RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 LINC00315P59091 139 aa11.95□□□□□ -0.5
SCAMP4-204ENST00000414057 PLAC8L1A1L4L8 177 aa11.95□□□□□ -0.5
SCAMP4-204ENST00000414057 S100A2P29034 98 aa11.95□□□□□ -0.5
SCAMP4-204ENST00000414057 HIST3H2BBQ8N257 126 aa11.95□□□□□ -0.5
SCAMP4-204ENST00000414057 CHCHD1Q96BP2 118 aaKnown RBP11.95□□□□□ -0.5
SCAMP4-204ENST00000414057 PRSS47A8MTI9 375 aa11.94□□□□□ -0.5
SCAMP4-204ENST00000414057 CIDEAO60543 219 aa11.94□□□□□ -0.5
SCAMP4-204ENST00000414057 SERF1AO75920 110 aa11.94□□□□□ -0.5
SCAMP4-204ENST00000414057 TNFRSF6BO95407 300 aa11.94□□□□□ -0.5
SCAMP4-204ENST00000414057 DAD1P61803 113 aa11.94□□□□□ -0.5
SCAMP4-204ENST00000414057 ZFP2Q6ZN57 461 aa11.94□□□□□ -0.5
SCAMP4-204ENST00000414057 MAP1LC3AQ9H492 121 aa11.94□□□□□ -0.5
SCAMP4-204ENST00000414057 JPT2Q9H910 190 aa11.94□□□□□ -0.5
SCAMP4-204ENST00000414057 A0A087WWL8 130 aa11.93□□□□□ -0.5
SCAMP4-204ENST00000414057 TRGV1A0A0A0MS02 117 aa11.93□□□□□ -0.5
SCAMP4-204ENST00000414057 RS1O15537 224 aa11.93□□□□□ -0.5
SCAMP4-204ENST00000414057 NCR2O95944 276 aa11.93□□□□□ -0.5
SCAMP4-204ENST00000414057 IQCJQ1A5X6 159 aa11.93□□□□□ -0.5
SCAMP4-204ENST00000414057 FAM74A4Q5TZK3 123 aa11.93□□□□□ -0.5
SCAMP4-204ENST00000414057 MRPL16Q9NX20 251 aaKnown RBP11.93□□□□□ -0.5
SCAMP4-204ENST00000414057 FRAS1Q86XX4 4008 aa11.93□□□□□ -0.5
SCAMP4-204ENST00000414057 LYRM9A8MSI8 78 aa11.92□□□□□ -0.5
SCAMP4-204ENST00000414057 SMKR1H3BMG3 65 aa11.92□□□□□ -0.5
SCAMP4-204ENST00000414057 H7C1H1 209 aa11.92□□□□□ -0.5
SCAMP4-204ENST00000414057 NPYP01303 97 aa11.92□□□□□ -0.5
SCAMP4-204ENST00000414057 CFAP126Q5VTH2 177 aa11.92□□□□□ -0.5
SCAMP4-204ENST00000414057 NRACQ8N912 160 aa11.92□□□□□ -0.5
SCAMP4-204ENST00000414057 PACRGQ96M98 296 aaPredicted RBP11.92□□□□□ -0.5
SCAMP4-204ENST00000414057 C20orf78Q9BR46 151 aa11.92□□□□□ -0.5
SCAMP4-204ENST00000414057 NOP10Q9NPE3 64 aaKnown RBP11.92□□□□□ -0.5
SCAMP4-204ENST00000414057 NXT2Q9NPJ8 142 aaKnown RBP11.92□□□□□ -0.5
SCAMP4-204ENST00000414057 DNAH6Q9C0G6 4158 aa11.92□□□□□ -0.5
SCAMP4-204ENST00000414057 F5H697 171 aa11.91□□□□□ -0.5
SCAMP4-204ENST00000414057 LINC00614P0C842 121 aa11.91□□□□□ -0.5
SCAMP4-204ENST00000414057 HTN3P15516 51 aa11.91□□□□□ -0.5
SCAMP4-204ENST00000414057 LINC00310P59036 64 aa11.91□□□□□ -0.5
SCAMP4-204ENST00000414057 ZNF56Q15929 161 aa11.91□□□□□ -0.5
SCAMP4-204ENST00000414057 SUMO4Q6EEV6 95 aa11.91□□□□□ -0.5
SCAMP4-204ENST00000414057 UFSP1Q6NVU6 142 aa11.91□□□□□ -0.5
SCAMP4-204ENST00000414057 LINC00336Q6ZUF6 198 aa11.91□□□□□ -0.5
SCAMP4-204ENST00000414057 NIT1Q86X76 327 aa11.91□□□□□ -0.5
SCAMP4-204ENST00000414057 UBE2DNLQ8IWF7 75 aa11.91□□□□□ -0.5
SCAMP4-204ENST00000414057 PRSS3P2Q8NHM4 247 aa11.91□□□□□ -0.5
SCAMP4-204ENST00000414057 TMEM18Q96B42 140 aa11.91□□□□□ -0.5
SCAMP4-204ENST00000414057 SAMD10Q9BYL1 202 aa11.91□□□□□ -0.5
SCAMP4-204ENST00000414057 DNAH10Q8IVF4 4471 aa11.91□□□□□ -0.5
SCAMP4-204ENST00000414057 TRAV26-2A0A0B4J265 109 aa11.9□□□□□ -0.5
SCAMP4-204ENST00000414057 TRAV4A0A0B4J268 109 aa11.9□□□□□ -0.5
SCAMP4-204ENST00000414057 HSBP1O75506 76 aa11.9□□□□□ -0.5
SCAMP4-204ENST00000414057 PMCHP20382 165 aa11.9□□□□□ -0.5
SCAMP4-204ENST00000414057 RNASEKQ6P5S7 137 aaKnown RBP11.9□□□□□ -0.5
SCAMP4-204ENST00000414057 RPL32P62910 135 aaKnown RBP11.89□□□□□ -0.51
SCAMP4-204ENST00000414057 Q6ZTI0 123 aa11.89□□□□□ -0.51
SCAMP4-204ENST00000414057 FA2HQ7L5A8 372 aa11.89□□□□□ -0.51
SCAMP4-204ENST00000414057 OR4C5Q8NGB2 326 aa11.89□□□□□ -0.51
SCAMP4-204ENST00000414057 AP5S1Q9NUS5 200 aa11.89□□□□□ -0.51
SCAMP4-204ENST00000414057 PDZD11Q5EBL8 140 aa11.89□□□□□ -0.51
SCAMP4-204ENST00000414057 C15orf53Q8NAA6 179 aa11.89□□□□□ -0.51
SCAMP4-204ENST00000414057 C18orf15Q96N68 181 aa11.89□□□□□ -0.51
SCAMP4-204ENST00000414057 TRBV6-5A0A0K0K1A5 114 aa11.88□□□□□ -0.51
SCAMP4-204ENST00000414057 LINC01546A6NGU7 62 aa11.88□□□□□ -0.51
SCAMP4-204ENST00000414057 K7EMI3 77 aa11.88□□□□□ -0.51
SCAMP4-204ENST00000414057 M0QY20 66 aa11.88□□□□□ -0.51
SCAMP4-204ENST00000414057 NUPR1O60356 82 aa11.88□□□□□ -0.51
SCAMP4-204ENST00000414057 GAS8-AS1O95177 125 aa11.88□□□□□ -0.51
SCAMP4-204ENST00000414057 GATA1P15976 413 aaPredicted RBP11.88□□□□□ -0.51
SCAMP4-204ENST00000414057 SUMO2P61956 95 aaKnown RBP11.88□□□□□ -0.51
SCAMP4-204ENST00000414057 LINC00612Q8N6U2 182 aa11.88□□□□□ -0.51
SCAMP4-204ENST00000414057 URB1-AS1Q96HZ7 61 aa11.88□□□□□ -0.51
SCAMP4-204ENST00000414057 HIST1H2BLQ99880 126 aa11.88□□□□□ -0.51
SCAMP4-204ENST00000414057 TRGV2A0A075B6R0 118 aa11.87□□□□□ -0.51
SCAMP4-204ENST00000414057 IGHV3-53P01767 116 aa11.87□□□□□ -0.51
SCAMP4-204ENST00000414057 IFI27P40305 119 aaPredicted RBP11.87□□□□□ -0.51
SCAMP4-204ENST00000414057 Q8N8P6 123 aa11.87□□□□□ -0.51
SCAMP4-204ENST00000414057 ST20Q9HBF5 79 aa11.87□□□□□ -0.51
SCAMP4-204ENST00000414057 NIT2Q9NQR4 276 aa11.87□□□□□ -0.51
SCAMP4-204ENST00000414057 LOC389332A0A1B0GUA5 103 aa11.86□□□□□ -0.51
SCAMP4-204ENST00000414057 IFITM10A6NMD0 228 aa11.86□□□□□ -0.51
SCAMP4-204ENST00000414057 DEFB130BP0DP73 79 aa11.86□□□□□ -0.51
SCAMP4-204ENST00000414057 DEFB130AP0DP74 79 aa11.86□□□□□ -0.51
SCAMP4-204ENST00000414057 FABP4P15090 132 aa11.86□□□□□ -0.51
SCAMP4-204ENST00000414057 SMIM2Q9BVW6 85 aa11.86□□□□□ -0.51
SCAMP4-204ENST00000414057 AMTP48728 403 aa11.85□□□□□ -0.51
SCAMP4-204ENST00000414057 RPL39LQ96EH5 51 aaKnown RBP11.85□□□□□ -0.51
SCAMP4-204ENST00000414057 NACAE9PAV3 2078 aa11.84□□□□□ -0.51
SCAMP4-204ENST00000414057 IGLV2-18A0A075B6J9 118 aa11.84□□□□□ -0.51
SCAMP4-204ENST00000414057 GAGE12BA1L429 117 aa11.84□□□□□ -0.51
SCAMP4-204ENST00000414057 GAGE7O76087 117 aa11.84□□□□□ -0.51
SCAMP4-204ENST00000414057 GAGE12FP0CL80 117 aa11.84□□□□□ -0.51
SCAMP4-204ENST00000414057 GAGE12GP0CL81 117 aa11.84□□□□□ -0.51
SCAMP4-204ENST00000414057 GAGE12IP0CL82 117 aa11.84□□□□□ -0.51
SCAMP4-204ENST00000414057 DNAJC30Q96LL9 226 aa11.84□□□□□ -0.51
SCAMP4-204ENST00000414057 M0R2N4 97 aa11.83□□□□□ -0.52
SCAMP4-204ENST00000414057 ATP5G1P05496 136 aa11.83□□□□□ -0.52
SCAMP4-204ENST00000414057 IGHV3-73A0A0B4J1V6 119 aa11.83□□□□□ -0.52
SCAMP4-204ENST00000414057 TRBV10-1A0A0K0K1A3 114 aa11.83□□□□□ -0.52
SCAMP4-204ENST00000414057 F5H768 121 aa11.83□□□□□ -0.52
SCAMP4-204ENST00000414057 TCAPO15273 167 aa11.83□□□□□ -0.52
SCAMP4-204ENST00000414057 AKR1D1P51857 326 aa11.83□□□□□ -0.52
SCAMP4-204ENST00000414057 POLR2KP53803 58 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms