RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 A0A1B0GXF2 115 aa10.84□□□□□ -0.67
COL11A1-204ENST00000427239 NUPR2A6NF83 97 aa10.84□□□□□ -0.67
COL11A1-204ENST00000427239 GATA1P15976 413 aaPredicted RBP10.84□□□□□ -0.67
COL11A1-204ENST00000427239 CAMPP49913 170 aa10.84□□□□□ -0.67
COL11A1-204ENST00000427239 PDZD11Q5EBL8 140 aa10.84□□□□□ -0.67
COL11A1-204ENST00000427239 CEMP1Q6PRD7 247 aaPredicted RBP10.84□□□□□ -0.67
COL11A1-204ENST00000427239 RASL11AQ6T310 242 aa10.84□□□□□ -0.67
COL11A1-204ENST00000427239 HIST1H2BLQ99880 126 aa10.84□□□□□ -0.67
COL11A1-204ENST00000427239 PRO1933Q9H354 126 aa10.84□□□□□ -0.67
COL11A1-204ENST00000427239 H3BNG1 76 aa10.83□□□□□ -0.68
COL11A1-204ENST00000427239 LINC00315P59091 139 aa10.83□□□□□ -0.68
COL11A1-204ENST00000427239 F5H697 171 aa10.82□□□□□ -0.68
COL11A1-204ENST00000427239 CRYBA4P53673 196 aa10.82□□□□□ -0.68
COL11A1-204ENST00000427239 SLC25A29Q8N8R3 303 aa10.82□□□□□ -0.68
COL11A1-204ENST00000427239 KLK5Q9Y337 293 aaPredicted RBP10.82□□□□□ -0.68
COL11A1-204ENST00000427239 CSMD3Q7Z407 3707 aa10.82□□□□□ -0.68
COL11A1-204ENST00000427239 TRAV26-1A0A087WT03 109 aa10.81□□□□□ -0.68
COL11A1-204ENST00000427239 TCAPO15273 167 aa10.81□□□□□ -0.68
COL11A1-204ENST00000427239 PAX4O43316 350 aa10.81□□□□□ -0.68
COL11A1-204ENST00000427239 ZNF56Q15929 161 aa10.81□□□□□ -0.68
COL11A1-204ENST00000427239 PHOX2AO14813 284 aa10.81□□□□□ -0.68
COL11A1-204ENST00000427239 COA6Q5JTJ3 125 aaKnown RBP10.81□□□□□ -0.68
COL11A1-204ENST00000427239 Q6ZSN1 163 aa10.81□□□□□ -0.68
COL11A1-204ENST00000427239 GATD1Q8NB37 220 aa10.81□□□□□ -0.68
COL11A1-204ENST00000427239 PRADC1Q9BSG0 188 aa10.81□□□□□ -0.68
COL11A1-204ENST00000427239 C3orf84H3BNL1 204 aa10.8□□□□□ -0.68
COL11A1-204ENST00000427239 MGPP08493 103 aa10.8□□□□□ -0.68
COL11A1-204ENST00000427239 RHOHQ15669 191 aa10.8□□□□□ -0.68
COL11A1-204ENST00000427239 COX19Q49B96 90 aa10.8□□□□□ -0.68
COL11A1-204ENST00000427239 IGLL5B9A064 214 aa10.79□□□□□ -0.68
COL11A1-204ENST00000427239 H7C1H1 209 aa10.79□□□□□ -0.68
COL11A1-204ENST00000427239 RAB4AP20338 218 aa10.79□□□□□ -0.68
COL11A1-204ENST00000427239 FAM104BQ5XKR9 115 aa10.79□□□□□ -0.68
COL11A1-204ENST00000427239 VSIG2Q96IQ7 327 aa10.79□□□□□ -0.68
COL11A1-204ENST00000427239 NACAE9PAV3 2078 aa10.79□□□□□ -0.68
COL11A1-204ENST00000427239 A0A0J9YY99 117 aa10.78□□□□□ -0.68
COL11A1-204ENST00000427239 TRBV10-1A0A0K0K1A3 114 aa10.78□□□□□ -0.68
COL11A1-204ENST00000427239 K7EQD1 137 aa10.78□□□□□ -0.68
COL11A1-204ENST00000427239 TCTAP57738 103 aa10.78□□□□□ -0.68
COL11A1-204ENST00000427239 C15orf53Q8NAA6 179 aa10.78□□□□□ -0.68
COL11A1-204ENST00000427239 AMN1Q8IY45 258 aa10.78□□□□□ -0.68
COL11A1-204ENST00000427239 GNB1LQ9BYB4 327 aa10.78□□□□□ -0.68
COL11A1-204ENST00000427239 M0QY20 66 aa10.77□□□□□ -0.69
COL11A1-204ENST00000427239 SUMO4Q6EEV6 95 aa10.77□□□□□ -0.69
COL11A1-204ENST00000427239 ZNF664Q8N3J9 261 aa10.77□□□□□ -0.69
COL11A1-204ENST00000427239 MRAP2Q96G30 205 aa10.77□□□□□ -0.69
COL11A1-204ENST00000427239 RNF185Q96GF1 192 aa10.77□□□□□ -0.69
COL11A1-204ENST00000427239 TENM2Q9NT68 2774 aa10.77□□□□□ -0.69
COL11A1-204ENST00000427239 GYPEP15421 78 aa10.76□□□□□ -0.69
COL11A1-204ENST00000427239 MRPL23Q16540 153 aaKnown RBP10.76□□□□□ -0.69
COL11A1-204ENST00000427239 ZFAND6Q6FIF0 208 aa10.76□□□□□ -0.69
COL11A1-204ENST00000427239 IQCJQ1A5X6 159 aa10.75□□□□□ -0.69
COL11A1-204ENST00000427239 TMEM136Q6ZRR5 245 aa10.75□□□□□ -0.69
COL11A1-204ENST00000427239 SH2D6Q7Z4S9 175 aa10.75□□□□□ -0.69
COL11A1-204ENST00000427239 MRPL52Q86TS9 123 aaKnown RBP10.75□□□□□ -0.69
COL11A1-204ENST00000427239 TMEM18Q96B42 140 aa10.75□□□□□ -0.69
COL11A1-204ENST00000427239 ICOSQ9Y6W8 199 aa10.75□□□□□ -0.69
COL11A1-204ENST00000427239 PPP1R17O96001 155 aa10.75□□□□□ -0.69
COL11A1-204ENST00000427239 HLA-DQA1P01909 254 aa10.75□□□□□ -0.69
COL11A1-204ENST00000427239 PPBPP02775 128 aa10.75□□□□□ -0.69
COL11A1-204ENST00000427239 MT-ND6P03923 174 aa10.75□□□□□ -0.69
COL11A1-204ENST00000427239 RPL36AP83881 106 aaKnown RBP10.75□□□□□ -0.69
COL11A1-204ENST00000427239 MRPL51Q4U2R6 128 aaKnown RBP10.75□□□□□ -0.69
COL11A1-204ENST00000427239 CASC10Q5T4H9 136 aa10.75□□□□□ -0.69
COL11A1-204ENST00000427239 RPL36ALQ969Q0 106 aaKnown RBP10.75□□□□□ -0.69
COL11A1-204ENST00000427239 DNAJC30Q96LL9 226 aa10.75□□□□□ -0.69
COL11A1-204ENST00000427239 TRBV7-3A0A075B6L6 115 aa10.74□□□□□ -0.69
COL11A1-204ENST00000427239 TRAV26-2A0A0B4J265 109 aa10.74□□□□□ -0.69
COL11A1-204ENST00000427239 NUDT3O95989 172 aa10.74□□□□□ -0.69
COL11A1-204ENST00000427239 P0DMU3 169 aa10.73□□□□□ -0.69
COL11A1-204ENST00000427239 FAM231AP0DMU4 169 aa10.73□□□□□ -0.69
COL11A1-204ENST00000427239 FAM231CP0DMU5 169 aa10.73□□□□□ -0.69
COL11A1-204ENST00000427239 CKS2P33552 79 aa10.73□□□□□ -0.69
COL11A1-204ENST00000427239 Q9UF83 564 aa10.73□□□□□ -0.69
COL11A1-204ENST00000427239 TNFRSF18Q9Y5U5 241 aa10.73□□□□□ -0.69
COL11A1-204ENST00000427239 A0A096LPF7 62 aa10.72□□□□□ -0.69
COL11A1-204ENST00000427239 LOC100131303A0A0U1RQF7 123 aa10.72□□□□□ -0.69
COL11A1-204ENST00000427239 M0R143 59 aa10.72□□□□□ -0.69
COL11A1-204ENST00000427239 SRIP30626 198 aa10.72□□□□□ -0.69
COL11A1-204ENST00000427239 NEGR1Q7Z3B1 354 aa10.72□□□□□ -0.69
COL11A1-204ENST00000427239 NEXN-AS1Q8NBZ9 246 aa10.72□□□□□ -0.69
COL11A1-204ENST00000427239 ZNRF2Q8NHG8 242 aa10.72□□□□□ -0.69
COL11A1-204ENST00000427239 APLNQ9ULZ1 77 aa10.72□□□□□ -0.69
COL11A1-204ENST00000427239 DYNC2H1Q8NCM8 4307 aaKnown RBP10.72□□□□□ -0.69
COL11A1-204ENST00000427239 EREGO14944 169 aa10.72□□□□□ -0.69
COL11A1-204ENST00000427239 APCSP02743 223 aa10.72□□□□□ -0.69
COL11A1-204ENST00000427239 STARD9Q9P2P6 4700 aa10.71□□□□□ -0.69
COL11A1-204ENST00000427239 GAGE12JA6NER3 117 aa10.71□□□□□ -0.69
COL11A1-204ENST00000427239 GAGE1Q13065 139 aa10.71□□□□□ -0.69
COL11A1-204ENST00000427239 GAGE4Q13068 117 aa10.71□□□□□ -0.69
COL11A1-204ENST00000427239 GAGE5Q13069 117 aa10.71□□□□□ -0.69
COL11A1-204ENST00000427239 GAGE13Q4V321 117 aa10.71□□□□□ -0.69
COL11A1-204ENST00000427239 ORMDL3Q8N138 153 aa10.71□□□□□ -0.69
COL11A1-204ENST00000427239 TRBV6-5A0A0K0K1A5 114 aa10.7□□□□□ -0.7
COL11A1-204ENST00000427239 D6R8Y8 96 aa10.7□□□□□ -0.7
COL11A1-204ENST00000427239 TRAPPC1Q9Y5R8 145 aa10.7□□□□□ -0.7
COL11A1-204ENST00000427239 LINC00694P0DN24 101 aa10.7□□□□□ -0.7
COL11A1-204ENST00000427239 UBE2D3P61077 147 aa10.7□□□□□ -0.7
COL11A1-204ENST00000427239 UBE2D2P62837 147 aa10.7□□□□□ -0.7
COL11A1-204ENST00000427239 OR10J3Q5JRS4 329 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms