RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 GFRALQ6UXV0 394 aa6.62□□□□□ -1.35
CDC42BPA-206ENST00000429440 IL17DQ8TAD2 202 aa6.62□□□□□ -1.35
CDC42BPA-206ENST00000429440 VSIG2Q96IQ7 327 aa6.62□□□□□ -1.35
CDC42BPA-206ENST00000429440 RBMY1BA6NDE4 496 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-206ENST00000429440 RBMY1EA6NEQ0 496 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-206ENST00000429440 H7BZZ5 65 aa6.62□□□□□ -1.35
CDC42BPA-206ENST00000429440 RBMY1DP0C7P1 496 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-206ENST00000429440 RBMY1A1P0DJD3 496 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-206ENST00000429440 RBMY1CP0DJD4 496 aa6.62□□□□□ -1.35
CDC42BPA-206ENST00000429440 XCL1P47992 114 aa6.62□□□□□ -1.35
CDC42BPA-206ENST00000429440 RBMY1FQ15415 496 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-206ENST00000429440 MIAQ16674 131 aa6.62□□□□□ -1.35
CDC42BPA-206ENST00000429440 BEAN1Q3B7T3 259 aa6.62□□□□□ -1.35
CDC42BPA-206ENST00000429440 C1orf158Q8N1D5 194 aa6.62□□□□□ -1.35
CDC42BPA-206ENST00000429440 LINC00482Q8N8I6 264 aa6.62□□□□□ -1.35
CDC42BPA-206ENST00000429440 XCL2Q9UBD3 114 aa6.62□□□□□ -1.35
CDC42BPA-206ENST00000429440 IGKV3-15P01624 115 aa6.61□□□□□ -1.35
CDC42BPA-206ENST00000429440 PMAIP1Q13794 54 aa6.61□□□□□ -1.35
CDC42BPA-206ENST00000429440 C9orf106Q8NAJ2 232 aa6.61□□□□□ -1.35
CDC42BPA-206ENST00000429440 NUP37Q8NFH4 326 aa6.61□□□□□ -1.35
CDC42BPA-206ENST00000429440 C22orf24Q9Y442 160 aa6.61□□□□□ -1.35
CDC42BPA-206ENST00000429440 CADP27708 2225 aa6.61□□□□□ -1.35
CDC42BPA-206ENST00000429440 ABCA1O95477 2261 aa6.61□□□□□ -1.35
CDC42BPA-206ENST00000429440 DEFB124Q8NES8 71 aa6.61□□□□□ -1.35
CDC42BPA-206ENST00000429440 C11orf21Q9P2W6 132 aa6.61□□□□□ -1.35
CDC42BPA-206ENST00000429440 IGKV3D-7A0A0C4DH55 119 aa6.6□□□□□ -1.35
CDC42BPA-206ENST00000429440 BCE1O60756 84 aa6.6□□□□□ -1.35
CDC42BPA-206ENST00000429440 IGHV1-69P01742 117 aa6.6□□□□□ -1.35
CDC42BPA-206ENST00000429440 RPL39LQ96EH5 51 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-206ENST00000429440 DCHS1Q96JQ0 3298 aa6.6□□□□□ -1.35
CDC42BPA-206ENST00000429440 A0A087WVE0 104 aa6.6□□□□□ -1.35
CDC42BPA-206ENST00000429440 FANCD2OSQ96PS1 177 aa6.6□□□□□ -1.35
CDC42BPA-206ENST00000429440 M0R1W7 72 aa6.59□□□□□ -1.35
CDC42BPA-206ENST00000429440 GHRHP01286 108 aa6.59□□□□□ -1.35
CDC42BPA-206ENST00000429440 SEM1Q6ZVN7 128 aa6.59□□□□□ -1.35
CDC42BPA-206ENST00000429440 C20orf197Q8N268 126 aa6.59□□□□□ -1.35
CDC42BPA-206ENST00000429440 RNASE6Q93091 150 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-206ENST00000429440 ZNRD1Q9P1U0 126 aa6.59□□□□□ -1.35
CDC42BPA-206ENST00000429440 DMXL2Q8TDJ6 3036 aa6.59□□□□□ -1.35
CDC42BPA-206ENST00000429440 TIMM17BO60830 172 aa6.59□□□□□ -1.35
CDC42BPA-206ENST00000429440 DNAL4O96015 105 aa6.59□□□□□ -1.35
CDC42BPA-206ENST00000429440 IGLV1-44P01699 117 aa6.59□□□□□ -1.35
CDC42BPA-206ENST00000429440 GPHB5Q86YW7 130 aa6.59□□□□□ -1.35
CDC42BPA-206ENST00000429440 CNEP1R1Q8N9A8 125 aa6.59□□□□□ -1.35
CDC42BPA-206ENST00000429440 ANKRD11Q6UB99 2663 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-206ENST00000429440 IGHV4OR15-8A0A075B7B6 117 aa6.58□□□□□ -1.36
CDC42BPA-206ENST00000429440 A0A087WW49 117 aa6.58□□□□□ -1.36
CDC42BPA-206ENST00000429440 LHBP01229 141 aa6.58□□□□□ -1.36
CDC42BPA-206ENST00000429440 CD164Q04900 197 aa6.58□□□□□ -1.36
CDC42BPA-206ENST00000429440 MSMPQ1L6U9 139 aa6.58□□□□□ -1.36
CDC42BPA-206ENST00000429440 ADAMTSL4-AS1Q5T5F5 129 aa6.58□□□□□ -1.36
CDC42BPA-206ENST00000429440 LYPD5Q6UWN5 251 aa6.58□□□□□ -1.36
CDC42BPA-206ENST00000429440 ZFAND3Q9H8U3 227 aa6.58□□□□□ -1.36
CDC42BPA-206ENST00000429440 LAMTOR3Q9UHA4 124 aa6.58□□□□□ -1.36
CDC42BPA-206ENST00000429440 RIF1Q5UIP0 2472 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-206ENST00000429440 ATP5EP56381 51 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-206ENST00000429440 CFHR3Q02985 330 aa6.58□□□□□ -1.36
CDC42BPA-206ENST00000429440 KLKP1Q107X0 134 aa6.58□□□□□ -1.36
CDC42BPA-206ENST00000429440 Q6ZSV7 163 aa6.58□□□□□ -1.36
CDC42BPA-206ENST00000429440 ADGRG4Q8IZF6 3080 aa6.58□□□□□ -1.36
CDC42BPA-206ENST00000429440 IGHV1-18A0A0C4DH31 117 aa6.57□□□□□ -1.36
CDC42BPA-206ENST00000429440 TEX22C9J3V5 150 aa6.57□□□□□ -1.36
CDC42BPA-206ENST00000429440 ZNF561-AS1K7EIQ3 104 aa6.57□□□□□ -1.36
CDC42BPA-206ENST00000429440 POLR2KP53803 58 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-206ENST00000429440 PLCE1Q9P212 2302 aa6.57□□□□□ -1.36
CDC42BPA-206ENST00000429440 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-206ENST00000429440 K7EIM0 57 aa6.57□□□□□ -1.36
CDC42BPA-206ENST00000429440 VCYO14598 125 aa6.57□□□□□ -1.36
CDC42BPA-206ENST00000429440 CCKP06307 115 aa6.57□□□□□ -1.36
CDC42BPA-206ENST00000429440 ATP5EP2Q5VTU8 51 aa6.57□□□□□ -1.36
CDC42BPA-206ENST00000429440 LINC00846Q9NV44 126 aa6.57□□□□□ -1.36
CDC42BPA-206ENST00000429440 KALRNO60229 2985 aa6.57□□□□□ -1.36
CDC42BPA-206ENST00000429440 TRAV12-3A0A0B4J271 114 aa6.56□□□□□ -1.36
CDC42BPA-206ENST00000429440 IGHV3-30-3P0DP02 117 aa6.56□□□□□ -1.36
CDC42BPA-206ENST00000429440 Q6ZRU5 148 aa6.56□□□□□ -1.36
CDC42BPA-206ENST00000429440 RP1L1Q8IWN7 2480 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-206ENST00000429440 CEP250Q9BV73 2442 aa6.56□□□□□ -1.36
CDC42BPA-206ENST00000429440 ICE1Q9Y2F5 2266 aa6.56□□□□□ -1.36
CDC42BPA-206ENST00000429440 RPL39P62891 51 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-206ENST00000429440 S100A7L2Q5SY68 101 aa6.56□□□□□ -1.36
CDC42BPA-206ENST00000429440 DEFB109BQ30KR1 87 aa6.55□□□□□ -1.36
CDC42BPA-206ENST00000429440 PRR15Q8IV56 129 aa6.55□□□□□ -1.36
CDC42BPA-206ENST00000429440 OBSCN-AS1Q96MR7 158 aa6.55□□□□□ -1.36
CDC42BPA-206ENST00000429440 ZFHX2Q9C0A1 2572 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-206ENST00000429440 GVINP1Q7Z2Y8 2422 aa6.55□□□□□ -1.36
CDC42BPA-206ENST00000429440 TRAV7A0A075B6U4 112 aa6.55□□□□□ -1.36
CDC42BPA-206ENST00000429440 TRBV7-6A0A0J9YX20 115 aa6.55□□□□□ -1.36
CDC42BPA-206ENST00000429440 NDUFC1O43677 76 aa6.55□□□□□ -1.36
CDC42BPA-206ENST00000429440 MED14OSP0DP75 135 aa6.55□□□□□ -1.36
CDC42BPA-206ENST00000429440 LOXP28300 417 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-206ENST00000429440 SMAD5-AS1Q9Y6J3 95 aa6.55□□□□□ -1.36
CDC42BPA-206ENST00000429440 MAP1BP46821 2468 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-206ENST00000429440 TRBV10-3A0A0K0K1G6 114 aa6.54□□□□□ -1.36
CDC42BPA-206ENST00000429440 TMEM89A2RUT3 159 aa6.54□□□□□ -1.36
CDC42BPA-206ENST00000429440 APELAP0DMC3 54 aa6.54□□□□□ -1.36
CDC42BPA-206ENST00000429440 NDUFA12Q9UI09 145 aa6.54□□□□□ -1.36
CDC42BPA-206ENST00000429440 FAM215AQ9Y5M1 114 aa6.54□□□□□ -1.36
CDC42BPA-206ENST00000429440 RAI1Q7Z5J4 1906 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-206ENST00000429440 GAFA1Q96PS6 74 aa6.54□□□□□ -1.36
CDC42BPA-206ENST00000429440 RETNQ9HD89 108 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms