RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 ZNF479Q96JC4 524 aa7.34□□□□□ -1.23
MDC1-205ENST00000425072 HIST1H2BNQ99877 126 aa7.34□□□□□ -1.23
MDC1-205ENST00000425072 HIST1H2BMQ99879 126 aa7.34□□□□□ -1.23
MDC1-205ENST00000425072 MAP1LC3AQ9H492 121 aa7.34□□□□□ -1.23
MDC1-205ENST00000425072 ST20Q9HBF5 79 aa7.34□□□□□ -1.23
MDC1-205ENST00000425072 HHLA3Q9XRX5 114 aa7.34□□□□□ -1.23
MDC1-205ENST00000425072 TNFRSF18Q9Y5U5 241 aa7.34□□□□□ -1.23
MDC1-205ENST00000425072 BIRC6Q9NR09 4857 aa7.33□□□□□ -1.24
MDC1-205ENST00000425072 A0A0J9YWU9 116 aa7.33□□□□□ -1.24
MDC1-205ENST00000425072 TRBV6-5A0A0K0K1A5 114 aa7.33□□□□□ -1.24
MDC1-205ENST00000425072 VCYO14598 125 aa7.33□□□□□ -1.24
MDC1-205ENST00000425072 GHRHP01286 108 aa7.33□□□□□ -1.24
MDC1-205ENST00000425072 NDUFA6P56556 154 aa7.33□□□□□ -1.24
MDC1-205ENST00000425072 FHL2Q14192 279 aa7.33□□□□□ -1.24
MDC1-205ENST00000425072 C11orf45Q8TAV5 145 aa7.33□□□□□ -1.24
MDC1-205ENST00000425072 PRADC1Q9BSG0 188 aa7.33□□□□□ -1.24
MDC1-205ENST00000425072 PRO0255Q9UI72 69 aa7.33□□□□□ -1.24
MDC1-205ENST00000425072 TRAV26-2A0A0B4J265 109 aa7.32□□□□□ -1.24
MDC1-205ENST00000425072 SMKR1H3BMG3 65 aa7.32□□□□□ -1.24
MDC1-205ENST00000425072 TCAPO15273 167 aa7.32□□□□□ -1.24
MDC1-205ENST00000425072 LINC00614P0C842 121 aa7.32□□□□□ -1.24
MDC1-205ENST00000425072 GATA1P15976 413 aaPredicted RBP7.32□□□□□ -1.24
MDC1-205ENST00000425072 G0S2P27469 103 aa7.32□□□□□ -1.24
MDC1-205ENST00000425072 RPL32P62910 135 aaKnown RBP7.32□□□□□ -1.24
MDC1-205ENST00000425072 RPL36AP83881 106 aaKnown RBP7.32□□□□□ -1.24
MDC1-205ENST00000425072 NIT1Q86X76 327 aa7.32□□□□□ -1.24
MDC1-205ENST00000425072 NRACQ8N912 160 aa7.32□□□□□ -1.24
MDC1-205ENST00000425072 C18orf32Q8TCD1 76 aa7.32□□□□□ -1.24
MDC1-205ENST00000425072 RPL36ALQ969Q0 106 aaKnown RBP7.32□□□□□ -1.24
MDC1-205ENST00000425072 NXT2Q9NPJ8 142 aaKnown RBP7.32□□□□□ -1.24
MDC1-205ENST00000425072 LOC389332A0A1B0GUA5 103 aa7.31□□□□□ -1.24
MDC1-205ENST00000425072 K7EMI3 77 aa7.31□□□□□ -1.24
MDC1-205ENST00000425072 NCR2O95944 276 aa7.31□□□□□ -1.24
MDC1-205ENST00000425072 NPYP01303 97 aa7.31□□□□□ -1.24
MDC1-205ENST00000425072 PMCHP20382 165 aa7.31□□□□□ -1.24
MDC1-205ENST00000425072 SUMO2P61956 95 aaKnown RBP7.31□□□□□ -1.24
MDC1-205ENST00000425072 RHOHQ15669 191 aa7.31□□□□□ -1.24
MDC1-205ENST00000425072 C12orf74Q32Q52 190 aa7.31□□□□□ -1.24
MDC1-205ENST00000425072 COA6Q5JTJ3 125 aaKnown RBP7.31□□□□□ -1.24
MDC1-205ENST00000425072 SLC25A29Q8N8R3 303 aa7.31□□□□□ -1.24
MDC1-205ENST00000425072 TRBV7-3A0A075B6L6 115 aa7.3□□□□□ -1.24
MDC1-205ENST00000425072 F5H768 121 aa7.3□□□□□ -1.24
MDC1-205ENST00000425072 K7EQD1 137 aa7.3□□□□□ -1.24
MDC1-205ENST00000425072 PAX4O43316 350 aa7.3□□□□□ -1.24
MDC1-205ENST00000425072 POLR2KP53803 58 aaKnown RBP7.3□□□□□ -1.24
MDC1-205ENST00000425072 Q6ZSN1 163 aa7.3□□□□□ -1.24
MDC1-205ENST00000425072 FA2HQ7L5A8 372 aa7.3□□□□□ -1.24
MDC1-205ENST00000425072 Q8N8P6 123 aa7.3□□□□□ -1.24
MDC1-205ENST00000425072 CHCHD1Q96BP2 118 aaKnown RBP7.3□□□□□ -1.24
MDC1-205ENST00000425072 KIR2DL4Q99706 377 aa7.3□□□□□ -1.24
MDC1-205ENST00000425072 CELA1Q9UNI1 258 aa7.3□□□□□ -1.24
MDC1-205ENST00000425072 TMA7Q9Y2S6 64 aaKnown RBP7.3□□□□□ -1.24
MDC1-205ENST00000425072 DNAH3Q8TD57 4116 aa7.29□□□□□ -1.24
MDC1-205ENST00000425072 SDHAF1A6NFY7 115 aa7.29□□□□□ -1.24
MDC1-205ENST00000425072 I3L3M4 83 aa7.29□□□□□ -1.24
MDC1-205ENST00000425072 GAS8-AS1O95177 125 aa7.29□□□□□ -1.24
MDC1-205ENST00000425072 IFI27P40305 119 aaPredicted RBP7.29□□□□□ -1.24
MDC1-205ENST00000425072 CRYBA4P53673 196 aa7.29□□□□□ -1.24
MDC1-205ENST00000425072 SH2D6Q7Z4S9 175 aa7.29□□□□□ -1.24
MDC1-205ENST00000425072 DAZ4Q86SG3 579 aaKnown RBP7.29□□□□□ -1.24
MDC1-205ENST00000425072 ZNRF2Q8NHG8 242 aa7.29□□□□□ -1.24
MDC1-205ENST00000425072 RPL39LQ96EH5 51 aaKnown RBP7.29□□□□□ -1.24
MDC1-205ENST00000425072 DAZ3Q9NR90 486 aaKnown RBP7.29□□□□□ -1.24
MDC1-205ENST00000425072 TRBV27A0A0K0K1C4 114 aa7.28□□□□□ -1.24
MDC1-205ENST00000425072 H3BNG1 76 aa7.28□□□□□ -1.24
MDC1-205ENST00000425072 HSBP1O75506 76 aa7.28□□□□□ -1.24
MDC1-205ENST00000425072 HTN3P15516 51 aa7.28□□□□□ -1.24
MDC1-205ENST00000425072 TMEM97Q5BJF2 176 aa7.28□□□□□ -1.24
MDC1-205ENST00000425072 NEXN-AS1Q8NBZ9 246 aa7.28□□□□□ -1.24
MDC1-205ENST00000425072 TMEM70Q9BUB7 260 aa7.28□□□□□ -1.24
MDC1-205ENST00000425072 SMIM2Q9BVW6 85 aa7.28□□□□□ -1.24
MDC1-205ENST00000425072 AP5S1Q9NUS5 200 aa7.28□□□□□ -1.24
MDC1-205ENST00000425072 DEFB131BA0A096LNP1 70 aa7.27□□□□□ -1.25
MDC1-205ENST00000425072 TRAV10A0A0B4J240 114 aa7.27□□□□□ -1.25
MDC1-205ENST00000425072 LINC01549A6NIU2 74 aa7.27□□□□□ -1.25
MDC1-205ENST00000425072 ESDP10768 282 aa7.27□□□□□ -1.25
MDC1-205ENST00000425072 HOXA5P20719 270 aa7.27□□□□□ -1.25
MDC1-205ENST00000425072 S100A2P29034 98 aa7.27□□□□□ -1.25
MDC1-205ENST00000425072 NANOS2P60321 138 aaKnown RBP7.27□□□□□ -1.25
MDC1-205ENST00000425072 SNRPEP62304 92 aaKnown RBP7.27□□□□□ -1.25
MDC1-205ENST00000425072 LAGE3Q14657 143 aa7.27□□□□□ -1.25
MDC1-205ENST00000425072 MRPL23Q16540 153 aaKnown RBP7.27□□□□□ -1.25
MDC1-205ENST00000425072 IQCJQ1A5X6 159 aa7.27□□□□□ -1.25
MDC1-205ENST00000425072 ORMDL2Q53FV1 153 aa7.27□□□□□ -1.25
MDC1-205ENST00000425072 LINC01546A6NGU7 62 aa7.26□□□□□ -1.25
MDC1-205ENST00000425072 C5orf52A6NGY3 159 aa7.26□□□□□ -1.25
MDC1-205ENST00000425072 SERF1AO75920 110 aa7.26□□□□□ -1.25
MDC1-205ENST00000425072 P0DMU3 169 aa7.26□□□□□ -1.25
MDC1-205ENST00000425072 FAM231AP0DMU4 169 aa7.26□□□□□ -1.25
MDC1-205ENST00000425072 FAM231CP0DMU5 169 aa7.26□□□□□ -1.25
MDC1-205ENST00000425072 FCER1GP30273 86 aa7.26□□□□□ -1.25
MDC1-205ENST00000425072 RNASEKQ6P5S7 137 aaKnown RBP7.26□□□□□ -1.25
MDC1-205ENST00000425072 Q6ZTC4 211 aa7.26□□□□□ -1.25
MDC1-205ENST00000425072 EPPK1P58107 5090 aaKnown RBP7.25□□□□□ -1.25
MDC1-205ENST00000425072 IGLV2-18A0A075B6J9 118 aa7.25□□□□□ -1.25
MDC1-205ENST00000425072 TRAV26-1A0A087WT03 109 aa7.25□□□□□ -1.25
MDC1-205ENST00000425072 GAGE12JA6NER3 117 aa7.25□□□□□ -1.25
MDC1-205ENST00000425072 GYPEP15421 78 aa7.25□□□□□ -1.25
MDC1-205ENST00000425072 UBE2D3P61077 147 aa7.25□□□□□ -1.25
MDC1-205ENST00000425072 UBE2D2P62837 147 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms