8.53□□□□□ -1.04
HMGCS1-202ENST00000433297 IGHV1-58A0A0C4DH39 117 aa8.53□□□□□ -1.04
HMGCS1-202ENST00000433297 LOC107984640A0A0U1RRK4 108 aa8.53□□□□□ -1.04
HMGCS1-202ENST00000433297 KLLNB2CW77 178 aa8.53□□□□□ -1.04
HMGCS1-202ENST00000433297 NPFFO15130 113 aa8.53□□□□□ -1.04
HMGCS1-202ENST00000433297 MRPL23Q16540 153 aaKnown RBP8.53□□□□□ -1.04
HMGCS1-202ENST00000433297 MIAQ16674 131 aa8.53□□□□□ -1.04
HMGCS1-202ENST00000433297 KLK5Q9Y337 293 aaPredicted RBP8.53□□□□□ -1.04
HMGCS1-202ENST00000433297 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.53□□□□□ -1.044e-8■■■□□ 16.3
HMGCS1-202ENST00000433297 IGHV3-16A0A0C4DH30 117 aa8.53□□□□□ -1.04
HMGCS1-202ENST00000433297 TMEM61Q8N0U2 210 aa8.52□□□□□ -1.05
HMGCS1-202ENST00000433297 TMEM126AQ9H061 195 aa8.52□□□□□ -1.05
HMGCS1-202ENST00000433297 YAE1D1Q9NRH1 226 aa8.52□□□□□ -1.05
HMGCS1-202ENST00000433297 A0A0J9YX75 114 aa8.52□□□□□ -1.05
HMGCS1-202ENST00000433297 RS1O15537 224 aa8.52□□□□□ -1.05
HMGCS1-202ENST00000433297 NACAE9PAV3 2078 aa8.52□□□□□ -1.05
HMGCS1-202ENST00000433297 SPANXA1Q9NS26 97 aa8.52□□□□□ -1.05
HMGCS1-202ENST00000433297 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.51□□□□□ -1.05
HMGCS1-202ENST00000433297 IGKV2-29A2NJV5 120 aaPredicted RBP8.51□□□□□ -1.05
HMGCS1-202ENST00000433297 IGHV3-38A0A0C4DH36 116 aa8.51□□□□□ -1.05
HMGCS1-202ENST00000433297 PRM2P04554 102 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms