RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 PRADC1Q9BSG0 188 aa11.97□□□□□ -0.49
LINC00887-203ENST00000429578 NIT2Q9NQR4 276 aa11.97□□□□□ -0.49
LINC00887-203ENST00000429578 RPL39LQ96EH5 51 aaKnown RBP11.96□□□□□ -0.49
LINC00887-203ENST00000429578 ALKBH7Q9BT30 221 aaPredicted RBP11.96□□□□□ -0.49
LINC00887-203ENST00000429578 Q9UF83 564 aa11.96□□□□□ -0.49
LINC00887-203ENST00000429578 LAMTOR2Q9Y2Q5 125 aa11.96□□□□□ -0.49
LINC00887-203ENST00000429578 TRAV26-1A0A087WT03 109 aa11.95□□□□□ -0.5
LINC00887-203ENST00000429578 PAX4O43316 350 aa11.95□□□□□ -0.5
LINC00887-203ENST00000429578 OR10J3Q5JRS4 329 aa11.95□□□□□ -0.5
LINC00887-203ENST00000429578 VSIG2Q96IQ7 327 aa11.95□□□□□ -0.5
LINC00887-203ENST00000429578 TNFRSF6BO95407 300 aa11.94□□□□□ -0.5
LINC00887-203ENST00000429578 NPYP01303 97 aa11.94□□□□□ -0.5
LINC00887-203ENST00000429578 SRIP30626 198 aa11.94□□□□□ -0.5
LINC00887-203ENST00000429578 NEXN-AS1Q8NBZ9 246 aa11.94□□□□□ -0.5
LINC00887-203ENST00000429578 DNAJC30Q96LL9 226 aa11.94□□□□□ -0.5
LINC00887-203ENST00000429578 TMA7Q9Y2S6 64 aaKnown RBP11.94□□□□□ -0.5
LINC00887-203ENST00000429578 DNAH7Q8WXX0 4024 aa11.94□□□□□ -0.5
LINC00887-203ENST00000429578 A0A0J9YY99 117 aa11.94□□□□□ -0.5
LINC00887-203ENST00000429578 TRBV6-5A0A0K0K1A5 114 aa11.94□□□□□ -0.5
LINC00887-203ENST00000429578 PHLDA1Q8WV24 401 aaPredicted RBP11.94□□□□□ -0.5
LINC00887-203ENST00000429578 TRBV7-3A0A075B6L6 115 aa11.93□□□□□ -0.5
LINC00887-203ENST00000429578 LOC100131303A0A0U1RQF7 123 aa11.93□□□□□ -0.5
LINC00887-203ENST00000429578 H3BNG1 76 aa11.93□□□□□ -0.5
LINC00887-203ENST00000429578 RPL36AP83881 106 aaKnown RBP11.93□□□□□ -0.5
LINC00887-203ENST00000429578 RPL36ALQ969Q0 106 aaKnown RBP11.93□□□□□ -0.5
LINC00887-203ENST00000429578 TNFRSF18Q9Y5U5 241 aa11.93□□□□□ -0.5
LINC00887-203ENST00000429578 GYPEP15421 78 aa11.92□□□□□ -0.5
LINC00887-203ENST00000429578 CASC10Q5T4H9 136 aa11.92□□□□□ -0.5
LINC00887-203ENST00000429578 ZNRF2Q8NHG8 242 aa11.92□□□□□ -0.5
LINC00887-203ENST00000429578 C20orf78Q9BR46 151 aa11.92□□□□□ -0.5
LINC00887-203ENST00000429578 SUMO2P61956 95 aaKnown RBP11.91□□□□□ -0.5
LINC00887-203ENST00000429578 SVIPQ8NHG7 77 aa11.91□□□□□ -0.5
LINC00887-203ENST00000429578 ST20Q9HBF5 79 aa11.91□□□□□ -0.5
LINC00887-203ENST00000429578 GAGE12JA6NER3 117 aa11.91□□□□□ -0.5
LINC00887-203ENST00000429578 GAGE1Q13065 139 aa11.91□□□□□ -0.5
LINC00887-203ENST00000429578 GAGE4Q13068 117 aa11.91□□□□□ -0.5
LINC00887-203ENST00000429578 GAGE5Q13069 117 aa11.91□□□□□ -0.5
LINC00887-203ENST00000429578 GAGE13Q4V321 117 aa11.91□□□□□ -0.5
LINC00887-203ENST00000429578 SDHAF1A6NFY7 115 aa11.9□□□□□ -0.5
LINC00887-203ENST00000429578 PRSS47A8MTI9 375 aa11.9□□□□□ -0.5
LINC00887-203ENST00000429578 C1orf196B1AJZ1 125 aa11.9□□□□□ -0.5
LINC00887-203ENST00000429578 TMEM70Q9BUB7 260 aa11.9□□□□□ -0.5
LINC00887-203ENST00000429578 MAP1LC3AQ9H492 121 aa11.9□□□□□ -0.5
LINC00887-203ENST00000429578 LINC00694P0DN24 101 aa11.89□□□□□ -0.51
LINC00887-203ENST00000429578 POLR2KP53803 58 aaKnown RBP11.89□□□□□ -0.51
LINC00887-203ENST00000429578 UBE2D3P61077 147 aa11.89□□□□□ -0.51
LINC00887-203ENST00000429578 UBE2D2P62837 147 aa11.89□□□□□ -0.51
LINC00887-203ENST00000429578 C18orf32Q8TCD1 76 aa11.89□□□□□ -0.51
LINC00887-203ENST00000429578 HIST1H2BKO60814 126 aa11.89□□□□□ -0.51
LINC00887-203ENST00000429578 HIST1H2BJP06899 126 aa11.89□□□□□ -0.51
LINC00887-203ENST00000429578 HIST1H2BOP23527 126 aa11.89□□□□□ -0.51
LINC00887-203ENST00000429578 HIST1H2BBP33778 126 aa11.89□□□□□ -0.51
LINC00887-203ENST00000429578 HIST1H2BDP58876 126 aa11.89□□□□□ -0.51
LINC00887-203ENST00000429578 HIST1H2BCP62807 126 aa11.89□□□□□ -0.51
LINC00887-203ENST00000429578 MRPL23Q16540 153 aaKnown RBP11.89□□□□□ -0.51
LINC00887-203ENST00000429578 HIST2H2BEQ16778 126 aa11.89□□□□□ -0.51
LINC00887-203ENST00000429578 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.89□□□□□ -0.51
LINC00887-203ENST00000429578 HIST1H2BHQ93079 126 aa11.89□□□□□ -0.51
LINC00887-203ENST00000429578 HIST1H2BNQ99877 126 aa11.89□□□□□ -0.51
LINC00887-203ENST00000429578 HIST1H2BMQ99879 126 aa11.89□□□□□ -0.51
LINC00887-203ENST00000429578 ICOSQ9Y6W8 199 aa11.89□□□□□ -0.51
LINC00887-203ENST00000429578 RPL32P62910 135 aaKnown RBP11.88□□□□□ -0.51
LINC00887-203ENST00000429578 SMIM2Q9BVW6 85 aa11.88□□□□□ -0.51
LINC00887-203ENST00000429578 TRBV27A0A0K0K1C4 114 aa11.87□□□□□ -0.51
LINC00887-203ENST00000429578 LOC389332A0A1B0GUA5 103 aa11.87□□□□□ -0.51
LINC00887-203ENST00000429578 CEMP1Q6PRD7 247 aaPredicted RBP11.87□□□□□ -0.51
LINC00887-203ENST00000429578 DAZ4Q86SG3 579 aaKnown RBP11.87□□□□□ -0.51
LINC00887-203ENST00000429578 DAZ3Q9NR90 486 aaKnown RBP11.87□□□□□ -0.51
LINC00887-203ENST00000429578 A0A096LPF7 62 aa11.86□□□□□ -0.51
LINC00887-203ENST00000429578 NUPR2A6NF83 97 aa11.86□□□□□ -0.51
LINC00887-203ENST00000429578 VCYO14598 125 aa11.86□□□□□ -0.51
LINC00887-203ENST00000429578 IQCJQ1A5X6 159 aa11.86□□□□□ -0.51
LINC00887-203ENST00000429578 ZFAND6Q6FIF0 208 aa11.86□□□□□ -0.51
LINC00887-203ENST00000429578 CSMD3Q7Z407 3707 aa11.86□□□□□ -0.51
LINC00887-203ENST00000429578 IGLV2-18A0A075B6J9 118 aa11.86□□□□□ -0.51
LINC00887-203ENST00000429578 IGLL5B9A064 214 aa11.86□□□□□ -0.51
LINC00887-203ENST00000429578 I3L3M4 83 aa11.86□□□□□ -0.51
LINC00887-203ENST00000429578 PMCHP20382 165 aa11.86□□□□□ -0.51
LINC00887-203ENST00000429578 RAB5BP61020 215 aa11.86□□□□□ -0.51
LINC00887-203ENST00000429578 Q0VG73 95 aa11.86□□□□□ -0.51
LINC00887-203ENST00000429578 SH2D6Q7Z4S9 175 aa11.86□□□□□ -0.51
LINC00887-203ENST00000429578 C15orf53Q8NAA6 179 aa11.86□□□□□ -0.51
LINC00887-203ENST00000429578 DYNC2H1Q8NCM8 4307 aaKnown RBP11.85□□□□□ -0.51
LINC00887-203ENST00000429578 IFI27P40305 119 aaPredicted RBP11.85□□□□□ -0.51
LINC00887-203ENST00000429578 Q8N8P6 123 aa11.85□□□□□ -0.51
LINC00887-203ENST00000429578 ATP6V0E2Q8NHE4 81 aa11.85□□□□□ -0.51
LINC00887-203ENST00000429578 PRSS3P2Q8NHM4 247 aa11.85□□□□□ -0.51
LINC00887-203ENST00000429578 NXT2Q9NPJ8 142 aaKnown RBP11.85□□□□□ -0.51
LINC00887-203ENST00000429578 SACSQ9NZJ4 4579 aa11.84□□□□□ -0.51
LINC00887-203ENST00000429578 IGHV3-38A0A0C4DH36 116 aa11.84□□□□□ -0.51
LINC00887-203ENST00000429578 NUDT3O95989 172 aa11.84□□□□□ -0.51
LINC00887-203ENST00000429578 NEGR1Q7Z3B1 354 aa11.84□□□□□ -0.51
LINC00887-203ENST00000429578 KIR2DL4Q99706 377 aa11.83□□□□□ -0.52
LINC00887-203ENST00000429578 KLK5Q9Y337 293 aaPredicted RBP11.83□□□□□ -0.52
LINC00887-203ENST00000429578 STARD9Q9P2P6 4700 aa11.82□□□□□ -0.52
LINC00887-203ENST00000429578 NIT1Q86X76 327 aa11.82□□□□□ -0.52
LINC00887-203ENST00000429578 BAGE3Q86Y29 109 aa11.82□□□□□ -0.52
LINC00887-203ENST00000429578 K7EMI3 77 aa11.81□□□□□ -0.52
LINC00887-203ENST00000429578 LINC00614P0C842 121 aa11.81□□□□□ -0.52
LINC00887-203ENST00000429578 COTL1Q14019 142 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms