RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 TMEM208Q9BTX3 173 aa9.42□□□□□ -0.9
DDX56-204ENST00000431640 MRPL35Q9NZE8 188 aaKnown RBP9.42□□□□□ -0.9
DDX56-204ENST00000431640 SDHAF1A6NFY7 115 aa9.41□□□□□ -0.9
DDX56-204ENST00000431640 M0QY20 66 aa9.41□□□□□ -0.9
DDX56-204ENST00000431640 ZNF415Q09FC8 603 aa9.41□□□□□ -0.9
DDX56-204ENST00000431640 TMEM97Q5BJF2 176 aa9.41□□□□□ -0.9
DDX56-204ENST00000431640 ZFP2Q6ZN57 461 aa9.41□□□□□ -0.9
DDX56-204ENST00000431640 TMEM141Q96I45 108 aa9.41□□□□□ -0.9
DDX56-204ENST00000431640 EDA2RQ9HAV5 297 aa9.41□□□□□ -0.9
DDX56-204ENST00000431640 CHTOPQ9Y3Y2 248 aaKnown RBP9.41□□□□□ -0.9
DDX56-204ENST00000431640 A8MWV9 139 aa9.41□□□□□ -0.9
DDX56-204ENST00000431640 M0R2P5 195 aa9.41□□□□□ -0.9
DDX56-204ENST00000431640 INSP01308 110 aa9.41□□□□□ -0.9
DDX56-204ENST00000431640 SEC11AP67812 179 aa9.41□□□□□ -0.9
DDX56-204ENST00000431640 ZC2HC1BQ5TFG8 222 aa9.41□□□□□ -0.9
DDX56-204ENST00000431640 CITED2Q99967 270 aaPredicted RBP9.41□□□□□ -0.9
DDX56-204ENST00000431640 SPXQ9BT56 116 aa9.41□□□□□ -0.9
DDX56-204ENST00000431640 A0A1W2PRX2 142 aa9.4□□□□□ -0.9
DDX56-204ENST00000431640 RBMY1BA6NDE4 496 aaKnown RBP9.4□□□□□ -0.9
DDX56-204ENST00000431640 RBMY1EA6NEQ0 496 aaKnown RBP9.4□□□□□ -0.9
DDX56-204ENST00000431640 RBMY1DP0C7P1 496 aaKnown RBP9.4□□□□□ -0.9
DDX56-204ENST00000431640 RBMY1A1P0DJD3 496 aaKnown RBP9.4□□□□□ -0.9
DDX56-204ENST00000431640 RBMY1CP0DJD4 496 aa9.4□□□□□ -0.9
DDX56-204ENST00000431640 RIPPLY3P57055 190 aa9.4□□□□□ -0.9
DDX56-204ENST00000431640 HSD52Q0P140 79 aa9.4□□□□□ -0.9
DDX56-204ENST00000431640 RBMY1FQ15415 496 aaKnown RBP9.4□□□□□ -0.9
DDX56-204ENST00000431640 PAPPA-AS1Q5QFB9 102 aa9.4□□□□□ -0.9
DDX56-204ENST00000431640 LINC01587Q99440 93 aa9.4□□□□□ -0.9
DDX56-204ENST00000431640 HIGD1BQ9P298 99 aa9.4□□□□□ -0.9
DDX56-204ENST00000431640 COX11Q9Y6N1 276 aa9.4□□□□□ -0.9
DDX56-204ENST00000431640 RHOHQ15669 191 aa9.39□□□□□ -0.91
DDX56-204ENST00000431640 STHQ8IWL8 128 aa9.39□□□□□ -0.91
DDX56-204ENST00000431640 BAALCQ8WXS3 180 aa9.39□□□□□ -0.91
DDX56-204ENST00000431640 TP73-AS1Q9UF72 201 aa9.39□□□□□ -0.91
DDX56-204ENST00000431640 OR11H12B2RN74 326 aa9.38□□□□□ -0.91
DDX56-204ENST00000431640 I3L3M4 83 aa9.38□□□□□ -0.91
DDX56-204ENST00000431640 HTN1P15515 57 aa9.38□□□□□ -0.91
DDX56-204ENST00000431640 ZNF124Q15973 351 aa9.38□□□□□ -0.91
DDX56-204ENST00000431640 GTSCR1Q86UQ5 136 aa9.38□□□□□ -0.91
DDX56-204ENST00000431640 PCP2Q8IVA1 136 aa9.38□□□□□ -0.91
DDX56-204ENST00000431640 TIMM17AQ99595 171 aa9.38□□□□□ -0.91
DDX56-204ENST00000431640 AGRNO00468 2067 aa9.38□□□□□ -0.91
DDX56-204ENST00000431640 A6NDN8 102 aa9.37□□□□□ -0.91
DDX56-204ENST00000431640 PRSS29PA6NIE9 313 aa9.37□□□□□ -0.91
DDX56-204ENST00000431640 TP53TG1Q9Y2A0 90 aa9.37□□□□□ -0.91
DDX56-204ENST00000431640 IGIPA6NJ69 53 aa9.37□□□□□ -0.91
DDX56-204ENST00000431640 PMVKQ15126 192 aa9.37□□□□□ -0.91
DDX56-204ENST00000431640 NSUN5P1Q3KNT7 163 aa9.37□□□□□ -0.91
DDX56-204ENST00000431640 ODF3L2Q3SX64 289 aa9.37□□□□□ -0.91
DDX56-204ENST00000431640 NEGR1Q7Z3B1 354 aa9.37□□□□□ -0.91
DDX56-204ENST00000431640 FAM110AQ9BQ89 295 aa9.37□□□□□ -0.91
DDX56-204ENST00000431640 IGKV2D-26A0A0A0MRZ7 120 aa9.36□□□□□ -0.91
DDX56-204ENST00000431640 RHODO00212 210 aa9.36□□□□□ -0.91
DDX56-204ENST00000431640 MORN3Q6PF18 240 aaPredicted RBP9.36□□□□□ -0.91
DDX56-204ENST00000431640 CITED1Q99966 193 aa9.36□□□□□ -0.91
DDX56-204ENST00000431640 VWFP04275 2813 aa9.35□□□□□ -0.91
DDX56-204ENST00000431640 TCTAP57738 103 aa9.35□□□□□ -0.91
DDX56-204ENST00000431640 BEAN1Q3B7T3 259 aa9.35□□□□□ -0.91
DDX56-204ENST00000431640 TAX1BP3O14907 124 aa9.34□□□□□ -0.91
DDX56-204ENST00000431640 UFSP1Q6NVU6 142 aa9.34□□□□□ -0.91
DDX56-204ENST00000431640 SPATA3Q8NHX4 192 aa9.34□□□□□ -0.91
DDX56-204ENST00000431640 DNAJC30Q96LL9 226 aa9.34□□□□□ -0.91
DDX56-204ENST00000431640 TNFRSF18Q9Y5U5 241 aa9.34□□□□□ -0.91
DDX56-204ENST00000431640 ANK2Q01484 3957 aa9.34□□□□□ -0.91
DDX56-204ENST00000431640 SAP30O75446 220 aa9.33□□□□□ -0.92
DDX56-204ENST00000431640 TAL2Q16559 108 aa9.33□□□□□ -0.92
DDX56-204ENST00000431640 C11orf72Q8NBR9 251 aa9.33□□□□□ -0.92
DDX56-204ENST00000431640 OR11H2Q8NH07 326 aa9.33□□□□□ -0.92
DDX56-204ENST00000431640 CST9LQ9H4G1 147 aa9.33□□□□□ -0.92
DDX56-204ENST00000431640 TRBV25-1A0A075B6N4 114 aa9.33□□□□□ -0.92
DDX56-204ENST00000431640 H3BRM9 83 aa9.33□□□□□ -0.92
DDX56-204ENST00000431640 TSHBP01222 138 aa9.33□□□□□ -0.92
DDX56-204ENST00000431640 IGLV1-51P01701 117 aa9.33□□□□□ -0.92
DDX56-204ENST00000431640 UBE2V1Q13404 147 aa9.33□□□□□ -0.92
DDX56-204ENST00000431640 CFAP126Q5VTH2 177 aa9.33□□□□□ -0.92
DDX56-204ENST00000431640 C20orf203Q8NBC4 194 aa9.33□□□□□ -0.92
DDX56-204ENST00000431640 XCL2Q9UBD3 114 aa9.33□□□□□ -0.92
DDX56-204ENST00000431640 SORL1Q92673 2214 aa9.32□□□□□ -0.92
DDX56-204ENST00000431640 E9PLD3 99 aa9.32□□□□□ -0.92
DDX56-204ENST00000431640 RS1O15537 224 aa9.32□□□□□ -0.92
DDX56-204ENST00000431640 HERVK_113P61574 105 aa9.32□□□□□ -0.92
DDX56-204ENST00000431640 RPL39P62891 51 aaKnown RBP9.32□□□□□ -0.92
DDX56-204ENST00000431640 NDUFA11Q86Y39 141 aa9.32□□□□□ -0.92
DDX56-204ENST00000431640 TRRAPQ9Y4A5 3859 aa9.31□□□□□ -0.92
DDX56-204ENST00000431640 STAB1Q9NY15 2570 aa9.31□□□□□ -0.92
DDX56-204ENST00000431640 TRAV8-6A0A0B4J262 113 aa9.31□□□□□ -0.92
DDX56-204ENST00000431640 NPSP0C0P6 89 aa9.31□□□□□ -0.92
DDX56-204ENST00000431640 CRYBA4P53673 196 aa9.31□□□□□ -0.92
DDX56-204ENST00000431640 PTTG1IPP53801 180 aa9.31□□□□□ -0.92
DDX56-204ENST00000431640 VAMP3Q15836 100 aa9.31□□□□□ -0.92
DDX56-204ENST00000431640 MDFIQ99750 246 aa9.31□□□□□ -0.92
DDX56-204ENST00000431640 CHAC1Q9BUX1 264 aa9.31□□□□□ -0.92
DDX56-204ENST00000431640 MYMXA0A1B0GTQ4 84 aa9.3□□□□□ -0.92
DDX56-204ENST00000431640 IGHV3-53P01767 116 aa9.3□□□□□ -0.92
DDX56-204ENST00000431640 P0DMU3 169 aa9.3□□□□□ -0.92
DDX56-204ENST00000431640 FAM231AP0DMU4 169 aa9.3□□□□□ -0.92
DDX56-204ENST00000431640 FAM231CP0DMU5 169 aa9.3□□□□□ -0.92
DDX56-204ENST00000431640 C1orf158Q8N1D5 194 aa9.3□□□□□ -0.92
DDX56-204ENST00000431640 C1QTNF4Q9BXJ3 329 aa9.3□□□□□ -0.92
DDX56-204ENST00000431640 PYGO1Q9Y3Y4 419 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms