RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 Q8N6K4 173 aa8.5□□□□□ -1.05
PTPRF-204ENST00000412568 TET2Q6N021 2002 aaPredicted RBP8.5□□□□□ -1.05
PTPRF-204ENST00000412568 IGHG4P01861 327 aa8.5□□□□□ -1.05
PTPRF-204ENST00000412568 HLA-DRB4P13762 266 aa8.5□□□□□ -1.05
PTPRF-204ENST00000412568 ZFAND3Q9H8U3 227 aa8.5□□□□□ -1.05
PTPRF-204ENST00000412568 HLA-DRB4X5D2U9 266 aa8.5□□□□□ -1.05
PTPRF-204ENST00000412568 CMC4P56277 68 aaPredicted RBP8.5□□□□□ -1.05
PTPRF-204ENST00000412568 C18orf65Q6ZTR6 163 aa8.5□□□□□ -1.05
PTPRF-204ENST00000412568 GATD1Q8NB37 220 aa8.5□□□□□ -1.05
PTPRF-204ENST00000412568 SMR3AQ99954 134 aa8.5□□□□□ -1.05
PTPRF-204ENST00000412568 LENEPQ9Y5L5 61 aa8.5□□□□□ -1.05
PTPRF-204ENST00000412568 TNRC18O15417 2968 aaPredicted RBP8.5□□□□□ -1.05
PTPRF-204ENST00000412568 TRBV25-1A0A075B6N4 114 aa8.49□□□□□ -1.05
PTPRF-204ENST00000412568 TIMM21Q9BVV7 248 aa8.49□□□□□ -1.05
PTPRF-204ENST00000412568 TP73-AS1Q9UF72 201 aa8.49□□□□□ -1.05
PTPRF-204ENST00000412568 TNRC6BQ9UPQ9 1833 aaKnown RBP8.49□□□□□ -1.05
PTPRF-204ENST00000412568 F5H768 121 aa8.49□□□□□ -1.05
PTPRF-204ENST00000412568 FGF6P10767 208 aa8.49□□□□□ -1.05
PTPRF-204ENST00000412568 WFDC2Q14508 124 aa8.49□□□□□ -1.05
PTPRF-204ENST00000412568 MORN3Q6PF18 240 aaPredicted RBP8.49□□□□□ -1.05
PTPRF-204ENST00000412568 C20orf173Q96LM9 149 aa8.49□□□□□ -1.05
PTPRF-204ENST00000412568 HIST1H4AP62805 103 aaKnown RBP8.49□□□□□ -1.05
PTPRF-204ENST00000412568 LINC01545Q5VT33 79 aa8.49□□□□□ -1.05
PTPRF-204ENST00000412568 ADGRG4Q8IZF6 3080 aa8.48□□□□□ -1.05
PTPRF-204ENST00000412568 TRBV20-1A0A075B6N2 111 aa8.48□□□□□ -1.05
PTPRF-204ENST00000412568 TRBV6-1A0A0K0K1D8 114 aa8.48□□□□□ -1.05
PTPRF-204ENST00000412568 RBMY1BA6NDE4 496 aaKnown RBP8.48□□□□□ -1.05
PTPRF-204ENST00000412568 RBMY1EA6NEQ0 496 aaKnown RBP8.48□□□□□ -1.05
PTPRF-204ENST00000412568 DEFB4AO15263 64 aa8.48□□□□□ -1.05
PTPRF-204ENST00000412568 RBMY1DP0C7P1 496 aaKnown RBP8.48□□□□□ -1.05
PTPRF-204ENST00000412568 RBMY1A1P0DJD3 496 aaKnown RBP8.48□□□□□ -1.05
PTPRF-204ENST00000412568 RBMY1CP0DJD4 496 aa8.48□□□□□ -1.05
PTPRF-204ENST00000412568 EDN2P20800 178 aa8.48□□□□□ -1.05
PTPRF-204ENST00000412568 Q6YL49 198 aa8.48□□□□□ -1.05
PTPRF-204ENST00000412568 C9orf47Q6ZRZ4 202 aa8.48□□□□□ -1.05
PTPRF-204ENST00000412568 EDA2RQ9HAV5 297 aa8.48□□□□□ -1.05
PTPRF-204ENST00000412568 VWC2LB2RUY7 222 aa8.48□□□□□ -1.05
PTPRF-204ENST00000412568 PAX4O43316 350 aa8.48□□□□□ -1.05
PTPRF-204ENST00000412568 CTRLP40313 264 aa8.48□□□□□ -1.05
PTPRF-204ENST00000412568 FXYD2P54710 66 aa8.48□□□□□ -1.05
PTPRF-204ENST00000412568 INAFM1C9JVW0 142 aa8.47□□□□□ -1.05
PTPRF-204ENST00000412568 IGLV2-11P01706 119 aa8.47□□□□□ -1.05
PTPRF-204ENST00000412568 MALP21145 153 aa8.47□□□□□ -1.05
PTPRF-204ENST00000412568 Q6ZQT7 251 aa8.47□□□□□ -1.05
PTPRF-204ENST00000412568 ATMQ13315 3056 aa8.47□□□□□ -1.05
PTPRF-204ENST00000412568 A0A0J9YY99 117 aa8.47□□□□□ -1.05
PTPRF-204ENST00000412568 SIVA1O15304 175 aa8.47□□□□□ -1.05
PTPRF-204ENST00000412568 PRIMA1Q86XR5 153 aa8.47□□□□□ -1.05
PTPRF-204ENST00000412568 I3L3M4 83 aa8.47□□□□□ -1.05
PTPRF-204ENST00000412568 K7EMT4 169 aa8.47□□□□□ -1.05
PTPRF-204ENST00000412568 GAGE6Q13070 117 aa8.47□□□□□ -1.05
PTPRF-204ENST00000412568 PMVKQ15126 192 aa8.47□□□□□ -1.05
PTPRF-204ENST00000412568 SCRT2Q9NQ03 307 aa8.47□□□□□ -1.05
PTPRF-204ENST00000412568 PRO1854Q9UHT4 67 aa8.47□□□□□ -1.05
PTPRF-204ENST00000412568 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.46□□□□□ -1.05
PTPRF-204ENST00000412568 IGKV2-29A2NJV5 120 aaPredicted RBP8.46□□□□□ -1.05
PTPRF-204ENST00000412568 B5MCH6 92 aa8.46□□□□□ -1.05
PTPRF-204ENST00000412568 PRM2P04554 102 aa8.46□□□□□ -1.05
PTPRF-204ENST00000412568 CLPSL2Q6UWE3 100 aa8.46□□□□□ -1.05
PTPRF-204ENST00000412568 C20orf78Q9BR46 151 aa8.46□□□□□ -1.05
PTPRF-204ENST00000412568 CFAP47Q6ZTR5 3102 aa8.46□□□□□ -1.05
PTPRF-204ENST00000412568 PRSS29PA6NIE9 313 aa8.46□□□□□ -1.06
PTPRF-204ENST00000412568 RPL39P62891 51 aaKnown RBP8.46□□□□□ -1.06
PTPRF-204ENST00000412568 Q6ZSV7 163 aa8.46□□□□□ -1.06
PTPRF-204ENST00000412568 HELZ2Q9BYK8 2649 aaKnown RBP8.46□□□□□ -1.06
PTPRF-204ENST00000412568 RHODO00212 210 aa8.46□□□□□ -1.06
PTPRF-204ENST00000412568 SLC25A20O43772 301 aa8.46□□□□□ -1.06
PTPRF-204ENST00000412568 SUMO4Q6EEV6 95 aa8.46□□□□□ -1.06
PTPRF-204ENST00000412568 NTN5Q8WTR8 489 aaPredicted RBP8.46□□□□□ -1.06
PTPRF-204ENST00000412568 A0A0J9YX75 114 aa8.45□□□□□ -1.06
PTPRF-204ENST00000412568 H3BMM0 161 aa8.45□□□□□ -1.06
PTPRF-204ENST00000412568 LINC00310P59036 64 aa8.45□□□□□ -1.06
PTPRF-204ENST00000412568 GAGE2AQ6NT46 116 aa8.45□□□□□ -1.06
PTPRF-204ENST00000412568 MRAPQ8TCY5 172 aa8.45□□□□□ -1.06
PTPRF-204ENST00000412568 UBE2WQ96B02 151 aa8.45□□□□□ -1.06
PTPRF-204ENST00000412568 DPH3Q96FX2 82 aa8.45□□□□□ -1.06
PTPRF-204ENST00000412568 FLNAP21333 2647 aaKnown RBP8.45□□□□□ -1.06
PTPRF-204ENST00000412568 ZZEF1O43149 2961 aa8.45□□□□□ -1.06
PTPRF-204ENST00000412568 CRPP02741 224 aa8.45□□□□□ -1.06
PTPRF-204ENST00000412568 IGLL5B9A064 214 aa8.45□□□□□ -1.06
PTPRF-204ENST00000412568 DAD1P61803 113 aa8.45□□□□□ -1.06
PTPRF-204ENST00000412568 C9orf153Q5TBE3 101 aa8.45□□□□□ -1.06
PTPRF-204ENST00000412568 ATRQ13535 2644 aa8.44□□□□□ -1.06
PTPRF-204ENST00000412568 CFAP161Q6P656 301 aa8.44□□□□□ -1.06
PTPRF-204ENST00000412568 ZNF493Q6ZR52 646 aa8.44□□□□□ -1.06
PTPRF-204ENST00000412568 ITPR3Q14573 2671 aa8.44□□□□□ -1.06
PTPRF-204ENST00000412568 TAL2Q16559 108 aa8.43□□□□□ -1.06
PTPRF-204ENST00000412568 J3QQQ9 107 aa8.43□□□□□ -1.06
PTPRF-204ENST00000412568 DMXL1Q9Y485 3027 aa8.43□□□□□ -1.06
PTPRF-204ENST00000412568 IGLC6P0CF74 106 aa8.43□□□□□ -1.06
PTPRF-204ENST00000412568 P0DMU3 169 aa8.43□□□□□ -1.06
PTPRF-204ENST00000412568 FAM231AP0DMU4 169 aa8.43□□□□□ -1.06
PTPRF-204ENST00000412568 FAM231CP0DMU5 169 aa8.43□□□□□ -1.06
PTPRF-204ENST00000412568 TMEM86BQ8N661 226 aa8.43□□□□□ -1.06
PTPRF-204ENST00000412568 AGRNO00468 2067 aa8.43□□□□□ -1.06
PTPRF-204ENST00000412568 LOC400499M0QZD8 3231 aa8.42□□□□□ -1.06
PTPRF-204ENST00000412568 MGAM2Q2M2H8 2515 aa8.42□□□□□ -1.06
PTPRF-204ENST00000412568 C6orf226Q5I0X4 101 aa8.42□□□□□ -1.06
PTPRF-204ENST00000412568 RASL10AQ92737 203 aa8.42□□□□□ -1.06
PTPRF-204ENST00000412568 SS18L2Q9UHA2 77 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms