RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 SFTA2Q6UW10 78 aa7.35□□□□□ -1.23
CMSS1-201ENST00000421999 IGHV1-24A0A0C4DH33 117 aa7.34□□□□□ -1.23
CMSS1-201ENST00000421999 ANKRD39Q53RE8 183 aa7.34□□□□□ -1.23
CMSS1-201ENST00000421999 WFDC10AQ9H1F0 79 aa7.34□□□□□ -1.23
CMSS1-201ENST00000421999 RBMY1BA6NDE4 496 aaKnown RBP7.34□□□□□ -1.23
CMSS1-201ENST00000421999 RBMY1EA6NEQ0 496 aaKnown RBP7.34□□□□□ -1.23
CMSS1-201ENST00000421999 RBMY1DP0C7P1 496 aaKnown RBP7.34□□□□□ -1.23
CMSS1-201ENST00000421999 RBMY1A1P0DJD3 496 aaKnown RBP7.34□□□□□ -1.23
CMSS1-201ENST00000421999 RBMY1CP0DJD4 496 aa7.34□□□□□ -1.23
CMSS1-201ENST00000421999 C1orf43Q9BWL3 253 aa7.34□□□□□ -1.23
CMSS1-201ENST00000421999 MDFICQ9P1T7 246 aa7.34□□□□□ -1.23
CMSS1-201ENST00000421999 HHLA3Q9XRX5 114 aa7.34□□□□□ -1.23
CMSS1-201ENST00000421999 LINC01559Q495D7 138 aa7.33□□□□□ -1.24
CMSS1-201ENST00000421999 C18orf32Q8TCD1 76 aa7.33□□□□□ -1.24
CMSS1-201ENST00000421999 IGHV3-30P01768 117 aa7.33□□□□□ -1.24
CMSS1-201ENST00000421999 IGHV3-33P01772 117 aa7.33□□□□□ -1.24
CMSS1-201ENST00000421999 IGHV3-30-3P0DP02 117 aa7.33□□□□□ -1.24
CMSS1-201ENST00000421999 IGHV3-30-5P0DP03 117 aa7.33□□□□□ -1.24
CMSS1-201ENST00000421999 GATA1P15976 413 aaPredicted RBP7.33□□□□□ -1.24
CMSS1-201ENST00000421999 CHAC1Q9BUX1 264 aa7.33□□□□□ -1.24
CMSS1-201ENST00000421999 TIMM21Q9BVV7 248 aa7.33□□□□□ -1.24
CMSS1-201ENST00000421999 UNC79Q9P2D8 2635 aa7.33□□□□□ -1.24
CMSS1-201ENST00000421999 Q8N8P6 123 aa7.33□□□□□ -1.24
CMSS1-201ENST00000421999 PLEKHB2Q96CS7 222 aa7.33□□□□□ -1.24
CMSS1-201ENST00000421999 HIST1H2BLQ99880 126 aa7.33□□□□□ -1.24
CMSS1-201ENST00000421999 TET2Q6N021 2002 aaPredicted RBP7.33□□□□□ -1.24
CMSS1-201ENST00000421999 FABP2P12104 132 aa7.33□□□□□ -1.24
CMSS1-201ENST00000421999 XCL1P47992 114 aa7.33□□□□□ -1.24
CMSS1-201ENST00000421999 TMEM263Q8WUH6 116 aaKnown RBP7.33□□□□□ -1.24
CMSS1-201ENST00000421999 CST9LQ9H4G1 147 aa7.33□□□□□ -1.24
CMSS1-201ENST00000421999 IGLV10-54A0A075B6I4 117 aa7.32□□□□□ -1.24
CMSS1-201ENST00000421999 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.32□□□□□ -1.24
CMSS1-201ENST00000421999 A0A087X0K7 114 aa7.32□□□□□ -1.24
CMSS1-201ENST00000421999 SMIM27A0A1W2PRY6 76 aa7.32□□□□□ -1.24
CMSS1-201ENST00000421999 IGKV2-29A2NJV5 120 aaPredicted RBP7.32□□□□□ -1.24
CMSS1-201ENST00000421999 NDUFA7O95182 113 aa7.32□□□□□ -1.24
CMSS1-201ENST00000421999 FAM222AQ5U5X8 452 aa7.32□□□□□ -1.24
CMSS1-201ENST00000421999 SPATA25Q9BR10 227 aa7.32□□□□□ -1.24
CMSS1-201ENST00000421999 SLC25A20O43772 301 aa7.32□□□□□ -1.24
CMSS1-201ENST00000421999 PFN2P35080 140 aa7.32□□□□□ -1.24
CMSS1-201ENST00000421999 AMTNQ6UX39 209 aa7.31□□□□□ -1.24
CMSS1-201ENST00000421999 C3orf79P0CE67 100 aa7.31□□□□□ -1.24
CMSS1-201ENST00000421999 IL17DQ8TAD2 202 aa7.31□□□□□ -1.24
CMSS1-201ENST00000421999 KLF12Q9Y4X4 402 aa7.31□□□□□ -1.24
CMSS1-201ENST00000421999 CFAP47Q6ZTR5 3102 aa7.31□□□□□ -1.24
CMSS1-201ENST00000421999 NXPH4O95158 308 aa7.31□□□□□ -1.24
CMSS1-201ENST00000421999 K7EQD1 137 aa7.31□□□□□ -1.24
CMSS1-201ENST00000421999 HIST3H2BBQ8N257 126 aa7.31□□□□□ -1.24
CMSS1-201ENST00000421999 RPL39LQ96EH5 51 aaKnown RBP7.31□□□□□ -1.24
CMSS1-201ENST00000421999 PRO0255Q9UI72 69 aa7.31□□□□□ -1.24
CMSS1-201ENST00000421999 DCHS1Q96JQ0 3298 aa7.31□□□□□ -1.24
CMSS1-201ENST00000421999 GAGE10A6NGK3 116 aa7.3□□□□□ -1.24
CMSS1-201ENST00000421999 Q6ZTI0 123 aa7.3□□□□□ -1.24
CMSS1-201ENST00000421999 C20orf144Q9BQM9 153 aa7.3□□□□□ -1.24
CMSS1-201ENST00000421999 NHP2Q9NX24 153 aaKnown RBP7.3□□□□□ -1.24
CMSS1-201ENST00000421999 MYMXA0A1B0GTQ4 84 aa7.3□□□□□ -1.24
CMSS1-201ENST00000421999 SYS1-DBNDD2H3BUS1 97 aa7.3□□□□□ -1.24
CMSS1-201ENST00000421999 PMVKQ15126 192 aa7.3□□□□□ -1.24
CMSS1-201ENST00000421999 PRSS47A8MTI9 375 aa7.3□□□□□ -1.24
CMSS1-201ENST00000421999 SUMO4Q6EEV6 95 aa7.3□□□□□ -1.24
CMSS1-201ENST00000421999 C20orf78Q9BR46 151 aa7.3□□□□□ -1.24
CMSS1-201ENST00000421999 hDV102S1A0JD36 115 aa7.29□□□□□ -1.24
CMSS1-201ENST00000421999 TMEM238C9JI98 176 aa7.29□□□□□ -1.24
CMSS1-201ENST00000421999 SH2D6Q7Z4S9 175 aa7.29□□□□□ -1.24
CMSS1-201ENST00000421999 C5orf38Q86SI9 138 aa7.29□□□□□ -1.24
CMSS1-201ENST00000421999 TRAV26-1A0A087WT03 109 aa7.29□□□□□ -1.24
CMSS1-201ENST00000421999 NPSP0C0P6 89 aa7.29□□□□□ -1.24
CMSS1-201ENST00000421999 EDN2P20800 178 aa7.29□□□□□ -1.24
CMSS1-201ENST00000421999 DEFB131BA0A096LNP1 70 aa7.28□□□□□ -1.24
CMSS1-201ENST00000421999 PRSS29PA6NIE9 313 aa7.28□□□□□ -1.24
CMSS1-201ENST00000421999 CRIP2P52943 208 aaPredicted RBP7.28□□□□□ -1.24
CMSS1-201ENST00000421999 GDF5OSQ5U4N7 250 aa7.28□□□□□ -1.24
CMSS1-201ENST00000421999 TRBV7-3A0A075B6L6 115 aa7.28□□□□□ -1.24
CMSS1-201ENST00000421999 A0A1B0GV72 72 aa7.28□□□□□ -1.24
CMSS1-201ENST00000421999 KIR3DS1Q14943 382 aa7.28□□□□□ -1.24
CMSS1-201ENST00000421999 TMEM141Q96I45 108 aa7.28□□□□□ -1.24
CMSS1-201ENST00000421999 C20orf173Q96LM9 149 aa7.28□□□□□ -1.24
CMSS1-201ENST00000421999 STPG4Q8N801 248 aa7.28□□□□□ -1.24
CMSS1-201ENST00000421999 KLK12Q9UKR0 248 aa7.28□□□□□ -1.24
CMSS1-201ENST00000421999 STAB1Q9NY15 2570 aa7.28□□□□□ -1.24
CMSS1-201ENST00000421999 ASPMQ8IZT6 3477 aa7.27□□□□□ -1.25
CMSS1-201ENST00000421999 ZNF80P51504 273 aaPredicted RBP7.27□□□□□ -1.25
CMSS1-201ENST00000421999 ZNF664Q8N3J9 261 aa7.27□□□□□ -1.25
CMSS1-201ENST00000421999 VSIG2Q96IQ7 327 aa7.27□□□□□ -1.25
CMSS1-201ENST00000421999 TP53TG3Q9ULZ0 132 aa7.27□□□□□ -1.25
CMSS1-201ENST00000421999 SNHG12Q9BXW3 62 aa7.27□□□□□ -1.25
CMSS1-201ENST00000421999 LINC00322Q6ZN03 302 aaPredicted RBP7.27□□□□□ -1.25
CMSS1-201ENST00000421999 Q0VG73 95 aa7.26□□□□□ -1.25
CMSS1-201ENST00000421999 LAMA5O15230 3695 aa7.26□□□□□ -1.25
CMSS1-201ENST00000421999 LRBAP50851 2863 aa7.26□□□□□ -1.25
CMSS1-201ENST00000421999 BAHCC1Q9P281 2608 aa7.26□□□□□ -1.25
CMSS1-201ENST00000421999 A0A096LNT2 108 aa7.26□□□□□ -1.25
CMSS1-201ENST00000421999 IGHV4-30-4P0DP06 118 aa7.26□□□□□ -1.25
CMSS1-201ENST00000421999 DAZ2Q13117 558 aaKnown RBP7.26□□□□□ -1.25
CMSS1-201ENST00000421999 DAZ4Q86SG3 579 aaKnown RBP7.26□□□□□ -1.25
CMSS1-201ENST00000421999 MRPL52Q86TS9 123 aaKnown RBP7.26□□□□□ -1.25
CMSS1-201ENST00000421999 GATD1Q8NB37 220 aa7.26□□□□□ -1.25
CMSS1-201ENST00000421999 DAZ3Q9NR90 486 aaKnown RBP7.26□□□□□ -1.25
CMSS1-201ENST00000421999 SMIM9A6NGZ8 99 aa7.25□□□□□ -1.25
CMSS1-201ENST00000421999 TRAV8-2A0A0B4J237 113 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms