RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 PRRC2AP48634 2157 aaKnown RBP8.28□□□□□ -1.08
SEMA4D-209ENST00000429836 ZFHX3Q15911 3703 aa8.28□□□□□ -1.08
SEMA4D-209ENST00000429836 NCOR2Q9Y618 2525 aa8.28□□□□□ -1.08
SEMA4D-209ENST00000429836 TRGV11A0A075B6L2 103 aa8.28□□□□□ -1.08
SEMA4D-209ENST00000429836 ADAMTSL4-AS1Q5T5F5 129 aa8.28□□□□□ -1.08
SEMA4D-209ENST00000429836 LINC00477Q96M19 166 aa8.28□□□□□ -1.08
SEMA4D-209ENST00000429836 SPXQ9BT56 116 aa8.28□□□□□ -1.08
SEMA4D-209ENST00000429836 LINC00694P0DN24 101 aa8.27□□□□□ -1.09
SEMA4D-209ENST00000429836 IGHV4OR15-8A0A075B7B6 117 aa8.27□□□□□ -1.09
SEMA4D-209ENST00000429836 A0A087WW49 117 aa8.27□□□□□ -1.09
SEMA4D-209ENST00000429836 TRAV8-3A0A0A6YYJ7 113 aa8.27□□□□□ -1.09
SEMA4D-209ENST00000429836 B9A039 149 aa8.27□□□□□ -1.09
SEMA4D-209ENST00000429836 RPL11P62913 178 aaKnown RBP8.27□□□□□ -1.09
SEMA4D-209ENST00000429836 C9orf139Q6ZV77 190 aa8.27□□□□□ -1.09
SEMA4D-209ENST00000429836 LINC01600Q96MT4 127 aa8.27□□□□□ -1.09
SEMA4D-209ENST00000429836 LOC107984640A0A0U1RRK4 108 aa8.26□□□□□ -1.09
SEMA4D-209ENST00000429836 OOSP1A8MZH6 123 aa8.26□□□□□ -1.09
SEMA4D-209ENST00000429836 EEF1AKMT3Q96AZ1 226 aa8.26□□□□□ -1.09
SEMA4D-209ENST00000429836 LENEPQ9Y5L5 61 aa8.26□□□□□ -1.09
SEMA4D-209ENST00000429836 U3KQE9 123 aa8.26□□□□□ -1.09
SEMA4D-209ENST00000429836 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.26□□□□□ -1.09
SEMA4D-209ENST00000429836 POM121L12Q8N7R1 296 aa8.26□□□□□ -1.09
SEMA4D-209ENST00000429836 LITAFQ99732 161 aa8.26□□□□□ -1.09
SEMA4D-209ENST00000429836 TMEM126AQ9H061 195 aa8.26□□□□□ -1.09
SEMA4D-209ENST00000429836 A8MZ25 164 aa8.25□□□□□ -1.09
SEMA4D-209ENST00000429836 CD3EP07766 207 aa8.25□□□□□ -1.09
SEMA4D-209ENST00000429836 UNQ9165/PRO28630Q6UXU0 137 aa8.25□□□□□ -1.09
SEMA4D-209ENST00000429836 KLK5Q9Y337 293 aaPredicted RBP8.25□□□□□ -1.09
SEMA4D-209ENST00000429836 H3BT86 120 aa8.25□□□□□ -1.09
SEMA4D-209ENST00000429836 IGHV3-30-3P0DP02 117 aa8.25□□□□□ -1.09
SEMA4D-209ENST00000429836 MRPL23Q16540 153 aaKnown RBP8.25□□□□□ -1.09
SEMA4D-209ENST00000429836 SPG11Q96JI7 2443 aa8.25□□□□□ -1.09
SEMA4D-209ENST00000429836 PTPRQQ9UMZ3 2332 aa8.25□□□□□ -1.09
SEMA4D-209ENST00000429836 TRBV7-7A0A0K0K1E9 115 aa8.24□□□□□ -1.09
SEMA4D-209ENST00000429836 EBI3Q14213 229 aa8.24□□□□□ -1.09
SEMA4D-209ENST00000429836 TRBV27A0A0K0K1C4 114 aa8.24□□□□□ -1.09
SEMA4D-209ENST00000429836 I3L3M4 83 aa8.24□□□□□ -1.09
SEMA4D-209ENST00000429836 TRBV12-3P01733 135 aa8.24□□□□□ -1.09
SEMA4D-209ENST00000429836 MED14OSP0DP75 135 aa8.24□□□□□ -1.09
SEMA4D-209ENST00000429836 RNASE13Q5GAN3 156 aaKnown RBP8.24□□□□□ -1.09
SEMA4D-209ENST00000429836 C9orf153Q5TBE3 101 aa8.24□□□□□ -1.09
SEMA4D-209ENST00000429836 LINC01560Q8TB33 94 aa8.24□□□□□ -1.09
SEMA4D-209ENST00000429836 TMEM101Q96IK0 257 aa8.24□□□□□ -1.09
SEMA4D-209ENST00000429836 SPANXA1Q9NS26 97 aa8.24□□□□□ -1.09
SEMA4D-209ENST00000429836 CSDC2Q9Y534 153 aaKnown RBP8.24□□□□□ -1.09
SEMA4D-209ENST00000429836 LST1O00453 97 aa8.23□□□□□ -1.09
SEMA4D-209ENST00000429836 OVOL1O14753 267 aa8.23□□□□□ -1.09
SEMA4D-209ENST00000429836 NXPH4O95158 308 aa8.23□□□□□ -1.09
SEMA4D-209ENST00000429836 COX6CP09669 75 aa8.23□□□□□ -1.09
SEMA4D-209ENST00000429836 DAND5Q8N907 189 aa8.23□□□□□ -1.09
SEMA4D-209ENST00000429836 DUX5Q96PT3 197 aa8.23□□□□□ -1.09
SEMA4D-209ENST00000429836 CUBNO60494 3623 aa8.23□□□□□ -1.09
SEMA4D-209ENST00000429836 FAM240AA0A1B0GVK7 77 aa8.23□□□□□ -1.09
SEMA4D-209ENST00000429836 IGFL3Q6UXB1 125 aa8.23□□□□□ -1.09
SEMA4D-209ENST00000429836 SMCR5Q8TEV8 140 aa8.23□□□□□ -1.09
SEMA4D-209ENST00000429836 TIMM21Q9BVV7 248 aa8.23□□□□□ -1.09
SEMA4D-209ENST00000429836 IGLV4-3A0A075B6K6 122 aa8.22□□□□□ -1.09
SEMA4D-209ENST00000429836 M0R1W7 72 aa8.22□□□□□ -1.09
SEMA4D-209ENST00000429836 IGHV1-69P01742 117 aa8.22□□□□□ -1.09
SEMA4D-209ENST00000429836 SOCS3O14543 225 aa8.22□□□□□ -1.09
SEMA4D-209ENST00000429836 FAM19A4Q96LR4 140 aa8.22□□□□□ -1.09
SEMA4D-209ENST00000429836 HRNRQ86YZ3 2850 aaPredicted RBP8.22□□□□□ -1.09
SEMA4D-209ENST00000429836 TRBV7-1A0A0A6YYK4 115 aa8.21□□□□□ -1.09
SEMA4D-209ENST00000429836 TRAV12-3A0A0B4J271 114 aa8.21□□□□□ -1.09
SEMA4D-209ENST00000429836 A0A0J9YX75 114 aa8.21□□□□□ -1.09
SEMA4D-209ENST00000429836 DEFB121Q5J5C9 76 aa8.21□□□□□ -1.09
SEMA4D-209ENST00000429836 NRGNQ92686 78 aa8.21□□□□□ -1.09
SEMA4D-209ENST00000429836 C20orf203Q8NBC4 194 aa8.21□□□□□ -1.1
SEMA4D-209ENST00000429836 M0QY20 66 aa8.2□□□□□ -1.1
SEMA4D-209ENST00000429836 NDUFA7O95182 113 aa8.2□□□□□ -1.1
SEMA4D-209ENST00000429836 NDUFA12Q9UI09 145 aa8.2□□□□□ -1.1
SEMA4D-209ENST00000429836 HERVK_113P63121 156 aa8.2□□□□□ -1.1
SEMA4D-209ENST00000429836 NSUN5P1Q3KNT7 163 aa8.2□□□□□ -1.1
SEMA4D-209ENST00000429836 C3orf22Q8N5N4 141 aa8.2□□□□□ -1.1
SEMA4D-209ENST00000429836 VPS13CQ709C8 3753 aa8.2□□□□□ -1.1
SEMA4D-209ENST00000429836 ZFP36P26651 326 aaKnown RBP8.2□□□□□ -1.1
SEMA4D-209ENST00000429836 MIAQ16674 131 aa8.2□□□□□ -1.1
SEMA4D-209ENST00000429836 MINOS1Q5TGZ0 78 aa8.2□□□□□ -1.1
SEMA4D-209ENST00000429836 TMEM219Q86XT9 240 aa8.2□□□□□ -1.1
SEMA4D-209ENST00000429836 DNAJC30Q96LL9 226 aa8.2□□□□□ -1.1
SEMA4D-209ENST00000429836 TRBV6-5A0A0K0K1A5 114 aa8.19□□□□□ -1.1
SEMA4D-209ENST00000429836 GRNP28799 593 aaKnown RBP8.19□□□□□ -1.1
SEMA4D-209ENST00000429836 TMEM61Q8N0U2 210 aa8.19□□□□□ -1.1
SEMA4D-209ENST00000429836 NPFFO15130 113 aa8.19□□□□□ -1.1
SEMA4D-209ENST00000429836 IGKV3-20P01619 116 aa8.19□□□□□ -1.1
SEMA4D-209ENST00000429836 IGHV3-11P01762 117 aa8.19□□□□□ -1.1
SEMA4D-209ENST00000429836 APRG1Q8IVJ8 170 aa8.19□□□□□ -1.1
SEMA4D-209ENST00000429836 TRAV41A0A0B4J266 112 aa8.18□□□□□ -1.1
SEMA4D-209ENST00000429836 CD28P10747 220 aa8.18□□□□□ -1.1
SEMA4D-209ENST00000429836 RHOHQ15669 191 aa8.18□□□□□ -1.1
SEMA4D-209ENST00000429836 C5orf47Q569G3 176 aa8.18□□□□□ -1.1
SEMA4D-209ENST00000429836 TRAV12-2A0A075B6T6 113 aa8.18□□□□□ -1.1
SEMA4D-209ENST00000429836 EDN2P20800 178 aa8.18□□□□□ -1.1
SEMA4D-209ENST00000429836 SPANXDQ9BXN6 97 aa8.18□□□□□ -1.1
SEMA4D-209ENST00000429836 SPANXCQ9NY87 97 aa8.18□□□□□ -1.1
SEMA4D-209ENST00000429836 FAM104AQ969W3 186 aa8.17□□□□□ -1.1
SEMA4D-209ENST00000429836 MINOS1-NBL1R4GNA1 71 aa8.17□□□□□ -1.1
SEMA4D-209ENST00000429836 PIEZO1Q92508 2521 aa8.17□□□□□ -1.1
SEMA4D-209ENST00000429836 A0A0U1RRA0 63 aa8.17□□□□□ -1.1
SEMA4D-209ENST00000429836 SORL1Q92673 2214 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms