RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 M0QY20 66 aa9.97□□□□□ -0.81
LIMS1-205ENST00000410093 RHODO00212 210 aa9.97□□□□□ -0.81
LIMS1-205ENST00000410093 CD28P10747 220 aa9.97□□□□□ -0.81
LIMS1-205ENST00000410093 ZNF56Q15929 161 aa9.97□□□□□ -0.81
LIMS1-205ENST00000410093 TMEM97Q5BJF2 176 aa9.97□□□□□ -0.81
LIMS1-205ENST00000410093 TIMM17AQ99595 171 aa9.97□□□□□ -0.81
LIMS1-205ENST00000410093 SDHAF1A6NFY7 115 aa9.97□□□□□ -0.81
LIMS1-205ENST00000410093 OR11H12B2RN74 326 aa9.97□□□□□ -0.81
LIMS1-205ENST00000410093 BVES-AS1Q5T3Y7 98 aa9.97□□□□□ -0.81
LIMS1-205ENST00000410093 NEXN-AS1Q8NBZ9 246 aa9.97□□□□□ -0.81
LIMS1-205ENST00000410093 DUX3Q96PT4 197 aa9.97□□□□□ -0.81
LIMS1-205ENST00000410093 STAB1Q9NY15 2570 aa9.96□□□□□ -0.81
LIMS1-205ENST00000410093 A0A087WWL8 130 aa9.96□□□□□ -0.82
LIMS1-205ENST00000410093 NPSP0C0P6 89 aa9.96□□□□□ -0.82
LIMS1-205ENST00000410093 HSD52Q0P140 79 aa9.96□□□□□ -0.82
LIMS1-205ENST00000410093 NSUN5P1Q3KNT7 163 aa9.96□□□□□ -0.82
LIMS1-205ENST00000410093 MPV17L2Q567V2 206 aa9.96□□□□□ -0.82
LIMS1-205ENST00000410093 ZFP2Q6ZN57 461 aa9.96□□□□□ -0.82
LIMS1-205ENST00000410093 C2orf91Q6ZV80 131 aa9.96□□□□□ -0.82
LIMS1-205ENST00000410093 STHQ8IWL8 128 aa9.96□□□□□ -0.82
LIMS1-205ENST00000410093 C3orf56Q8N813 242 aa9.96□□□□□ -0.82
LIMS1-205ENST00000410093 CITED2Q99967 270 aaPredicted RBP9.96□□□□□ -0.82
LIMS1-205ENST00000410093 MRPL35Q9NZE8 188 aaKnown RBP9.96□□□□□ -0.82
LIMS1-205ENST00000410093 CHTOPQ9Y3Y2 248 aaKnown RBP9.96□□□□□ -0.82
LIMS1-205ENST00000410093 AGRNO00468 2067 aa9.95□□□□□ -0.82
LIMS1-205ENST00000410093 SPRY2O43597 315 aa9.95□□□□□ -0.82
LIMS1-205ENST00000410093 ZNF25P17030 456 aaPredicted RBP9.95□□□□□ -0.82
LIMS1-205ENST00000410093 ZC2HC1BQ5TFG8 222 aa9.95□□□□□ -0.82
LIMS1-205ENST00000410093 FAM74A4Q5TZK3 123 aa9.95□□□□□ -0.82
LIMS1-205ENST00000410093 RBMY1BA6NDE4 496 aaKnown RBP9.94□□□□□ -0.82
LIMS1-205ENST00000410093 A6NDN8 102 aa9.94□□□□□ -0.82
LIMS1-205ENST00000410093 RBMY1EA6NEQ0 496 aaKnown RBP9.94□□□□□ -0.82
LIMS1-205ENST00000410093 I3L3M4 83 aa9.94□□□□□ -0.82
LIMS1-205ENST00000410093 RBMY1DP0C7P1 496 aaKnown RBP9.94□□□□□ -0.82
LIMS1-205ENST00000410093 NMUP48645 174 aa9.94□□□□□ -0.82
LIMS1-205ENST00000410093 BAALCQ8WXS3 180 aa9.94□□□□□ -0.82
LIMS1-205ENST00000410093 DNAJC30Q96LL9 226 aa9.94□□□□□ -0.82
LIMS1-205ENST00000410093 LINC01587Q99440 93 aa9.94□□□□□ -0.82
LIMS1-205ENST00000410093 JPT2Q9H910 190 aa9.94□□□□□ -0.82
LIMS1-205ENST00000410093 COX11Q9Y6N1 276 aa9.94□□□□□ -0.82
LIMS1-205ENST00000410093 RBMY1A1P0DJD3 496 aaKnown RBP9.93□□□□□ -0.82
LIMS1-205ENST00000410093 RBMY1CP0DJD4 496 aa9.93□□□□□ -0.82
LIMS1-205ENST00000410093 RBMY1FQ15415 496 aaKnown RBP9.93□□□□□ -0.82
LIMS1-205ENST00000410093 BEAN1Q3B7T3 259 aa9.93□□□□□ -0.82
LIMS1-205ENST00000410093 ODF3L2Q3SX64 289 aa9.93□□□□□ -0.82
LIMS1-205ENST00000410093 TMEM208Q9BTX3 173 aa9.93□□□□□ -0.82
LIMS1-205ENST00000410093 IGIPA6NJ69 53 aa9.92□□□□□ -0.82
LIMS1-205ENST00000410093 PROK1P58294 105 aa9.92□□□□□ -0.82
LIMS1-205ENST00000410093 PMVKQ15126 192 aa9.92□□□□□ -0.82
LIMS1-205ENST00000410093 CRYBA4P53673 196 aa9.92□□□□□ -0.82
LIMS1-205ENST00000410093 TAL2Q16559 108 aa9.92□□□□□ -0.82
LIMS1-205ENST00000410093 NDUFA11Q86Y39 141 aa9.92□□□□□ -0.82
LIMS1-205ENST00000410093 KRTAP3-3Q9BYR6 98 aa9.92□□□□□ -0.82
LIMS1-205ENST00000410093 KRTAP3-2Q9BYR7 98 aa9.92□□□□□ -0.82
LIMS1-205ENST00000410093 TP53TG1Q9Y2A0 90 aa9.92□□□□□ -0.82
LIMS1-205ENST00000410093 A0A1W2PRX2 142 aa9.91□□□□□ -0.82
LIMS1-205ENST00000410093 IGLV1-51P01701 117 aa9.91□□□□□ -0.82
LIMS1-205ENST00000410093 UFSP1Q6NVU6 142 aa9.91□□□□□ -0.82
LIMS1-205ENST00000410093 C11orf72Q8NBR9 251 aa9.91□□□□□ -0.82
LIMS1-205ENST00000410093 C1QTNF4Q9BXJ3 329 aa9.91□□□□□ -0.82
LIMS1-205ENST00000410093 PRSS29PA6NIE9 313 aa9.9□□□□□ -0.82
LIMS1-205ENST00000410093 CIDEAO60543 219 aa9.9□□□□□ -0.82
LIMS1-205ENST00000410093 HERVK_113P61574 105 aa9.9□□□□□ -0.82
LIMS1-205ENST00000410093 MORN3Q6PF18 240 aaPredicted RBP9.9□□□□□ -0.82
LIMS1-205ENST00000410093 E9PLD3 99 aa9.89□□□□□ -0.83
LIMS1-205ENST00000410093 SAP30O75446 220 aa9.89□□□□□ -0.83
LIMS1-205ENST00000410093 GTSCR1Q86UQ5 136 aa9.89□□□□□ -0.83
LIMS1-205ENST00000410093 PCP2Q8IVA1 136 aa9.89□□□□□ -0.83
LIMS1-205ENST00000410093 OR11H2Q8NH07 326 aa9.89□□□□□ -0.83
LIMS1-205ENST00000410093 PYGO1Q9Y3Y4 419 aa9.89□□□□□ -0.83
LIMS1-205ENST00000410093 TNFRSF18Q9Y5U5 241 aa9.89□□□□□ -0.83
LIMS1-205ENST00000410093 SORL1Q92673 2214 aa9.89□□□□□ -0.83
LIMS1-205ENST00000410093 ANK2Q01484 3957 aa9.89□□□□□ -0.83
LIMS1-205ENST00000410093 RS1O15537 224 aa9.88□□□□□ -0.83
LIMS1-205ENST00000410093 IGHV3-53P01767 116 aa9.88□□□□□ -0.83
LIMS1-205ENST00000410093 C20orf203Q8NBC4 194 aa9.88□□□□□ -0.83
LIMS1-205ENST00000410093 CST9LQ9H4G1 147 aa9.88□□□□□ -0.83
LIMS1-205ENST00000410093 TSHBP01222 138 aa9.87□□□□□ -0.83
LIMS1-205ENST00000410093 HTN1P15515 57 aa9.87□□□□□ -0.83
LIMS1-205ENST00000410093 ZNF124Q15973 351 aa9.87□□□□□ -0.83
LIMS1-205ENST00000410093 CFAP126Q5VTH2 177 aa9.87□□□□□ -0.83
LIMS1-205ENST00000410093 C11orf44Q8N8P7 122 aa9.87□□□□□ -0.83
LIMS1-205ENST00000410093 IGKV2D-26A0A0A0MRZ7 120 aa9.87□□□□□ -0.83
LIMS1-205ENST00000410093 ADARB2-AS1A8MUL3 147 aa9.87□□□□□ -0.83
LIMS1-205ENST00000410093 H3BRM9 83 aa9.87□□□□□ -0.83
LIMS1-205ENST00000410093 IL17DQ8TAD2 202 aa9.87□□□□□ -0.83
LIMS1-205ENST00000410093 TMEM263Q8WUH6 116 aaKnown RBP9.87□□□□□ -0.83
LIMS1-205ENST00000410093 TRBV25-1A0A075B6N4 114 aa9.86□□□□□ -0.83
LIMS1-205ENST00000410093 C11orf86A6NJI1 115 aa9.86□□□□□ -0.83
LIMS1-205ENST00000410093 TAX1BP3O14907 124 aa9.86□□□□□ -0.83
LIMS1-205ENST00000410093 INSL3P51460 131 aa9.86□□□□□ -0.83
LIMS1-205ENST00000410093 SHISA2Q6UWI4 295 aa9.86□□□□□ -0.83
LIMS1-205ENST00000410093 TRBV10-1A0A0K0K1A3 114 aa9.85□□□□□ -0.83
LIMS1-205ENST00000410093 UBE2V1Q13404 147 aa9.85□□□□□ -0.83
LIMS1-205ENST00000410093 NEGR1Q7Z3B1 354 aa9.85□□□□□ -0.83
LIMS1-205ENST00000410093 NFE4Q86UQ8 179 aa9.85□□□□□ -0.83
LIMS1-205ENST00000410093 C1orf158Q8N1D5 194 aa9.85□□□□□ -0.83
LIMS1-205ENST00000410093 CHAC1Q9BUX1 264 aa9.85□□□□□ -0.83
LIMS1-205ENST00000410093 TM2D2Q9BX73 214 aa9.85□□□□□ -0.83
LIMS1-205ENST00000410093 XCL2Q9UBD3 114 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms