RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 TSHBP01222 138 aa7.32□□□□□ -1.24
LINC00494-201ENST00000416742 SMIM13P0DJ93 91 aa7.32□□□□□ -1.24
LINC00494-201ENST00000416742 PROK1P58294 105 aa7.32□□□□□ -1.24
LINC00494-201ENST00000416742 TRPT1Q86TN4 253 aaKnown RBP7.32□□□□□ -1.24
LINC00494-201ENST00000416742 HIST1H4GQ99525 98 aa7.32□□□□□ -1.24
LINC00494-201ENST00000416742 ESM1Q9NQ30 184 aa7.32□□□□□ -1.24
LINC00494-201ENST00000416742 RAX2Q96IS3 184 aa7.31□□□□□ -1.24
LINC00494-201ENST00000416742 JMJD8Q96S16 334 aa7.31□□□□□ -1.24
LINC00494-201ENST00000416742 OPRPNQ99935 248 aaPredicted RBP7.31□□□□□ -1.24
LINC00494-201ENST00000416742 NHP2Q9NX24 153 aaKnown RBP7.31□□□□□ -1.24
LINC00494-201ENST00000416742 IGHV3OR16-12A0A075B7B8 117 aa7.31□□□□□ -1.24
LINC00494-201ENST00000416742 K7ERJ3 54 aa7.31□□□□□ -1.24
LINC00494-201ENST00000416742 P0DMU3 169 aa7.31□□□□□ -1.24
LINC00494-201ENST00000416742 FAM231AP0DMU4 169 aa7.31□□□□□ -1.24
LINC00494-201ENST00000416742 FAM231CP0DMU5 169 aa7.31□□□□□ -1.24
LINC00494-201ENST00000416742 CD28P10747 220 aa7.31□□□□□ -1.24
LINC00494-201ENST00000416742 RPL32P62910 135 aaKnown RBP7.31□□□□□ -1.24
LINC00494-201ENST00000416742 PRADC1Q9BSG0 188 aa7.31□□□□□ -1.24
LINC00494-201ENST00000416742 TRBV6-5A0A0K0K1A5 114 aa7.31□□□□□ -1.24
LINC00494-201ENST00000416742 TRBV27A0A0K0K1C4 114 aa7.31□□□□□ -1.24
LINC00494-201ENST00000416742 IGIPA6NJ69 53 aa7.31□□□□□ -1.24
LINC00494-201ENST00000416742 PMVKQ15126 192 aa7.31□□□□□ -1.24
LINC00494-201ENST00000416742 TMEM86BQ8N661 226 aa7.31□□□□□ -1.24
LINC00494-201ENST00000416742 C11orf86A6NJI1 115 aa7.3□□□□□ -1.24
LINC00494-201ENST00000416742 TMEM170BQ5T4T1 132 aa7.3□□□□□ -1.24
LINC00494-201ENST00000416742 XCL2Q9UBD3 114 aa7.3□□□□□ -1.24
LINC00494-201ENST00000416742 CEND1Q8N111 149 aa7.3□□□□□ -1.24
LINC00494-201ENST00000416742 TEX29Q8N6K0 151 aa7.3□□□□□ -1.24
LINC00494-201ENST00000416742 TENM4Q6N022 2769 aa7.3□□□□□ -1.24
LINC00494-201ENST00000416742 MYMXA0A1B0GTQ4 84 aa7.3□□□□□ -1.24
LINC00494-201ENST00000416742 CCL24O00175 119 aa7.29□□□□□ -1.24
LINC00494-201ENST00000416742 SCGB1D4Q6XE38 83 aa7.29□□□□□ -1.24
LINC00494-201ENST00000416742 TMEM141Q96I45 108 aa7.29□□□□□ -1.24
LINC00494-201ENST00000416742 CITED2Q99967 270 aaPredicted RBP7.29□□□□□ -1.24
LINC00494-201ENST00000416742 CST9LQ9H4G1 147 aa7.29□□□□□ -1.24
LINC00494-201ENST00000416742 ZNF815PA8K554 130 aa7.29□□□□□ -1.24
LINC00494-201ENST00000416742 RNASE8Q8TDE3 154 aaKnown RBP7.29□□□□□ -1.24
LINC00494-201ENST00000416742 ITPR2Q14571 2701 aa7.29□□□□□ -1.24
LINC00494-201ENST00000416742 HELZ2Q9BYK8 2649 aaKnown RBP7.29□□□□□ -1.24
LINC00494-201ENST00000416742 E9PLD3 99 aa7.28□□□□□ -1.24
LINC00494-201ENST00000416742 I3L3M4 83 aa7.28□□□□□ -1.24
LINC00494-201ENST00000416742 RIPPLY3P57055 190 aa7.28□□□□□ -1.24
LINC00494-201ENST00000416742 ZNF415Q09FC8 603 aa7.28□□□□□ -1.24
LINC00494-201ENST00000416742 NOTCH2Q04721 2471 aa7.28□□□□□ -1.24
LINC00494-201ENST00000416742 JMJD1CQ15652 2540 aa7.28□□□□□ -1.24
LINC00494-201ENST00000416742 GTF2H5Q6ZYL4 71 aa7.28□□□□□ -1.24
LINC00494-201ENST00000416742 TIMM17AQ99595 171 aa7.28□□□□□ -1.24
LINC00494-201ENST00000416742 SPAG8Q99932 426 aaPredicted RBP7.28□□□□□ -1.24
LINC00494-201ENST00000416742 MRPL16Q9NX20 251 aaKnown RBP7.28□□□□□ -1.24
LINC00494-201ENST00000416742 IGLV4-69A0A075B6H9 119 aa7.28□□□□□ -1.24
LINC00494-201ENST00000416742 TRAV2A0A0B4J234 112 aa7.28□□□□□ -1.24
LINC00494-201ENST00000416742 LINC01549A6NIU2 74 aa7.28□□□□□ -1.24
LINC00494-201ENST00000416742 M0R2P5 195 aa7.28□□□□□ -1.24
LINC00494-201ENST00000416742 STHQ8IWL8 128 aa7.28□□□□□ -1.24
LINC00494-201ENST00000416742 TNFRSF18Q9Y5U5 241 aa7.28□□□□□ -1.24
LINC00494-201ENST00000416742 HERVK_113P61574 105 aa7.27□□□□□ -1.25
LINC00494-201ENST00000416742 Q9UF83 564 aa7.27□□□□□ -1.25
LINC00494-201ENST00000416742 GAGE12BA1L429 117 aa7.27□□□□□ -1.25
LINC00494-201ENST00000416742 J3QKU1 62 aa7.27□□□□□ -1.25
LINC00494-201ENST00000416742 RHOHQ15669 191 aa7.27□□□□□ -1.25
LINC00494-201ENST00000416742 ODF3L2Q3SX64 289 aa7.27□□□□□ -1.25
LINC00494-201ENST00000416742 SAMD5Q5TGI4 173 aa7.27□□□□□ -1.25
LINC00494-201ENST00000416742 TM2D2Q9BX73 214 aa7.27□□□□□ -1.25
LINC00494-201ENST00000416742 SPCS1Q9Y6A9 102 aa7.27□□□□□ -1.25
LINC00494-201ENST00000416742 INSP01308 110 aa7.27□□□□□ -1.25
LINC00494-201ENST00000416742 PAPPA-AS1Q5QFB9 102 aa7.27□□□□□ -1.25
LINC00494-201ENST00000416742 C20orf203Q8NBC4 194 aa7.27□□□□□ -1.25
LINC00494-201ENST00000416742 PLEKHB2Q96CS7 222 aa7.27□□□□□ -1.25
LINC00494-201ENST00000416742 A0A1W2PPM0 123 aa7.26□□□□□ -1.25
LINC00494-201ENST00000416742 A8MWV9 139 aa7.26□□□□□ -1.25
LINC00494-201ENST00000416742 FABP2P12104 132 aa7.26□□□□□ -1.25
LINC00494-201ENST00000416742 SRSF9Q13242 221 aaKnown RBP eCLIP7.26□□□□□ -1.25
LINC00494-201ENST00000416742 Q6ZSN1 163 aa7.26□□□□□ -1.25
LINC00494-201ENST00000416742 A8MTW9 85 aa7.26□□□□□ -1.25
LINC00494-201ENST00000416742 RNF151Q2KHN1 245 aa7.26□□□□□ -1.25
LINC00494-201ENST00000416742 ZNRF2Q8NHG8 242 aa7.26□□□□□ -1.25
LINC00494-201ENST00000416742 LINC01006Q8NI28 216 aa7.26□□□□□ -1.25
LINC00494-201ENST00000416742 C2CD3Q4AC94 2353 aa7.26□□□□□ -1.25
LINC00494-201ENST00000416742 AZU1P20160 251 aa7.26□□□□□ -1.25
LINC00494-201ENST00000416742 VCX2Q9H322 139 aa7.26□□□□□ -1.25
LINC00494-201ENST00000416742 IGHV3-64A0A075B6Q5 118 aa7.25□□□□□ -1.25
LINC00494-201ENST00000416742 K7EP34 96 aa7.25□□□□□ -1.25
LINC00494-201ENST00000416742 PLA2G2AP14555 144 aa7.25□□□□□ -1.25
LINC00494-201ENST00000416742 TAL2Q16559 108 aa7.25□□□□□ -1.25
LINC00494-201ENST00000416742 NSUN5P1Q3KNT7 163 aa7.25□□□□□ -1.25
LINC00494-201ENST00000416742 PHLDA1Q8WV24 401 aaPredicted RBP7.25□□□□□ -1.25
LINC00494-201ENST00000416742 IGHV3-38A0A0C4DH36 116 aa7.25□□□□□ -1.25
LINC00494-201ENST00000416742 SAP30O75446 220 aa7.25□□□□□ -1.25
LINC00494-201ENST00000416742 KRTAP1-1Q07627 177 aa7.25□□□□□ -1.25
LINC00494-201ENST00000416742 C12orf74Q32Q52 190 aa7.25□□□□□ -1.25
LINC00494-201ENST00000416742 CEMP1Q6PRD7 247 aaPredicted RBP7.25□□□□□ -1.25
LINC00494-201ENST00000416742 HIVEP2P31629 2446 aa7.25□□□□□ -1.25
LINC00494-201ENST00000416742 FASNP49327 2511 aaKnown RBP7.25□□□□□ -1.25
LINC00494-201ENST00000416742 RNASE13Q5GAN3 156 aaKnown RBP7.24□□□□□ -1.25
LINC00494-201ENST00000416742 CFAP126Q5VTH2 177 aa7.24□□□□□ -1.25
LINC00494-201ENST00000416742 TSSC4Q9Y5U2 329 aaPredicted RBP7.24□□□□□ -1.25
LINC00494-201ENST00000416742 TRBV7-3A0A075B6L6 115 aa7.24□□□□□ -1.25
LINC00494-201ENST00000416742 AKAP9Q99996 3911 aa7.24□□□□□ -1.25
LINC00494-201ENST00000416742 A0A0J9YXV3 536 aa7.24□□□□□ -1.25
LINC00494-201ENST00000416742 C11orf72Q8NBR9 251 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms