RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 PSMB8P28062 276 aa11.27□□□□□ -0.61
LYSMD4-204ENST00000409796 UBE2D1P51668 147 aa11.27□□□□□ -0.61
LYSMD4-204ENST00000409796 TRBV27A0A0K0K1C4 114 aa11.26□□□□□ -0.61
LYSMD4-204ENST00000409796 A6NJY4 79 aa11.26□□□□□ -0.61
LYSMD4-204ENST00000409796 TSPEAR-AS2P59090 65 aa11.26□□□□□ -0.61
LYSMD4-204ENST00000409796 DLX4Q92988 240 aaPredicted RBP11.26□□□□□ -0.61
LYSMD4-204ENST00000409796 ZNF256Q9Y2P7 627 aaPredicted RBP11.26□□□□□ -0.61
LYSMD4-204ENST00000409796 SFTA2Q6UW10 78 aa11.26□□□□□ -0.61
LYSMD4-204ENST00000409796 A0A0J9YX75 114 aa11.25□□□□□ -0.61
LYSMD4-204ENST00000409796 A0A0J9YY99 117 aa11.25□□□□□ -0.61
LYSMD4-204ENST00000409796 TRBV6-5A0A0K0K1A5 114 aa11.25□□□□□ -0.61
LYSMD4-204ENST00000409796 TMEM170BQ5T4T1 132 aa11.25□□□□□ -0.61
LYSMD4-204ENST00000409796 ZNRF2Q8NHG8 242 aa11.25□□□□□ -0.61
LYSMD4-204ENST00000409796 ZNF56Q15929 161 aa11.25□□□□□ -0.61
LYSMD4-204ENST00000409796 Q8N1Y9 231 aa11.25□□□□□ -0.61
LYSMD4-204ENST00000409796 SORL1Q92673 2214 aa11.24□□□□□ -0.61
LYSMD4-204ENST00000409796 IGHV4-59P01825 116 aa11.24□□□□□ -0.61
LYSMD4-204ENST00000409796 ODF3Q96PU9 254 aa11.24□□□□□ -0.61
LYSMD4-204ENST00000409796 PSMB2P49721 201 aa11.24□□□□□ -0.61
LYSMD4-204ENST00000409796 ZNF876PQ49A33 203 aa11.24□□□□□ -0.61
LYSMD4-204ENST00000409796 CELSR2Q9HCU4 2923 aa11.24□□□□□ -0.61
LYSMD4-204ENST00000409796 M0QY20 66 aa11.23□□□□□ -0.61
LYSMD4-204ENST00000409796 OPRPNQ99935 248 aaPredicted RBP11.23□□□□□ -0.61
LYSMD4-204ENST00000409796 ZNF580Q9UK33 172 aa11.23□□□□□ -0.61
LYSMD4-204ENST00000409796 B4DSR2 109 aa11.23□□□□□ -0.61
LYSMD4-204ENST00000409796 K7EQG2 157 aa11.23□□□□□ -0.61
LYSMD4-204ENST00000409796 SPINK13Q1W4C9 94 aa11.23□□□□□ -0.61
LYSMD4-204ENST00000409796 DEFB112Q30KQ8 113 aa11.23□□□□□ -0.61
LYSMD4-204ENST00000409796 SNRPD3P62318 126 aaKnown RBP11.22□□□□□ -0.61
LYSMD4-204ENST00000409796 ANAPC13Q9BS18 74 aa11.22□□□□□ -0.61
LYSMD4-204ENST00000409796 DOPEY2Q9Y3R5 2298 aa11.22□□□□□ -0.61
LYSMD4-204ENST00000409796 IGHV1OR15-1A0A075B7D0 117 aa11.22□□□□□ -0.61
LYSMD4-204ENST00000409796 PPDPFLQ8WWR9 84 aa11.22□□□□□ -0.61
LYSMD4-204ENST00000409796 LOC107984156A0A0G2JMH3 177 aa11.22□□□□□ -0.61
LYSMD4-204ENST00000409796 ARL17AQ8IVW1 177 aa11.22□□□□□ -0.61
LYSMD4-204ENST00000409796 HECTD1Q9ULT8 2610 aa11.21□□□□□ -0.61
LYSMD4-204ENST00000409796 CRYBG3Q68DQ2 2970 aa11.21□□□□□ -0.61
LYSMD4-204ENST00000409796 TEN1Q86WV5 123 aa11.21□□□□□ -0.61
LYSMD4-204ENST00000409796 AMELXQ99217 191 aa11.21□□□□□ -0.61
LYSMD4-204ENST00000409796 IGHV3-30P01768 117 aa11.21□□□□□ -0.62
LYSMD4-204ENST00000409796 P0DMU3 169 aa11.21□□□□□ -0.62
LYSMD4-204ENST00000409796 FAM231AP0DMU4 169 aa11.21□□□□□ -0.62
LYSMD4-204ENST00000409796 FAM231CP0DMU5 169 aa11.21□□□□□ -0.62
LYSMD4-204ENST00000409796 IGHV3-30-5P0DP03 117 aa11.21□□□□□ -0.62
LYSMD4-204ENST00000409796 SYNJ2BPP57105 145 aa11.21□□□□□ -0.62
LYSMD4-204ENST00000409796 UBE2D3P61077 147 aa11.21□□□□□ -0.62
LYSMD4-204ENST00000409796 UBE2D2P62837 147 aa11.21□□□□□ -0.62
LYSMD4-204ENST00000409796 NSUN5P1Q3KNT7 163 aa11.21□□□□□ -0.62
LYSMD4-204ENST00000409796 NDUFA11Q86Y39 141 aa11.21□□□□□ -0.62
LYSMD4-204ENST00000409796 J3QQQ9 107 aa11.2□□□□□ -0.62
LYSMD4-204ENST00000409796 TRPT1Q86TN4 253 aaKnown RBP11.2□□□□□ -0.62
LYSMD4-204ENST00000409796 SLC25A29Q8N8R3 303 aa11.2□□□□□ -0.62
LYSMD4-204ENST00000409796 RHOHQ15669 191 aa11.2□□□□□ -0.62
LYSMD4-204ENST00000409796 NRGNQ92686 78 aa11.2□□□□□ -0.62
LYSMD4-204ENST00000409796 DUX5Q96PT3 197 aa11.2□□□□□ -0.62
LYSMD4-204ENST00000409796 GAGE5Q13069 117 aa11.19□□□□□ -0.62
LYSMD4-204ENST00000409796 GAGE6Q13070 117 aa11.19□□□□□ -0.62
LYSMD4-204ENST00000409796 CFC1BP0CG36 223 aa11.19□□□□□ -0.62
LYSMD4-204ENST00000409796 CFC1P0CG37 223 aa11.19□□□□□ -0.62
LYSMD4-204ENST00000409796 B5MCH6 92 aa11.18□□□□□ -0.62
LYSMD4-204ENST00000409796 NHLRC4P0CG21 123 aaPredicted RBP11.18□□□□□ -0.62
LYSMD4-204ENST00000409796 LGALS3P17931 250 aaKnown RBP11.18□□□□□ -0.62
LYSMD4-204ENST00000409796 TCL1BO95988 128 aa11.18□□□□□ -0.62
LYSMD4-204ENST00000409796 CFAP161Q6P656 301 aa11.18□□□□□ -0.62
LYSMD4-204ENST00000409796 TMEM89A2RUT3 159 aa11.17□□□□□ -0.62
LYSMD4-204ENST00000409796 ZFAND6Q6FIF0 208 aa11.17□□□□□ -0.62
LYSMD4-204ENST00000409796 C20orf203Q8NBC4 194 aa11.17□□□□□ -0.62
LYSMD4-204ENST00000409796 PTPN13Q12923 2485 aa11.17□□□□□ -0.62
LYSMD4-204ENST00000409796 TMEM223A0PJW6 202 aa11.17□□□□□ -0.62
LYSMD4-204ENST00000409796 CYSRT1A8MQ03 144 aa11.17□□□□□ -0.62
LYSMD4-204ENST00000409796 CITED1Q99966 193 aa11.17□□□□□ -0.62
LYSMD4-204ENST00000409796 I3L3M4 83 aa11.16□□□□□ -0.62
LYSMD4-204ENST00000409796 SBSPONQ8IVN8 264 aa11.16□□□□□ -0.62
LYSMD4-204ENST00000409796 LEPROTO15243 131 aa11.16□□□□□ -0.62
LYSMD4-204ENST00000409796 ZNF22P17026 224 aaPredicted RBP11.16□□□□□ -0.62
LYSMD4-204ENST00000409796 ANKRD29Q8N6D5 301 aa11.16□□□□□ -0.62
LYSMD4-204ENST00000409796 IGHV3-64A0A075B6Q5 118 aa11.15□□□□□ -0.62
LYSMD4-204ENST00000409796 RBMY1A1P0DJD3 496 aaKnown RBP11.15□□□□□ -0.62
LYSMD4-204ENST00000409796 RBMY1CP0DJD4 496 aa11.15□□□□□ -0.62
LYSMD4-204ENST00000409796 RBMY1FQ15415 496 aaKnown RBP11.15□□□□□ -0.62
LYSMD4-204ENST00000409796 TEX29Q8N6K0 151 aa11.15□□□□□ -0.62
LYSMD4-204ENST00000409796 TGFAP01135 160 aa11.15□□□□□ -0.62
LYSMD4-204ENST00000409796 FLNCQ14315 2725 aa11.14□□□□□ -0.63
LYSMD4-204ENST00000409796 IGLV4-3A0A075B6K6 122 aa11.14□□□□□ -0.63
LYSMD4-204ENST00000409796 TRGV11A0A075B6L2 103 aa11.14□□□□□ -0.63
LYSMD4-204ENST00000409796 A0A0J9YXV3 536 aa11.14□□□□□ -0.63
LYSMD4-204ENST00000409796 HOXD3P31249 432 aaPredicted RBP11.14□□□□□ -0.63
LYSMD4-204ENST00000409796 C10orf126Q8N4M7 172 aa11.14□□□□□ -0.63
LYSMD4-204ENST00000409796 VCX2Q9H322 139 aa11.14□□□□□ -0.63
LYSMD4-204ENST00000409796 DOPEY1Q5JWR5 2465 aa11.14□□□□□ -0.63
LYSMD4-204ENST00000409796 A8MWV9 139 aa11.14□□□□□ -0.63
LYSMD4-204ENST00000409796 RHODO00212 210 aa11.14□□□□□ -0.63
LYSMD4-204ENST00000409796 LYRM7Q5U5X0 104 aa11.14□□□□□ -0.63
LYSMD4-204ENST00000409796 LINC01356Q8N9X3 169 aa11.14□□□□□ -0.63
LYSMD4-204ENST00000409796 UBR5O95071 2799 aaPredicted RBP11.14□□□□□ -0.63
LYSMD4-204ENST00000409796 USP9XQ93008 2570 aaPredicted RBP11.13□□□□□ -0.63
LYSMD4-204ENST00000409796 IGHV3-73A0A0B4J1V6 119 aa11.13□□□□□ -0.63
LYSMD4-204ENST00000409796 HTN1P15515 57 aa11.13□□□□□ -0.63
LYSMD4-204ENST00000409796 MAPK1IP1LQ8NDC0 245 aa11.13□□□□□ -0.63
LYSMD4-204ENST00000409796 KNCNA6PVL3 124 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms