RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 RRN3P1Q2M238 152 aa11.27□□□□□ -0.6
SCAMP4-202ENST00000409472 C12orf74Q32Q52 190 aa11.27□□□□□ -0.6
SCAMP4-202ENST00000409472 ZFAND6Q6FIF0 208 aa11.27□□□□□ -0.6
SCAMP4-202ENST00000409472 AMTNQ6UX39 209 aa11.27□□□□□ -0.6
SCAMP4-202ENST00000409472 DEFB104AQ8WTQ1 72 aa11.27□□□□□ -0.6
SCAMP4-202ENST00000409472 B5MCH6 92 aa11.27□□□□□ -0.61
SCAMP4-202ENST00000409472 CD7P09564 240 aa11.27□□□□□ -0.61
SCAMP4-202ENST00000409472 DPH3P1Q9H4G8 78 aa11.27□□□□□ -0.61
SCAMP4-202ENST00000409472 SNRPD3P62318 126 aaKnown RBP11.26□□□□□ -0.61
SCAMP4-202ENST00000409472 FAM159AQ6UWV7 190 aa11.26□□□□□ -0.61
SCAMP4-202ENST00000409472 SMIM2Q9BVW6 85 aa11.26□□□□□ -0.61
SCAMP4-202ENST00000409472 WNK1Q9H4A3 2382 aa11.26□□□□□ -0.61
SCAMP4-202ENST00000409472 ODF1Q14990 250 aa11.26□□□□□ -0.61
SCAMP4-202ENST00000409472 TEX29Q8N6K0 151 aa11.26□□□□□ -0.61
SCAMP4-202ENST00000409472 MDFICQ9P1T7 246 aa11.26□□□□□ -0.61
SCAMP4-202ENST00000409472 NXPH4O95158 308 aa11.25□□□□□ -0.61
SCAMP4-202ENST00000409472 LINC00315P59091 139 aa11.25□□□□□ -0.61
SCAMP4-202ENST00000409472 C11orf44Q8N8P7 122 aa11.25□□□□□ -0.61
SCAMP4-202ENST00000409472 RAX2Q96IS3 184 aa11.25□□□□□ -0.61
SCAMP4-202ENST00000409472 ESM1Q9NQ30 184 aa11.25□□□□□ -0.61
SCAMP4-202ENST00000409472 KIF25-AS1Q9Y6Z4 181 aa11.25□□□□□ -0.61
SCAMP4-202ENST00000409472 A0A087WWL8 130 aa11.25□□□□□ -0.61
SCAMP4-202ENST00000409472 KNCNA6PVL3 124 aa11.25□□□□□ -0.61
SCAMP4-202ENST00000409472 MED14OSP0DP75 135 aa11.25□□□□□ -0.61
SCAMP4-202ENST00000409472 PLA2G2AP14555 144 aa11.25□□□□□ -0.61
SCAMP4-202ENST00000409472 LAGE3Q14657 143 aa11.25□□□□□ -0.61
SCAMP4-202ENST00000409472 FOXC2Q99958 501 aa11.25□□□□□ -0.61
SCAMP4-202ENST00000409472 DNAJC9-AS1A6NH13 148 aa11.24□□□□□ -0.61
SCAMP4-202ENST00000409472 RBMY1A1P0DJD3 496 aaKnown RBP11.24□□□□□ -0.61
SCAMP4-202ENST00000409472 RBMY1CP0DJD4 496 aa11.24□□□□□ -0.61
SCAMP4-202ENST00000409472 SUMO2P61956 95 aaKnown RBP11.24□□□□□ -0.61
SCAMP4-202ENST00000409472 RBMY1FQ15415 496 aaKnown RBP11.24□□□□□ -0.61
SCAMP4-202ENST00000409472 Q6ZSV7 163 aa11.24□□□□□ -0.61
SCAMP4-202ENST00000409472 IGKV2D-26A0A0A0MRZ7 120 aa11.24□□□□□ -0.61
SCAMP4-202ENST00000409472 KRTAP1-1Q07627 177 aa11.24□□□□□ -0.61
SCAMP4-202ENST00000409472 CFAP126Q5VTH2 177 aa11.24□□□□□ -0.61
SCAMP4-202ENST00000409472 SPANXA1Q9NS26 97 aa11.24□□□□□ -0.61
SCAMP4-202ENST00000409472 RPL32P62910 135 aaKnown RBP11.23□□□□□ -0.61
SCAMP4-202ENST00000409472 Q8N1Y9 231 aa11.23□□□□□ -0.61
SCAMP4-202ENST00000409472 PPDPFLQ8WWR9 84 aa11.23□□□□□ -0.61
SCAMP4-202ENST00000409472 DLX4Q92988 240 aaPredicted RBP11.23□□□□□ -0.61
SCAMP4-202ENST00000409472 ZMAT4Q9H898 229 aa11.23□□□□□ -0.61
SCAMP4-202ENST00000409472 IGHV3-16A0A0C4DH30 117 aa11.23□□□□□ -0.61
SCAMP4-202ENST00000409472 IGKCP01834 107 aa11.23□□□□□ -0.61
SCAMP4-202ENST00000409472 PRM2P04554 102 aa11.23□□□□□ -0.61
SCAMP4-202ENST00000409472 PRSS1P07477 247 aa11.23□□□□□ -0.61
SCAMP4-202ENST00000409472 TMEM61Q8N0U2 210 aa11.23□□□□□ -0.61
SCAMP4-202ENST00000409472 KLHL30-AS1Q8NEE0 82 aa11.23□□□□□ -0.61
SCAMP4-202ENST00000409472 TTTY13Q9BZ97 58 aa11.23□□□□□ -0.61
SCAMP4-202ENST00000409472 TMEM262E9PQX1 116 aa11.22□□□□□ -0.61
SCAMP4-202ENST00000409472 LINC01619G3V211 115 aa11.22□□□□□ -0.61
SCAMP4-202ENST00000409472 J3QKU1 62 aa11.22□□□□□ -0.61
SCAMP4-202ENST00000409472 RBMY1BA6NDE4 496 aaKnown RBP11.21□□□□□ -0.61
SCAMP4-202ENST00000409472 RBMY1EA6NEQ0 496 aaKnown RBP11.21□□□□□ -0.61
SCAMP4-202ENST00000409472 RBMY1DP0C7P1 496 aaKnown RBP11.21□□□□□ -0.61
SCAMP4-202ENST00000409472 SMIM20Q8N5G0 67 aa11.21□□□□□ -0.61
SCAMP4-202ENST00000409472 HHLA3Q9XRX5 114 aa11.21□□□□□ -0.61
SCAMP4-202ENST00000409472 TNFRSF18Q9Y5U5 241 aa11.21□□□□□ -0.61
SCAMP4-202ENST00000409472 HECTD1Q9ULT8 2610 aa11.21□□□□□ -0.61
SCAMP4-202ENST00000409472 PRSS29PA6NIE9 313 aa11.21□□□□□ -0.62
SCAMP4-202ENST00000409472 DEFB131AP59861 70 aa11.21□□□□□ -0.62
SCAMP4-202ENST00000409472 C4orf3Q8WVX3 66 aa11.21□□□□□ -0.62
SCAMP4-202ENST00000409472 ODF3Q96PU9 254 aa11.21□□□□□ -0.62
SCAMP4-202ENST00000409472 HIST1H4GQ99525 98 aa11.21□□□□□ -0.62
SCAMP4-202ENST00000409472 SETXQ7Z333 2677 aaKnown RBP11.2□□□□□ -0.62
SCAMP4-202ENST00000409472 GAGE12JA6NER3 117 aa11.2□□□□□ -0.62
SCAMP4-202ENST00000409472 GAGE7O76087 117 aa11.2□□□□□ -0.62
SCAMP4-202ENST00000409472 GAGE12FP0CL80 117 aa11.2□□□□□ -0.62
SCAMP4-202ENST00000409472 GAGE12GP0CL81 117 aa11.2□□□□□ -0.62
SCAMP4-202ENST00000409472 GAGE12IP0CL82 117 aa11.2□□□□□ -0.62
SCAMP4-202ENST00000409472 GAGE4Q13068 117 aa11.2□□□□□ -0.62
SCAMP4-202ENST00000409472 FHL3Q13643 280 aa11.2□□□□□ -0.62
SCAMP4-202ENST00000409472 FAM74A4Q5TZK3 123 aa11.2□□□□□ -0.62
SCAMP4-202ENST00000409472 SUMO4Q6EEV6 95 aa11.2□□□□□ -0.62
SCAMP4-202ENST00000409472 C9orf85Q96MD7 179 aa11.2□□□□□ -0.62
SCAMP4-202ENST00000409472 A0A1W2PRX2 142 aa11.2□□□□□ -0.62
SCAMP4-202ENST00000409472 NFE4Q86UQ8 179 aa11.2□□□□□ -0.62
SCAMP4-202ENST00000409472 MRPL35Q9NZE8 188 aaKnown RBP11.2□□□□□ -0.62
SCAMP4-202ENST00000409472 LYRM7Q5U5X0 104 aa11.19□□□□□ -0.62
SCAMP4-202ENST00000409472 IGHV1OR15-1A0A075B7D0 117 aa11.19□□□□□ -0.62
SCAMP4-202ENST00000409472 DPM2O94777 84 aa11.19□□□□□ -0.62
SCAMP4-202ENST00000409472 TEN1Q86WV5 123 aa11.19□□□□□ -0.62
SCAMP4-202ENST00000409472 POM121L12Q8N7R1 296 aa11.19□□□□□ -0.62
SCAMP4-202ENST00000409472 ATP5LO75964 103 aa11.18□□□□□ -0.62
SCAMP4-202ENST00000409472 HTN1P15515 57 aa11.18□□□□□ -0.62
SCAMP4-202ENST00000409472 ZC2HC1BQ5TFG8 222 aa11.18□□□□□ -0.62
SCAMP4-202ENST00000409472 GTSCR1Q86UQ5 136 aa11.18□□□□□ -0.62
SCAMP4-202ENST00000409472 JMJD1CQ15652 2540 aa11.17□□□□□ -0.62
SCAMP4-202ENST00000409472 K7EMI3 77 aa11.17□□□□□ -0.62
SCAMP4-202ENST00000409472 TMEM160Q9NX00 188 aa11.17□□□□□ -0.62
SCAMP4-202ENST00000409472 F5H697 171 aa11.17□□□□□ -0.62
SCAMP4-202ENST00000409472 SMCPP49901 116 aaPredicted RBP11.17□□□□□ -0.62
SCAMP4-202ENST00000409472 MORN3Q6PF18 240 aaPredicted RBP11.16□□□□□ -0.62
SCAMP4-202ENST00000409472 CITED1Q99966 193 aa11.16□□□□□ -0.62
SCAMP4-202ENST00000409472 RHODO00212 210 aa11.16□□□□□ -0.62
SCAMP4-202ENST00000409472 DUSP14O95147 198 aaKnown RBP11.16□□□□□ -0.62
SCAMP4-202ENST00000409472 NHLRC4P0CG21 123 aaPredicted RBP11.16□□□□□ -0.62
SCAMP4-202ENST00000409472 CD28P10747 220 aa11.16□□□□□ -0.62
SCAMP4-202ENST00000409472 C2orf66Q6UXQ4 117 aa11.16□□□□□ -0.62
SCAMP4-202ENST00000409472 TOMM6Q96B49 74 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms