RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 MALRD1Q5VYJ5 2156 aa10.51□□□□□ -0.73
SMARCA4-202ENST00000413806 TP73-AS1Q9UF72 201 aa10.51□□□□□ -0.73
SMARCA4-202ENST00000413806 EIF4EBP1Q13541 118 aaPredicted RBP10.51□□□□□ -0.73
SMARCA4-202ENST00000413806 ODF3BA8MYP8 253 aa10.5□□□□□ -0.73
SMARCA4-202ENST00000413806 BRWD1-AS2P59051 145 aa10.5□□□□□ -0.73
SMARCA4-202ENST00000413806 CXCL5P42830 114 aa10.5□□□□□ -0.73
SMARCA4-202ENST00000413806 A0A0J9YY99 117 aa10.5□□□□□ -0.73
SMARCA4-202ENST00000413806 WFDC11Q8NEX6 87 aa10.5□□□□□ -0.73
SMARCA4-202ENST00000413806 ZNF295-AS1Q8N0V1 137 aa10.5□□□□□ -0.73
SMARCA4-202ENST00000413806 LRRC75A-AS1Q8N1F1 130 aa10.5□□□□□ -0.73
SMARCA4-202ENST00000413806 C4orf3Q8WVX3 66 aa10.5□□□□□ -0.73
SMARCA4-202ENST00000413806 RIF1Q5UIP0 2472 aaKnown RBP10.49□□□□□ -0.73
SMARCA4-202ENST00000413806 FSTL3O95633 263 aa10.49□□□□□ -0.73
SMARCA4-202ENST00000413806 IGLV2-8P01709 118 aa10.49□□□□□ -0.73
SMARCA4-202ENST00000413806 GTF3C1Q12789 2109 aa10.49□□□□□ -0.73
SMARCA4-202ENST00000413806 RPL39P62891 51 aaKnown RBP10.49□□□□□ -0.73
SMARCA4-202ENST00000413806 A6NDX4 124 aa10.49□□□□□ -0.73
SMARCA4-202ENST00000413806 Q9HAA7 133 aa10.49□□□□□ -0.73
SMARCA4-202ENST00000413806 GYPEP15421 78 aa10.49□□□□□ -0.73
SMARCA4-202ENST00000413806 Q6ZQT7 251 aa10.49□□□□□ -0.73
SMARCA4-202ENST00000413806 TNRC6AQ8NDV7 1962 aaKnown RBP10.49□□□□□ -0.73
SMARCA4-202ENST00000413806 SHANK1Q9Y566 2161 aa10.48□□□□□ -0.73
SMARCA4-202ENST00000413806 TRBV7-3A0A075B6L6 115 aa10.48□□□□□ -0.73
SMARCA4-202ENST00000413806 PROP1O75360 226 aa10.48□□□□□ -0.73
SMARCA4-202ENST00000413806 C5orf38Q86SI9 138 aa10.48□□□□□ -0.73
SMARCA4-202ENST00000413806 Q8NA96 180 aa10.47□□□□□ -0.73
SMARCA4-202ENST00000413806 TM2D2Q9BX73 214 aa10.47□□□□□ -0.73
SMARCA4-202ENST00000413806 TMEM256-PLSCR3K7ERE1 68 aa10.47□□□□□ -0.73
SMARCA4-202ENST00000413806 COX7A2LO14548 114 aa10.47□□□□□ -0.73
SMARCA4-202ENST00000413806 WNK2Q9Y3S1 2297 aa10.46□□□□□ -0.73
SMARCA4-202ENST00000413806 IGKV2D-24A0A075B6R9 120 aa10.46□□□□□ -0.73
SMARCA4-202ENST00000413806 A0A0J9YX75 114 aa10.46□□□□□ -0.73
SMARCA4-202ENST00000413806 SPART-AS1P0CW21 52 aa10.46□□□□□ -0.73
SMARCA4-202ENST00000413806 WISP2O76076 250 aa10.46□□□□□ -0.74
SMARCA4-202ENST00000413806 LOXL1Q08397 574 aaPredicted RBP10.46□□□□□ -0.74
SMARCA4-202ENST00000413806 HIST2H2BCQ6DN03 193 aa10.45□□□□□ -0.74
SMARCA4-202ENST00000413806 YPEL4Q96NS1 127 aa10.45□□□□□ -0.74
SMARCA4-202ENST00000413806 MYCNOSP40205 109 aa10.45□□□□□ -0.74
SMARCA4-202ENST00000413806 ODF3Q96PU9 254 aa10.45□□□□□ -0.74
SMARCA4-202ENST00000413806 LINC00694P0DN24 101 aa10.45□□□□□ -0.74
SMARCA4-202ENST00000413806 NFE4Q86UQ8 179 aa10.45□□□□□ -0.74
SMARCA4-202ENST00000413806 CCDC140Q96MF4 163 aa10.45□□□□□ -0.74
SMARCA4-202ENST00000413806 ZMAT4Q9H898 229 aa10.45□□□□□ -0.74
SMARCA4-202ENST00000413806 MLST8Q9BVC4 326 aa10.45□□□□□ -0.74
SMARCA4-202ENST00000413806 CADP27708 2225 aa10.45□□□□□ -0.74
SMARCA4-202ENST00000413806 UNQ9165/PRO28630Q6UXU0 137 aa10.44□□□□□ -0.74
SMARCA4-202ENST00000413806 NCR3O14931 201 aa10.44□□□□□ -0.74
SMARCA4-202ENST00000413806 C20orf203Q8NBC4 194 aa10.44□□□□□ -0.74
SMARCA4-202ENST00000413806 C20orf173Q96LM9 149 aa10.44□□□□□ -0.74
SMARCA4-202ENST00000413806 DOCK10Q96BY6 2186 aa10.44□□□□□ -0.74
SMARCA4-202ENST00000413806 MIAQ16674 131 aa10.44□□□□□ -0.74
SMARCA4-202ENST00000413806 IGHV1-58A0A0C4DH39 117 aa10.43□□□□□ -0.74
SMARCA4-202ENST00000413806 ARFGEF3Q5TH69 2177 aa10.43□□□□□ -0.74
SMARCA4-202ENST00000413806 MED13Q9UHV7 2174 aa10.43□□□□□ -0.74
SMARCA4-202ENST00000413806 TNFRSF13BO14836 293 aaPredicted RBP10.43□□□□□ -0.74
SMARCA4-202ENST00000413806 ATP5EP56381 51 aaPredicted RBP10.43□□□□□ -0.74
SMARCA4-202ENST00000413806 HIGD2BQ4VC39 106 aa10.43□□□□□ -0.74
SMARCA4-202ENST00000413806 SMIM9A6NGZ8 99 aa10.43□□□□□ -0.74
SMARCA4-202ENST00000413806 ATP5EP2Q5VTU8 51 aa10.42□□□□□ -0.74
SMARCA4-202ENST00000413806 ADAMTS9Q9P2N4 1935 aa10.42□□□□□ -0.74
SMARCA4-202ENST00000413806 XGP55808 180 aa10.42□□□□□ -0.74
SMARCA4-202ENST00000413806 UBE2BP63146 152 aa10.42□□□□□ -0.74
SMARCA4-202ENST00000413806 MBD6Q96DN6 1003 aa10.42□□□□□ -0.74
SMARCA4-202ENST00000413806 CAMK2N2Q96S95 79 aa10.42□□□□□ -0.74
SMARCA4-202ENST00000413806 FAM110AQ9BQ89 295 aa10.42□□□□□ -0.74
SMARCA4-202ENST00000413806 LINC00322Q6ZN03 302 aaPredicted RBP10.42□□□□□ -0.74
SMARCA4-202ENST00000413806 SERP2Q8N6R1 65 aa10.42□□□□□ -0.74
SMARCA4-202ENST00000413806 IGKV2D-26A0A0A0MRZ7 120 aa10.42□□□□□ -0.74
SMARCA4-202ENST00000413806 PDE6GP18545 87 aa10.42□□□□□ -0.74
SMARCA4-202ENST00000413806 ZNF80P51504 273 aaPredicted RBP10.42□□□□□ -0.74
SMARCA4-202ENST00000413806 GDF5OSQ5U4N7 250 aa10.42□□□□□ -0.74
SMARCA4-202ENST00000413806 C1orf229Q6ZS94 237 aaPredicted RBP10.42□□□□□ -0.74
SMARCA4-202ENST00000413806 CACNA1BQ00975 2339 aa10.41□□□□□ -0.74
SMARCA4-202ENST00000413806 ETDCA0A1B0GVM5 59 aa10.41□□□□□ -0.74
SMARCA4-202ENST00000413806 NDUFB1O75438 58 aa10.41□□□□□ -0.74
SMARCA4-202ENST00000413806 MDFICQ9P1T7 246 aa10.41□□□□□ -0.74
SMARCA4-202ENST00000413806 HHLA3Q9XRX5 114 aa10.41□□□□□ -0.74
SMARCA4-202ENST00000413806 ENHOQ6UWT2 76 aa10.41□□□□□ -0.74
SMARCA4-202ENST00000413806 TRBV10-1A0A0K0K1A3 114 aa10.41□□□□□ -0.74
SMARCA4-202ENST00000413806 MRPS12O15235 138 aaKnown RBP10.41□□□□□ -0.74
SMARCA4-202ENST00000413806 LMO4P61968 165 aa10.41□□□□□ -0.74
SMARCA4-202ENST00000413806 HRCT1Q6UXD1 115 aa10.41□□□□□ -0.74
SMARCA4-202ENST00000413806 TMEM263Q8WUH6 116 aaKnown RBP10.41□□□□□ -0.74
SMARCA4-202ENST00000413806 TP53TG3Q9ULZ0 132 aa10.41□□□□□ -0.74
SMARCA4-202ENST00000413806 MUC22E2RYF6 1773 aaPredicted RBP10.4□□□□□ -0.74
SMARCA4-202ENST00000413806 IGF1P05019 195 aa10.4□□□□□ -0.74
SMARCA4-202ENST00000413806 COX7CP15954 63 aa10.4□□□□□ -0.74
SMARCA4-202ENST00000413806 IMUPQ9GZP8 106 aa10.4□□□□□ -0.74
SMARCA4-202ENST00000413806 NUP210LQ5VU65 1888 aa10.4□□□□□ -0.74
SMARCA4-202ENST00000413806 IGHV3-30-3P0DP02 117 aa10.4□□□□□ -0.74
SMARCA4-202ENST00000413806 A0A0J9YXY3 114 aa10.39□□□□□ -0.75
SMARCA4-202ENST00000413806 P0DMU3 169 aa10.39□□□□□ -0.75
SMARCA4-202ENST00000413806 FAM231AP0DMU4 169 aa10.39□□□□□ -0.75
SMARCA4-202ENST00000413806 FAM231CP0DMU5 169 aa10.39□□□□□ -0.75
SMARCA4-202ENST00000413806 ABCA4P78363 2273 aa10.39□□□□□ -0.75
SMARCA4-202ENST00000413806 TIMM17BO60830 172 aa10.39□□□□□ -0.75
SMARCA4-202ENST00000413806 DEFB1P60022 68 aa10.39□□□□□ -0.75
SMARCA4-202ENST00000413806 EBI3Q14213 229 aa10.39□□□□□ -0.75
SMARCA4-202ENST00000413806 MIR7-3HGQ8N6C7 128 aa10.39□□□□□ -0.75
SMARCA4-202ENST00000413806 ALPK3Q96L96 1907 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 267.2 ms