RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 NOTCH1P46531 2555 aa10.79□□□□□ -0.68
GINS3-203ENST00000426538 K7EIL1 84 aa10.78□□□□□ -0.68
GINS3-203ENST00000426538 DEFB4AO15263 64 aa10.78□□□□□ -0.68
GINS3-203ENST00000426538 Q8NAQ8 132 aa10.78□□□□□ -0.68
GINS3-203ENST00000426538 EDA2RQ9HAV5 297 aa10.78□□□□□ -0.68
GINS3-203ENST00000426538 FAM222AQ5U5X8 452 aa10.78□□□□□ -0.68
GINS3-203ENST00000426538 PACRGQ96M98 296 aaPredicted RBP10.78□□□□□ -0.68
GINS3-203ENST00000426538 MGAM2Q2M2H8 2515 aa10.78□□□□□ -0.68
GINS3-203ENST00000426538 Q6ZSN1 163 aa10.77□□□□□ -0.69
GINS3-203ENST00000426538 SMIM2Q9BVW6 85 aa10.77□□□□□ -0.69
GINS3-203ENST00000426538 NACAE9PAV3 2078 aa10.77□□□□□ -0.69
GINS3-203ENST00000426538 TRBV6-5A0A0K0K1A5 114 aa10.76□□□□□ -0.69
GINS3-203ENST00000426538 SDHAF1A6NFY7 115 aa10.76□□□□□ -0.69
GINS3-203ENST00000426538 PMCHL1Q16048 86 aa10.76□□□□□ -0.69
GINS3-203ENST00000426538 OR10D4PQ8NGN7 298 aa10.76□□□□□ -0.69
GINS3-203ENST00000426538 DKK2Q9UBU2 259 aa10.76□□□□□ -0.69
GINS3-203ENST00000426538 TNFRSF18Q9Y5U5 241 aa10.76□□□□□ -0.69
GINS3-203ENST00000426538 NBEAL1Q6ZS30 2694 aa10.76□□□□□ -0.69
GINS3-203ENST00000426538 IGLV2-18A0A075B6J9 118 aa10.75□□□□□ -0.69
GINS3-203ENST00000426538 TRGV4A0A0C4DH28 118 aa10.75□□□□□ -0.69
GINS3-203ENST00000426538 VCYO14598 125 aa10.75□□□□□ -0.69
GINS3-203ENST00000426538 SBSPONQ8IVN8 264 aa10.75□□□□□ -0.69
GINS3-203ENST00000426538 LINC00612Q8N6U2 182 aa10.75□□□□□ -0.69
GINS3-203ENST00000426538 C18orf15Q96N68 181 aa10.75□□□□□ -0.69
GINS3-203ENST00000426538 TMEM70Q9BUB7 260 aa10.75□□□□□ -0.69
GINS3-203ENST00000426538 IGHV1-24A0A0C4DH33 117 aa10.75□□□□□ -0.69
GINS3-203ENST00000426538 SPART-AS1P0CW21 52 aa10.75□□□□□ -0.69
GINS3-203ENST00000426538 P0DMU3 169 aa10.75□□□□□ -0.69
GINS3-203ENST00000426538 FAM231AP0DMU4 169 aa10.75□□□□□ -0.69
GINS3-203ENST00000426538 FAM231CP0DMU5 169 aa10.75□□□□□ -0.69
GINS3-203ENST00000426538 POLR2KP53803 58 aaKnown RBP10.75□□□□□ -0.69
GINS3-203ENST00000426538 RPL32P62910 135 aaKnown RBP10.75□□□□□ -0.69
GINS3-203ENST00000426538 LAGE3Q14657 143 aa10.75□□□□□ -0.69
GINS3-203ENST00000426538 RETNQ9HD89 108 aa10.75□□□□□ -0.69
GINS3-203ENST00000426538 LINC01546A6NGU7 62 aa10.74□□□□□ -0.69
GINS3-203ENST00000426538 K7EMI3 77 aa10.74□□□□□ -0.69
GINS3-203ENST00000426538 TCAPO15273 167 aa10.74□□□□□ -0.69
GINS3-203ENST00000426538 DAD1P61803 113 aa10.74□□□□□ -0.69
GINS3-203ENST00000426538 MRAPQ8TCY5 172 aa10.74□□□□□ -0.69
GINS3-203ENST00000426538 DNAJC30Q96LL9 226 aa10.74□□□□□ -0.69
GINS3-203ENST00000426538 KIR2DL4Q99706 377 aa10.74□□□□□ -0.69
GINS3-203ENST00000426538 K7EQD1 137 aa10.73□□□□□ -0.69
GINS3-203ENST00000426538 LEPROTL1O95214 131 aa10.73□□□□□ -0.69
GINS3-203ENST00000426538 TRBV27A0A0K0K1C4 114 aa10.72□□□□□ -0.69
GINS3-203ENST00000426538 TEX48A0A1B0GUV7 120 aa10.72□□□□□ -0.69
GINS3-203ENST00000426538 ORMDL2Q53FV1 153 aa10.72□□□□□ -0.69
GINS3-203ENST00000426538 SLC25A29Q8N8R3 303 aa10.72□□□□□ -0.69
GINS3-203ENST00000426538 NEXN-AS1Q8NBZ9 246 aa10.72□□□□□ -0.69
GINS3-203ENST00000426538 SPATA25Q9BR10 227 aa10.72□□□□□ -0.69
GINS3-203ENST00000426538 TRBV10-1A0A0K0K1A3 114 aa10.72□□□□□ -0.69
GINS3-203ENST00000426538 TRBV6-4A0A1B0GX49 114 aa10.72□□□□□ -0.69
GINS3-203ENST00000426538 I3L3M4 83 aa10.72□□□□□ -0.69
GINS3-203ENST00000426538 HBDP02042 147 aa10.72□□□□□ -0.69
GINS3-203ENST00000426538 FCER1GP30273 86 aa10.72□□□□□ -0.69
GINS3-203ENST00000426538 FHL2Q14192 279 aa10.72□□□□□ -0.69
GINS3-203ENST00000426538 NEGR1Q7Z3B1 354 aa10.72□□□□□ -0.69
GINS3-203ENST00000426538 NUDT3O95989 172 aa10.71□□□□□ -0.69
GINS3-203ENST00000426538 RPL36AP83881 106 aaKnown RBP10.71□□□□□ -0.69
GINS3-203ENST00000426538 RPL36ALQ969Q0 106 aaKnown RBP10.71□□□□□ -0.69
GINS3-203ENST00000426538 CELA1Q9UNI1 258 aa10.71□□□□□ -0.69
GINS3-203ENST00000426538 TRBV7-3A0A075B6L6 115 aa10.7□□□□□ -0.7
GINS3-203ENST00000426538 BTF3P20290 206 aaKnown RBP10.7□□□□□ -0.7
GINS3-203ENST00000426538 ZNRF2Q8NHG8 242 aa10.7□□□□□ -0.7
GINS3-203ENST00000426538 PRADC1Q9BSG0 188 aa10.7□□□□□ -0.7
GINS3-203ENST00000426538 Q9UF83 564 aa10.7□□□□□ -0.7
GINS3-203ENST00000426538 HSPB8Q9UJY1 196 aa10.7□□□□□ -0.7
GINS3-203ENST00000426538 HHLA3Q9XRX5 114 aa10.7□□□□□ -0.7
GINS3-203ENST00000426538 G0S2P27469 103 aa10.7□□□□□ -0.7
GINS3-203ENST00000426538 RHOHQ15669 191 aa10.7□□□□□ -0.7
GINS3-203ENST00000426538 ATP5G1P05496 136 aa10.69□□□□□ -0.7
GINS3-203ENST00000426538 TM2D3Q9BRN9 247 aa10.69□□□□□ -0.7
GINS3-203ENST00000426538 C11orf68Q9H3H3 251 aaKnown RBP10.69□□□□□ -0.7
GINS3-203ENST00000426538 A0A096LNJ9 63 aa10.68□□□□□ -0.7
GINS3-203ENST00000426538 KRTDAPP60985 99 aa10.68□□□□□ -0.7
GINS3-203ENST00000426538 DEFB104AQ8WTQ1 72 aa10.68□□□□□ -0.7
GINS3-203ENST00000426538 ZMAT4Q9H898 229 aa10.68□□□□□ -0.7
GINS3-203ENST00000426538 PRO0255Q9UI72 69 aa10.67□□□□□ -0.7
GINS3-203ENST00000426538 GAGE12JA6NER3 117 aa10.67□□□□□ -0.7
GINS3-203ENST00000426538 GAGE1Q13065 139 aa10.67□□□□□ -0.7
GINS3-203ENST00000426538 GAGE4Q13068 117 aa10.67□□□□□ -0.7
GINS3-203ENST00000426538 GAGE5Q13069 117 aa10.67□□□□□ -0.7
GINS3-203ENST00000426538 GAGE13Q4V321 117 aa10.67□□□□□ -0.7
GINS3-203ENST00000426538 PHLDA1Q8WV24 401 aaPredicted RBP10.67□□□□□ -0.7
GINS3-203ENST00000426538 MAP1LC3CQ9BXW4 147 aa10.67□□□□□ -0.7
GINS3-203ENST00000426538 A0A0J9YWU9 116 aa10.66□□□□□ -0.7
GINS3-203ENST00000426538 IGHV3-38A0A0C4DH36 116 aa10.65□□□□□ -0.7
GINS3-203ENST00000426538 SCGB1D1O95968 90 aa10.65□□□□□ -0.7
GINS3-203ENST00000426538 TSHBP01222 138 aa10.65□□□□□ -0.7
GINS3-203ENST00000426538 C3orf79P0CE67 100 aa10.65□□□□□ -0.7
GINS3-203ENST00000426538 CRYBA4P53673 196 aa10.65□□□□□ -0.7
GINS3-203ENST00000426538 COTL1Q14019 142 aa10.65□□□□□ -0.7
GINS3-203ENST00000426538 DAZ4Q86SG3 579 aaKnown RBP10.65□□□□□ -0.7
GINS3-203ENST00000426538 DAZ3Q9NR90 486 aaKnown RBP10.65□□□□□ -0.7
GINS3-203ENST00000426538 LINC01549A6NIU2 74 aa10.64□□□□□ -0.71
GINS3-203ENST00000426538 F5H768 121 aa10.64□□□□□ -0.71
GINS3-203ENST00000426538 PAX4O43316 350 aa10.64□□□□□ -0.71
GINS3-203ENST00000426538 UBE2D3P61077 147 aa10.64□□□□□ -0.71
GINS3-203ENST00000426538 UBE2D2P62837 147 aa10.64□□□□□ -0.71
GINS3-203ENST00000426538 JOSD1Q15040 202 aaPredicted RBP10.64□□□□□ -0.71
GINS3-203ENST00000426538 C12orf74Q32Q52 190 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms