RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 GTSCR1Q86UQ5 136 aa17.9■□□□□ 0.46
VRK2-202ENST00000412104 C11orf72Q8NBR9 251 aa17.9■□□□□ 0.46
VRK2-202ENST00000412104 TP53TG1Q9Y2A0 90 aa17.9■□□□□ 0.46
VRK2-202ENST00000412104 HECTD1Q9ULT8 2610 aa17.9■□□□□ 0.46
VRK2-202ENST00000412104 NSUN5P1Q3KNT7 163 aa17.9■□□□□ 0.46
VRK2-202ENST00000412104 XCL2Q9UBD3 114 aa17.9■□□□□ 0.46
VRK2-202ENST00000412104 CHTOPQ9Y3Y2 248 aaKnown RBP17.89■□□□□ 0.45
VRK2-202ENST00000412104 HIVEP2P31629 2446 aa17.89■□□□□ 0.45
VRK2-202ENST00000412104 RIPPLY3P57055 190 aa17.88■□□□□ 0.45
VRK2-202ENST00000412104 PIK3CD-AS1Q5SR53 167 aa17.88■□□□□ 0.45
VRK2-202ENST00000412104 LINC01549A6NIU2 74 aa17.88■□□□□ 0.45
VRK2-202ENST00000412104 A8MWV9 139 aa17.87■□□□□ 0.45
VRK2-202ENST00000412104 PTH2Q96A98 100 aa17.87■□□□□ 0.45
VRK2-202ENST00000412104 EDA2RQ9HAV5 297 aa17.87■□□□□ 0.45
VRK2-202ENST00000412104 IGHV3-73A0A0B4J1V6 119 aa17.86■□□□□ 0.45
VRK2-202ENST00000412104 SIVA1O15304 175 aa17.86■□□□□ 0.45
VRK2-202ENST00000412104 RPL39P62891 51 aaKnown RBP17.86■□□□□ 0.45
VRK2-202ENST00000412104 UFSP1Q6NVU6 142 aa17.86■□□□□ 0.45
VRK2-202ENST00000412104 TMEM208Q9BTX3 173 aa17.86■□□□□ 0.45
VRK2-202ENST00000412104 SETD2Q9BYW2 2564 aaPredicted RBP17.86■□□□□ 0.45
VRK2-202ENST00000412104 IGIPA6NJ69 53 aa17.85■□□□□ 0.45
VRK2-202ENST00000412104 TSHBP01222 138 aa17.85■□□□□ 0.45
VRK2-202ENST00000412104 IGLV1-51P01701 117 aa17.85■□□□□ 0.45
VRK2-202ENST00000412104 PRSS29PA6NIE9 313 aa17.84■□□□□ 0.45
VRK2-202ENST00000412104 TTTY13Q9BZ97 58 aa17.84■□□□□ 0.45
VRK2-202ENST00000412104 NACAE9PAV3 2078 aa17.84■□□□□ 0.45
VRK2-202ENST00000412104 RHOHQ15669 191 aa17.84■□□□□ 0.45
VRK2-202ENST00000412104 C1orf158Q8N1D5 194 aa17.84■□□□□ 0.45
VRK2-202ENST00000412104 SPXQ9BT56 116 aa17.84■□□□□ 0.45
VRK2-202ENST00000412104 TMEM97Q5BJF2 176 aa17.83■□□□□ 0.44
VRK2-202ENST00000412104 Q6ZVH6 145 aa17.83■□□□□ 0.44
VRK2-202ENST00000412104 CMC4P56277 68 aaPredicted RBP17.82■□□□□ 0.44
VRK2-202ENST00000412104 KRTAP10-3P60369 221 aa17.82■□□□□ 0.44
VRK2-202ENST00000412104 CFAP126Q5VTH2 177 aa17.82■□□□□ 0.44
VRK2-202ENST00000412104 TIMM17AQ99595 171 aa17.82■□□□□ 0.44
VRK2-202ENST00000412104 I3L3M4 83 aa17.82■□□□□ 0.44
VRK2-202ENST00000412104 TMEM141Q96I45 108 aa17.82■□□□□ 0.44
VRK2-202ENST00000412104 MRPL16Q9NX20 251 aaKnown RBP17.82■□□□□ 0.44
VRK2-202ENST00000412104 P0DMU3 169 aa17.81■□□□□ 0.44
VRK2-202ENST00000412104 FAM231AP0DMU4 169 aa17.81■□□□□ 0.44
VRK2-202ENST00000412104 FAM231CP0DMU5 169 aa17.81■□□□□ 0.44
VRK2-202ENST00000412104 AZU1P20160 251 aa17.81■□□□□ 0.44
VRK2-202ENST00000412104 COX11Q9Y6N1 276 aa17.81■□□□□ 0.44
VRK2-202ENST00000412104 IGHV3OR16-12A0A075B7B8 117 aa17.8■□□□□ 0.44
VRK2-202ENST00000412104 BEAN1Q3B7T3 259 aa17.8■□□□□ 0.44
VRK2-202ENST00000412104 NDUFA11Q86Y39 141 aa17.8■□□□□ 0.44
VRK2-202ENST00000412104 INAFM1C9JVW0 142 aa17.79■□□□□ 0.44
VRK2-202ENST00000412104 HSD52Q0P140 79 aa17.79■□□□□ 0.44
VRK2-202ENST00000412104 GAGE1Q13065 139 aa17.79■□□□□ 0.44
VRK2-202ENST00000412104 ORAOV1Q8WV07 137 aa17.78■□□□□ 0.44
VRK2-202ENST00000412104 FAM110AQ9BQ89 295 aa17.78■□□□□ 0.44
VRK2-202ENST00000412104 WFDC10AQ9H1F0 79 aa17.78■□□□□ 0.44
VRK2-202ENST00000412104 RHODO00212 210 aa17.78■□□□□ 0.44
VRK2-202ENST00000412104 PMVKQ15126 192 aa17.78■□□□□ 0.44
VRK2-202ENST00000412104 SETXQ7Z333 2677 aaKnown RBP17.78■□□□□ 0.44
VRK2-202ENST00000412104 Q6ZSN1 163 aa17.77■□□□□ 0.44
VRK2-202ENST00000412104 IL17DQ8TAD2 202 aa17.77■□□□□ 0.44
VRK2-202ENST00000412104 C19orf73Q9NVV2 129 aa17.77■□□□□ 0.44
VRK2-202ENST00000412104 OTOGQ6ZRI0 2925 aa17.77■□□□□ 0.43
VRK2-202ENST00000412104 TAX1BP3O14907 124 aa17.76■□□□□ 0.43
VRK2-202ENST00000412104 HIGD1BQ9P298 99 aa17.76■□□□□ 0.43
VRK2-202ENST00000412104 TRAV8-6A0A0B4J262 113 aa17.76■□□□□ 0.43
VRK2-202ENST00000412104 RS1O15537 224 aa17.76■□□□□ 0.43
VRK2-202ENST00000412104 SEC11AP67812 179 aa17.76■□□□□ 0.43
VRK2-202ENST00000412104 C20orf203Q8NBC4 194 aa17.76■□□□□ 0.43
VRK2-202ENST00000412104 CST9LQ9H4G1 147 aa17.76■□□□□ 0.43
VRK2-202ENST00000412104 IGLV4-69A0A075B6H9 119 aa17.75■□□□□ 0.43
VRK2-202ENST00000412104 RNASE8Q8TDE3 154 aaKnown RBP17.75■□□□□ 0.43
VRK2-202ENST00000412104 TNFRSF18Q9Y5U5 241 aa17.75■□□□□ 0.43
VRK2-202ENST00000412104 TRBV25-1A0A075B6N4 114 aa17.74■□□□□ 0.43
VRK2-202ENST00000412104 MAPKAPK5-AS1Q8N8E1 139 aa17.74■□□□□ 0.43
VRK2-202ENST00000412104 GIG44P09565 113 aaPredicted RBP17.74■□□□□ 0.43
VRK2-202ENST00000412104 NPSP0C0P6 89 aa17.73■□□□□ 0.43
VRK2-202ENST00000412104 CHAC1Q9BUX1 264 aa17.73■□□□□ 0.43
VRK2-202ENST00000412104 Q9UF83 564 aa17.73■□□□□ 0.43
VRK2-202ENST00000412104 IGHV3-53P01767 116 aa17.72■□□□□ 0.43
VRK2-202ENST00000412104 PF4P02776 101 aa17.72■□□□□ 0.43
VRK2-202ENST00000412104 C11orf86A6NJI1 115 aa17.72■□□□□ 0.43
VRK2-202ENST00000412104 RPL35AP18077 110 aaKnown RBP17.71■□□□□ 0.43
VRK2-202ENST00000412104 EMP1P54849 157 aa17.71■□□□□ 0.43
VRK2-202ENST00000412104 OR11H2Q8NH07 326 aa17.71■□□□□ 0.43
VRK2-202ENST00000412104 TMEM263Q8WUH6 116 aaKnown RBP17.71■□□□□ 0.43
VRK2-202ENST00000412104 NOTCH2Q04721 2471 aa17.71■□□□□ 0.42
VRK2-202ENST00000412104 E9PLD3 99 aa17.7■□□□□ 0.42
VRK2-202ENST00000412104 PAPPA-AS1Q5QFB9 102 aa17.7■□□□□ 0.42
VRK2-202ENST00000412104 LINC00482Q8N8I6 264 aa17.7■□□□□ 0.42
VRK2-202ENST00000412104 OPRPNQ99935 248 aaPredicted RBP17.7■□□□□ 0.42
VRK2-202ENST00000412104 TRGV1A0A0A0MS02 117 aa17.7■□□□□ 0.42
VRK2-202ENST00000412104 NIPBLQ6KC79 2804 aaeCLIP17.69■□□□□ 0.42
VRK2-202ENST00000412104 A6NDN8 102 aa17.68■□□□□ 0.42
VRK2-202ENST00000412104 DNAJC30Q96LL9 226 aa17.68■□□□□ 0.42
VRK2-202ENST00000412104 PRADC1Q9BSG0 188 aa17.68■□□□□ 0.42
VRK2-202ENST00000412104 OR4C5Q8NGB2 326 aa17.66■□□□□ 0.42
VRK2-202ENST00000412104 Q6ZTI0 123 aa17.66■□□□□ 0.42
VRK2-202ENST00000412104 IGLV4-3A0A075B6K6 122 aa17.65■□□□□ 0.42
VRK2-202ENST00000412104 MYMXA0A1B0GTQ4 84 aa17.65■□□□□ 0.42
VRK2-202ENST00000412104 ZNRF2Q8NHG8 242 aa17.65■□□□□ 0.42
VRK2-202ENST00000412104 C1QTNF4Q9BXJ3 329 aa17.65■□□□□ 0.42
VRK2-202ENST00000412104 JMJD1CQ15652 2540 aa17.65■□□□□ 0.42
VRK2-202ENST00000412104 GCSHP23434 173 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms