RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 LINC01356Q8N9X3 169 aa8.48□□□□□ -1.05
LINC01238-203ENST00000429456 C20orf203Q8NBC4 194 aa8.48□□□□□ -1.05
LINC01238-203ENST00000429456 SPG11Q96JI7 2443 aa8.47□□□□□ -1.05
LINC01238-203ENST00000429456 TRGV11A0A075B6L2 103 aa8.47□□□□□ -1.05
LINC01238-203ENST00000429456 I3L3M4 83 aa8.47□□□□□ -1.05
LINC01238-203ENST00000429456 LEPROTO15243 131 aa8.47□□□□□ -1.05
LINC01238-203ENST00000429456 CFC1BP0CG36 223 aa8.47□□□□□ -1.05
LINC01238-203ENST00000429456 CFC1P0CG37 223 aa8.47□□□□□ -1.05
LINC01238-203ENST00000429456 LGALS3P17931 250 aaKnown RBP8.47□□□□□ -1.05
LINC01238-203ENST00000429456 LOC107984156A0A0G2JMH3 177 aa8.46□□□□□ -1.05
LINC01238-203ENST00000429456 AZU1P20160 251 aa8.46□□□□□ -1.05
LINC01238-203ENST00000429456 PSMB2P49721 201 aa8.46□□□□□ -1.05
LINC01238-203ENST00000429456 INSL3P51460 131 aa8.46□□□□□ -1.05
LINC01238-203ENST00000429456 CKS1BP61024 79 aa8.46□□□□□ -1.05
LINC01238-203ENST00000429456 ARL17AQ8IVW1 177 aa8.46□□□□□ -1.05
LINC01238-203ENST00000429456 ATP6V0E2Q8NHE4 81 aa8.46□□□□□ -1.05
LINC01238-203ENST00000429456 GTSF1LQ9H1H1 148 aa8.46□□□□□ -1.05
LINC01238-203ENST00000429456 ITPR1Q14643 2758 aa8.46□□□□□ -1.05
LINC01238-203ENST00000429456 ELANEP08246 267 aa8.46□□□□□ -1.06
LINC01238-203ENST00000429456 LYRM7Q5U5X0 104 aa8.46□□□□□ -1.06
LINC01238-203ENST00000429456 NRGNQ92686 78 aa8.46□□□□□ -1.06
LINC01238-203ENST00000429456 DUX5Q96PT3 197 aa8.46□□□□□ -1.06
LINC01238-203ENST00000429456 A0A096LNT2 108 aa8.45□□□□□ -1.06
LINC01238-203ENST00000429456 J3QLI3 93 aa8.45□□□□□ -1.06
LINC01238-203ENST00000429456 ZNF22P17026 224 aaPredicted RBP8.45□□□□□ -1.06
LINC01238-203ENST00000429456 HOXD3P31249 432 aaPredicted RBP8.45□□□□□ -1.06
LINC01238-203ENST00000429456 SFTA2Q6UW10 78 aa8.45□□□□□ -1.06
LINC01238-203ENST00000429456 CITED2Q99967 270 aaPredicted RBP8.45□□□□□ -1.06
LINC01238-203ENST00000429456 EDA2RQ9HAV5 297 aa8.45□□□□□ -1.06
LINC01238-203ENST00000429456 DOPEY2Q9Y3R5 2298 aa8.45□□□□□ -1.06
LINC01238-203ENST00000429456 IGLV4-3A0A075B6K6 122 aa8.45□□□□□ -1.06
LINC01238-203ENST00000429456 RHODO00212 210 aa8.45□□□□□ -1.06
LINC01238-203ENST00000429456 RBMY1A1P0DJD3 496 aaKnown RBP8.45□□□□□ -1.06
LINC01238-203ENST00000429456 RBMY1CP0DJD4 496 aa8.45□□□□□ -1.06
LINC01238-203ENST00000429456 RBMY1FQ15415 496 aaKnown RBP8.45□□□□□ -1.06
LINC01238-203ENST00000429456 C10orf126Q8N4M7 172 aa8.45□□□□□ -1.06
LINC01238-203ENST00000429456 UBE2E2Q96LR5 201 aa8.45□□□□□ -1.06
LINC01238-203ENST00000429456 C1QTNF4Q9BXJ3 329 aa8.45□□□□□ -1.06
LINC01238-203ENST00000429456 SORL1Q92673 2214 aa8.44□□□□□ -1.06
LINC01238-203ENST00000429456 FOXI1Q12951 378 aa8.44□□□□□ -1.06
LINC01238-203ENST00000429456 ZNF702PQ9H963 129 aa8.44□□□□□ -1.06
LINC01238-203ENST00000429456 YAE1D1Q9NRH1 226 aa8.44□□□□□ -1.06
LINC01238-203ENST00000429456 VPREB3Q9UKI3 123 aa8.44□□□□□ -1.06
LINC01238-203ENST00000429456 TCL1BO95988 128 aa8.44□□□□□ -1.06
LINC01238-203ENST00000429456 VCX2Q9H322 139 aa8.44□□□□□ -1.06
LINC01238-203ENST00000429456 PRO1854Q9UHT4 67 aa8.44□□□□□ -1.06
LINC01238-203ENST00000429456 TRBV20-1A0A075B6N2 111 aa8.43□□□□□ -1.06
LINC01238-203ENST00000429456 A0A0J9YXV3 536 aa8.43□□□□□ -1.06
LINC01238-203ENST00000429456 SMAGPQ0VAQ4 97 aa8.43□□□□□ -1.06
LINC01238-203ENST00000429456 PYGO1Q9Y3Y4 419 aa8.43□□□□□ -1.06
LINC01238-203ENST00000429456 KNCNA6PVL3 124 aa8.42□□□□□ -1.06
LINC01238-203ENST00000429456 A8MTW9 85 aa8.42□□□□□ -1.06
LINC01238-203ENST00000429456 TGFAP01135 160 aa8.42□□□□□ -1.06
LINC01238-203ENST00000429456 TCTEX1D4Q5JR98 221 aa8.42□□□□□ -1.06
LINC01238-203ENST00000429456 FAM104AQ969W3 186 aa8.42□□□□□ -1.06
LINC01238-203ENST00000429456 EIF4EBP3O60516 100 aaPredicted RBP8.42□□□□□ -1.06
LINC01238-203ENST00000429456 FSHBP01225 129 aa8.42□□□□□ -1.06
LINC01238-203ENST00000429456 Q6YL49 198 aa8.42□□□□□ -1.06
LINC01238-203ENST00000429456 SBSPONQ8IVN8 264 aa8.42□□□□□ -1.06
LINC01238-203ENST00000429456 SS18L2Q9UHA2 77 aa8.42□□□□□ -1.06
LINC01238-203ENST00000429456 DOPEY1Q5JWR5 2465 aa8.42□□□□□ -1.06
LINC01238-203ENST00000429456 COL12A1Q99715 3063 aa8.41□□□□□ -1.06
LINC01238-203ENST00000429456 ZNF418Q8TF45 676 aaPredicted RBP8.41□□□□□ -1.06
LINC01238-203ENST00000429456 IGHV3-64A0A075B6Q5 118 aa8.41□□□□□ -1.06
LINC01238-203ENST00000429456 IGHV3-73A0A0B4J1V6 119 aa8.41□□□□□ -1.06
LINC01238-203ENST00000429456 M0R2P5 195 aa8.41□□□□□ -1.06
LINC01238-203ENST00000429456 PROK1P58294 105 aa8.41□□□□□ -1.06
LINC01238-203ENST00000429456 DEFB131AP59861 70 aa8.41□□□□□ -1.06
LINC01238-203ENST00000429456 TMEM263Q8WUH6 116 aaKnown RBP8.41□□□□□ -1.06
LINC01238-203ENST00000429456 PKD1L2Q7Z442 2459 aa8.4□□□□□ -1.06
LINC01238-203ENST00000429456 A0A0B4J2C4 111 aa8.4□□□□□ -1.06
LINC01238-203ENST00000429456 RBMY1BA6NDE4 496 aaKnown RBP8.4□□□□□ -1.06
LINC01238-203ENST00000429456 RBMY1EA6NEQ0 496 aaKnown RBP8.4□□□□□ -1.06
LINC01238-203ENST00000429456 H3BMM0 161 aa8.4□□□□□ -1.06
LINC01238-203ENST00000429456 RBMY1DP0C7P1 496 aaKnown RBP8.4□□□□□ -1.06
LINC01238-203ENST00000429456 CD28P10747 220 aa8.4□□□□□ -1.06
LINC01238-203ENST00000429456 MAPK1IP1LQ8NDC0 245 aa8.4□□□□□ -1.06
LINC01238-203ENST00000429456 PTH2Q96A98 100 aa8.4□□□□□ -1.06
LINC01238-203ENST00000429456 NACAE9PAV3 2078 aa8.4□□□□□ -1.06
LINC01238-203ENST00000429456 CACNA1AO00555 2505 aa8.39□□□□□ -1.07
LINC01238-203ENST00000429456 TRAV2A0A0B4J234 112 aa8.39□□□□□ -1.07
LINC01238-203ENST00000429456 IGHV3-33P01772 117 aa8.39□□□□□ -1.07
LINC01238-203ENST00000429456 HTN1P15515 57 aa8.39□□□□□ -1.07
LINC01238-203ENST00000429456 SLURP1P55000 103 aa8.39□□□□□ -1.07
LINC01238-203ENST00000429456 MRPS36P82909 103 aaKnown RBP8.39□□□□□ -1.07
LINC01238-203ENST00000429456 PIK3CD-AS1Q5SR53 167 aa8.39□□□□□ -1.07
LINC01238-203ENST00000429456 C18orf65Q6ZTR6 163 aa8.39□□□□□ -1.07
LINC01238-203ENST00000429456 TEN1Q86WV5 123 aa8.39□□□□□ -1.07
LINC01238-203ENST00000429456 MUSTN1Q8IVN3 82 aa8.39□□□□□ -1.07
LINC01238-203ENST00000429456 CARD19Q96LW7 228 aa8.39□□□□□ -1.07
LINC01238-203ENST00000429456 A0A0J9YXY3 114 aa8.39□□□□□ -1.07
LINC01238-203ENST00000429456 A8MWV9 139 aa8.39□□□□□ -1.07
LINC01238-203ENST00000429456 SCGB1C2P0DMR2 95 aa8.39□□□□□ -1.07
LINC01238-203ENST00000429456 IGHV3-30-3P0DP02 117 aa8.39□□□□□ -1.07
LINC01238-203ENST00000429456 DEFB136Q30KP8 78 aa8.38□□□□□ -1.07
LINC01238-203ENST00000429456 PPDPFLQ8WWR9 84 aa8.38□□□□□ -1.07
LINC01238-203ENST00000429456 DUX3Q96PT4 197 aa8.38□□□□□ -1.07
LINC01238-203ENST00000429456 CDIP1Q9H305 208 aa8.38□□□□□ -1.07
LINC01238-203ENST00000429456 BEX4Q9NWD9 120 aaPredicted RBP8.38□□□□□ -1.07
LINC01238-203ENST00000429456 TRAV25A0A0B4J276 109 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms