RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 ZNF479Q96JC4 524 aa11.59□□□□□ -0.55
CDC42EP1-202ENST00000415670 LINC00315P59091 139 aa11.58□□□□□ -0.56
CDC42EP1-202ENST00000415670 FAM74A4Q5TZK3 123 aa11.58□□□□□ -0.56
CDC42EP1-202ENST00000415670 COX19Q49B96 90 aa11.57□□□□□ -0.56
CDC42EP1-202ENST00000415670 IGHV3-73A0A0B4J1V6 119 aa11.56□□□□□ -0.56
CDC42EP1-202ENST00000415670 FHL2Q14192 279 aa11.56□□□□□ -0.56
CDC42EP1-202ENST00000415670 C1orf134Q5TEV5 83 aa11.56□□□□□ -0.56
CDC42EP1-202ENST00000415670 TMEM136Q6ZRR5 245 aa11.56□□□□□ -0.56
CDC42EP1-202ENST00000415670 UBE2DNLQ8IWF7 75 aa11.56□□□□□ -0.56
CDC42EP1-202ENST00000415670 Q8N1X5 172 aa11.56□□□□□ -0.56
CDC42EP1-202ENST00000415670 FAM210BQ96KR6 192 aa11.56□□□□□ -0.56
CDC42EP1-202ENST00000415670 DNAH5Q8TE73 4624 aa11.55□□□□□ -0.56
CDC42EP1-202ENST00000415670 TRGV4A0A0C4DH28 118 aa11.55□□□□□ -0.56
CDC42EP1-202ENST00000415670 CDK2AP2O75956 126 aa11.55□□□□□ -0.56
CDC42EP1-202ENST00000415670 MGPP08493 103 aa11.55□□□□□ -0.56
CDC42EP1-202ENST00000415670 HOXA5P20719 270 aa11.55□□□□□ -0.56
CDC42EP1-202ENST00000415670 RAB4BP61018 213 aa11.55□□□□□ -0.56
CDC42EP1-202ENST00000415670 AMN1Q8IY45 258 aa11.55□□□□□ -0.56
CDC42EP1-202ENST00000415670 HTN3P15516 51 aa11.54□□□□□ -0.56
CDC42EP1-202ENST00000415670 GATA1P15976 413 aaPredicted RBP11.54□□□□□ -0.56
CDC42EP1-202ENST00000415670 RAB4AP20338 218 aa11.54□□□□□ -0.56
CDC42EP1-202ENST00000415670 ZNF56Q15929 161 aa11.54□□□□□ -0.56
CDC42EP1-202ENST00000415670 FAM104BQ5XKR9 115 aa11.54□□□□□ -0.56
CDC42EP1-202ENST00000415670 RNF185Q96GF1 192 aa11.54□□□□□ -0.56
CDC42EP1-202ENST00000415670 GNB1LQ9BYB4 327 aa11.54□□□□□ -0.56
CDC42EP1-202ENST00000415670 COLCA2A8K830 154 aa11.53□□□□□ -0.56
CDC42EP1-202ENST00000415670 F5H697 171 aa11.53□□□□□ -0.56
CDC42EP1-202ENST00000415670 F5H768 121 aa11.53□□□□□ -0.56
CDC42EP1-202ENST00000415670 HLA-DQA1P01909 254 aa11.53□□□□□ -0.56
CDC42EP1-202ENST00000415670 SLAQ13239 276 aa11.53□□□□□ -0.56
CDC42EP1-202ENST00000415670 Q6ZSN1 163 aa11.53□□□□□ -0.56
CDC42EP1-202ENST00000415670 TRBV6-4A0A1B0GX49 114 aa11.52□□□□□ -0.57
CDC42EP1-202ENST00000415670 MT-ND6P03923 174 aa11.52□□□□□ -0.57
CDC42EP1-202ENST00000415670 SUMO4Q6EEV6 95 aa11.52□□□□□ -0.57
CDC42EP1-202ENST00000415670 FRZBQ92765 325 aa11.52□□□□□ -0.57
CDC42EP1-202ENST00000415670 PRO0255Q9UI72 69 aa11.52□□□□□ -0.57
CDC42EP1-202ENST00000415670 HHLA3Q9XRX5 114 aa11.52□□□□□ -0.57
CDC42EP1-202ENST00000415670 CRYBA4P53673 196 aa11.51□□□□□ -0.57
CDC42EP1-202ENST00000415670 MRPL51Q4U2R6 128 aaKnown RBP11.51□□□□□ -0.57
CDC42EP1-202ENST00000415670 SLC25A29Q8N8R3 303 aa11.51□□□□□ -0.57
CDC42EP1-202ENST00000415670 MRAP2Q96G30 205 aa11.51□□□□□ -0.57
CDC42EP1-202ENST00000415670 K7EQD1 137 aa11.5□□□□□ -0.57
CDC42EP1-202ENST00000415670 TRAV26-2A0A0B4J265 109 aa11.49□□□□□ -0.57
CDC42EP1-202ENST00000415670 H7C1H1 209 aa11.49□□□□□ -0.57
CDC42EP1-202ENST00000415670 M0QY20 66 aa11.49□□□□□ -0.57
CDC42EP1-202ENST00000415670 PAX4O43316 350 aa11.49□□□□□ -0.57
CDC42EP1-202ENST00000415670 APCSP02743 223 aa11.49□□□□□ -0.57
CDC42EP1-202ENST00000415670 RHOHQ15669 191 aa11.49□□□□□ -0.57
CDC42EP1-202ENST00000415670 VSIG2Q96IQ7 327 aa11.49□□□□□ -0.57
CDC42EP1-202ENST00000415670 MRPL18Q9H0U6 180 aaKnown RBP11.49□□□□□ -0.57
CDC42EP1-202ENST00000415670 TRAPPC1Q9Y5R8 145 aa11.49□□□□□ -0.57
CDC42EP1-202ENST00000415670 TRAV26-1A0A087WT03 109 aa11.48□□□□□ -0.57
CDC42EP1-202ENST00000415670 TRBV10-1A0A0K0K1A3 114 aa11.48□□□□□ -0.57
CDC42EP1-202ENST00000415670 RAB5AP20339 215 aa11.48□□□□□ -0.57
CDC42EP1-202ENST00000415670 PRADC1Q9BSG0 188 aa11.48□□□□□ -0.57
CDC42EP1-202ENST00000415670 H3BNG1 76 aa11.47□□□□□ -0.57
CDC42EP1-202ENST00000415670 PPBPP02775 128 aa11.47□□□□□ -0.57
CDC42EP1-202ENST00000415670 A0A0J9YY99 117 aa11.46□□□□□ -0.57
CDC42EP1-202ENST00000415670 D6R8Y8 96 aa11.46□□□□□ -0.57
CDC42EP1-202ENST00000415670 SMKR1H3BMG3 65 aa11.46□□□□□ -0.57
CDC42EP1-202ENST00000415670 GAS8-AS1O95177 125 aa11.46□□□□□ -0.57
CDC42EP1-202ENST00000415670 NCR2O95944 276 aa11.46□□□□□ -0.57
CDC42EP1-202ENST00000415670 CKS2P33552 79 aa11.46□□□□□ -0.57
CDC42EP1-202ENST00000415670 RPS10P46783 165 aaKnown RBP11.46□□□□□ -0.57
CDC42EP1-202ENST00000415670 FABP9Q0Z7S8 132 aa11.46□□□□□ -0.57
CDC42EP1-202ENST00000415670 SPATA12Q7Z6I5 190 aa11.46□□□□□ -0.57
CDC42EP1-202ENST00000415670 ORMDL3Q8N138 153 aa11.46□□□□□ -0.57
CDC42EP1-202ENST00000415670 Q9UF83 564 aa11.46□□□□□ -0.57
CDC42EP1-202ENST00000415670 LOC100131303A0A0U1RQF7 123 aa11.45□□□□□ -0.58
CDC42EP1-202ENST00000415670 KRTAP10-2P60368 255 aa11.45□□□□□ -0.58
CDC42EP1-202ENST00000415670 KIAA1644Q3SXP7 199 aa11.45□□□□□ -0.58
CDC42EP1-202ENST00000415670 NEXN-AS1Q8NBZ9 246 aa11.45□□□□□ -0.58
CDC42EP1-202ENST00000415670 DNAJC30Q96LL9 226 aa11.45□□□□□ -0.58
CDC42EP1-202ENST00000415670 NIT2Q9NQR4 276 aa11.45□□□□□ -0.58
CDC42EP1-202ENST00000415670 DMBT1Q9UGM3 2413 aaPredicted RBP11.44□□□□□ -0.58
CDC42EP1-202ENST00000415670 PPP1R17O96001 155 aa11.44□□□□□ -0.58
CDC42EP1-202ENST00000415670 GYPEP15421 78 aa11.44□□□□□ -0.58
CDC42EP1-202ENST00000415670 FUSP35637 526 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDC42EP1-202ENST00000415670 RPL36AP83881 106 aaKnown RBP11.44□□□□□ -0.58
CDC42EP1-202ENST00000415670 NRACQ8N912 160 aa11.44□□□□□ -0.58
CDC42EP1-202ENST00000415670 RPL36ALQ969Q0 106 aaKnown RBP11.44□□□□□ -0.58
CDC42EP1-202ENST00000415670 RPL39LQ96EH5 51 aaKnown RBP11.44□□□□□ -0.58
CDC42EP1-202ENST00000415670 TRBV7-3A0A075B6L6 115 aa11.43□□□□□ -0.58
CDC42EP1-202ENST00000415670 TRBV6-5A0A0K0K1A5 114 aa11.43□□□□□ -0.58
CDC42EP1-202ENST00000415670 PHOX2AO14813 284 aa11.43□□□□□ -0.58
CDC42EP1-202ENST00000415670 OR10J3Q5JRS4 329 aa11.43□□□□□ -0.58
CDC42EP1-202ENST00000415670 PRELID3AQ96N28 172 aa11.43□□□□□ -0.58
CDC42EP1-202ENST00000415670 ICOSQ9Y6W8 199 aa11.43□□□□□ -0.58
CDC42EP1-202ENST00000415670 GAGE12JA6NER3 117 aa11.42□□□□□ -0.58
CDC42EP1-202ENST00000415670 NPYP01303 97 aa11.42□□□□□ -0.58
CDC42EP1-202ENST00000415670 LINC00694P0DN24 101 aa11.42□□□□□ -0.58
CDC42EP1-202ENST00000415670 GAGE1Q13065 139 aa11.42□□□□□ -0.58
CDC42EP1-202ENST00000415670 GAGE4Q13068 117 aa11.42□□□□□ -0.58
CDC42EP1-202ENST00000415670 GAGE5Q13069 117 aa11.42□□□□□ -0.58
CDC42EP1-202ENST00000415670 GAGE13Q4V321 117 aa11.42□□□□□ -0.58
CDC42EP1-202ENST00000415670 C6orf223Q8N319 242 aa11.42□□□□□ -0.58
CDC42EP1-202ENST00000415670 C15orf53Q8NAA6 179 aa11.42□□□□□ -0.58
CDC42EP1-202ENST00000415670 ZNRF2Q8NHG8 242 aa11.42□□□□□ -0.58
CDC42EP1-202ENST00000415670 LAMTOR2Q9Y2Q5 125 aa11.42□□□□□ -0.58
CDC42EP1-202ENST00000415670 TNFRSF18Q9Y5U5 241 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms