RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 OR11H4Q8NGC9 324 aa5.37□□□□□ -1.55
LSG1-202ENST00000427461 THAP6Q8TBB0 222 aa5.37□□□□□ -1.55
LSG1-202ENST00000427461 PHLDA3Q9Y5J5 127 aa5.37□□□□□ -1.55
LSG1-202ENST00000427461 IGKV3OR2-268A0A0C4DH90 116 aa5.36□□□□□ -1.55
LSG1-202ENST00000427461 IGSF23A1L1A6 192 aa5.36□□□□□ -1.55
LSG1-202ENST00000427461 GRIFINA4D1Z8 144 aa5.36□□□□□ -1.55
LSG1-202ENST00000427461 EIF5AP63241 154 aaKnown RBP5.36□□□□□ -1.55
LSG1-202ENST00000427461 SMUG1Q53HV7 270 aa5.36□□□□□ -1.55
LSG1-202ENST00000427461 C11orf1Q9H5F2 150 aa5.36□□□□□ -1.55
LSG1-202ENST00000427461 LYRM2Q9NU23 88 aaPredicted RBP5.36□□□□□ -1.55
LSG1-202ENST00000427461 MBD2Q9UBB5 411 aa5.36□□□□□ -1.55
LSG1-202ENST00000427461 S100A11P31949 105 aa5.35□□□□□ -1.55
LSG1-202ENST00000427461 SULT1A2P50226 295 aa5.35□□□□□ -1.55
LSG1-202ENST00000427461 IQCJQ1A5X6 159 aa5.35□□□□□ -1.55
LSG1-202ENST00000427461 RGS21Q2M5E4 152 aa5.35□□□□□ -1.55
LSG1-202ENST00000427461 FAM74A1Q5RGS3 127 aa5.35□□□□□ -1.55
LSG1-202ENST00000427461 CARD19Q96LW7 228 aa5.35□□□□□ -1.55
LSG1-202ENST00000427461 SLC25A21Q9BQT8 299 aaPredicted RBP5.35□□□□□ -1.55
LSG1-202ENST00000427461 MLST8Q9BVC4 326 aa5.35□□□□□ -1.55
LSG1-202ENST00000427461 PSG8Q9UQ74 426 aa5.35□□□□□ -1.55
LSG1-202ENST00000427461 IGLV7-46A0A075B6I9 117 aa5.34□□□□□ -1.55
LSG1-202ENST00000427461 A0A087WZ39 114 aa5.34□□□□□ -1.55
LSG1-202ENST00000427461 M0R036 132 aa5.34□□□□□ -1.55
LSG1-202ENST00000427461 S100A5P33763 92 aa5.34□□□□□ -1.55
LSG1-202ENST00000427461 SULT1A1P50225 295 aa5.34□□□□□ -1.55
LSG1-202ENST00000427461 LINC00310P59036 64 aa5.34□□□□□ -1.55
LSG1-202ENST00000427461 MT1HP80294 61 aa5.34□□□□□ -1.55
LSG1-202ENST00000427461 IFITM3Q01628 133 aa5.34□□□□□ -1.55
LSG1-202ENST00000427461 ZNF56Q15929 161 aa5.34□□□□□ -1.55
LSG1-202ENST00000427461 ZFP69Q49AA0 526 aa5.34□□□□□ -1.55
LSG1-202ENST00000427461 TMEM97Q5BJF2 176 aa5.34□□□□□ -1.55
LSG1-202ENST00000427461 PRNTQ86SH4 94 aa5.34□□□□□ -1.55
LSG1-202ENST00000427461 TMEM252Q8N6L7 170 aa5.34□□□□□ -1.55
LSG1-202ENST00000427461 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.34□□□□□ -1.55
LSG1-202ENST00000427461 AQP10Q96PS8 301 aa5.34□□□□□ -1.55
LSG1-202ENST00000427461 RPP21Q9H633 154 aaKnown RBP5.34□□□□□ -1.55
LSG1-202ENST00000427461 SSPOA2VEC9 5147 aa5.33□□□□□ -1.56
LSG1-202ENST00000427461 IGHV1-24A0A0C4DH33 117 aa5.33□□□□□ -1.56
LSG1-202ENST00000427461 A0A1B0GUV1 79 aa5.33□□□□□ -1.56
LSG1-202ENST00000427461 B4DEV8 164 aa5.33□□□□□ -1.56
LSG1-202ENST00000427461 PFDN1O60925 122 aa5.33□□□□□ -1.56
LSG1-202ENST00000427461 UPK1BO75841 260 aa5.33□□□□□ -1.56
LSG1-202ENST00000427461 BCL2P10415 239 aa5.33□□□□□ -1.56
LSG1-202ENST00000427461 FAUP35544 74 aaKnown RBP5.33□□□□□ -1.56
LSG1-202ENST00000427461 RAB4BP61018 213 aa5.33□□□□□ -1.56
LSG1-202ENST00000427461 SDHCQ99643 169 aaPredicted RBP5.33□□□□□ -1.56
LSG1-202ENST00000427461 FLVCR2Q9UPI3 526 aa5.33□□□□□ -1.56
LSG1-202ENST00000427461 CARHSP1Q9Y2V2 147 aaKnown RBP5.33□□□□□ -1.56
LSG1-202ENST00000427461 TCRAP04437 139 aa5.32□□□□□ -1.56
LSG1-202ENST00000427461 KRTAP10-6P60371 365 aaPredicted RBP5.32□□□□□ -1.56
LSG1-202ENST00000427461 FLI1Q01543 452 aaPredicted RBP5.32□□□□□ -1.56
LSG1-202ENST00000427461 KHDC3LQ587J8 217 aa5.32□□□□□ -1.56
LSG1-202ENST00000427461 OR5C1Q8NGR4 320 aa5.32□□□□□ -1.56
LSG1-202ENST00000427461 CHCHD10Q8WYQ3 142 aaPredicted RBP5.32□□□□□ -1.56
LSG1-202ENST00000427461 PKIGQ9Y2B9 76 aa5.32□□□□□ -1.56
LSG1-202ENST00000427461 A0A087X002 238 aa5.31□□□□□ -1.56
LSG1-202ENST00000427461 LOC107984640A0A0U1RRK4 108 aa5.31□□□□□ -1.56
LSG1-202ENST00000427461 FABP5P3A8MUU1 101 aa5.31□□□□□ -1.56
LSG1-202ENST00000427461 KRBOX1C9JBD0 128 aa5.31□□□□□ -1.56
LSG1-202ENST00000427461 TPT1P13693 172 aaKnown RBP5.31□□□□□ -1.56
LSG1-202ENST00000427461 HBG1P69891 147 aa5.31□□□□□ -1.56
LSG1-202ENST00000427461 HBG2P69892 147 aa5.31□□□□□ -1.56
LSG1-202ENST00000427461 SYCNQ0VAF6 134 aa5.31□□□□□ -1.56
LSG1-202ENST00000427461 ATP6V1FQ16864 119 aa5.31□□□□□ -1.56
LSG1-202ENST00000427461 ASB16-AS1Q495Z4 193 aa5.31□□□□□ -1.56
LSG1-202ENST00000427461 DNLZQ5SXM8 178 aa5.31□□□□□ -1.56
LSG1-202ENST00000427461 STX12Q86Y82 276 aa5.31□□□□□ -1.56
LSG1-202ENST00000427461 TOMM5Q8N4H5 51 aa5.31□□□□□ -1.56
LSG1-202ENST00000427461 CCDC32Q9BV29 185 aa5.31□□□□□ -1.56
LSG1-202ENST00000427461 USH2AO75445 5202 aa5.3□□□□□ -1.56
LSG1-202ENST00000427461 TMSB15BA0A087X1C1 80 aa5.3□□□□□ -1.56
LSG1-202ENST00000427461 CFC1BP0CG36 223 aa5.3□□□□□ -1.56
LSG1-202ENST00000427461 CRIP1P50238 77 aa5.3□□□□□ -1.56
LSG1-202ENST00000427461 NHLH2Q02577 135 aa5.3□□□□□ -1.56
LSG1-202ENST00000427461 FOXI1Q12951 378 aa5.3□□□□□ -1.56
LSG1-202ENST00000427461 ZNF674Q2M3X9 581 aa5.3□□□□□ -1.56
LSG1-202ENST00000427461 KRTAP19-2Q3LHN2 52 aa5.3□□□□□ -1.56
LSG1-202ENST00000427461 ZFP82Q8N141 532 aa5.3□□□□□ -1.56
LSG1-202ENST00000427461 SVIPQ8NHG7 77 aa5.3□□□□□ -1.56
LSG1-202ENST00000427461 TMEM243Q9BU79 118 aa5.3□□□□□ -1.56
LSG1-202ENST00000427461 TRAV6A0A075B6T7 132 aa5.29□□□□□ -1.56
LSG1-202ENST00000427461 FAM25EA8MYX2 175 aa5.29□□□□□ -1.56
LSG1-202ENST00000427461 F5H697 171 aa5.29□□□□□ -1.56
LSG1-202ENST00000427461 HMGB3O15347 200 aaKnown RBP5.29□□□□□ -1.56
LSG1-202ENST00000427461 TAS2R45P59539 299 aa5.29□□□□□ -1.56
LSG1-202ENST00000427461 DEFA1P59665 94 aa5.29□□□□□ -1.56
LSG1-202ENST00000427461 DEFA3P59666 94 aa5.29□□□□□ -1.56
LSG1-202ENST00000427461 FAM162BQ5T6X4 162 aa5.29□□□□□ -1.56
LSG1-202ENST00000427461 TYMSOSQ8TAI1 123 aa5.29□□□□□ -1.56
LSG1-202ENST00000427461 WDR61Q9GZS3 305 aaKnown RBP5.29□□□□□ -1.56
LSG1-202ENST00000427461 PPDPFQ9H3Y8 114 aa5.29□□□□□ -1.56
LSG1-202ENST00000427461 V9GYH0 126 aa5.29□□□□□ -1.56
LSG1-202ENST00000427461 TRAV34A0A0B4J273 112 aa5.28□□□□□ -1.56
LSG1-202ENST00000427461 SERTM2A0A1B0GWG4 89 aa5.28□□□□□ -1.56
LSG1-202ENST00000427461 FAM168BA1KXE4 195 aa5.28□□□□□ -1.56
LSG1-202ENST00000427461 FGF6P10767 208 aa5.28□□□□□ -1.56
LSG1-202ENST00000427461 SAPCD1Q5SSQ6 148 aa5.28□□□□□ -1.56
LSG1-202ENST00000427461 LINC00173Q6ZV60 143 aa5.28□□□□□ -1.56
LSG1-202ENST00000427461 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.27□□□□□ -1.57
LSG1-202ENST00000427461 K7EQM0 130 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms