RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 IGHV3-73A0A0B4J1V6 119 aa6.89□□□□□ -1.31
PSEN1-205ENST00000406768 LHBP01229 141 aa6.89□□□□□ -1.31
PSEN1-205ENST00000406768 EBI3Q14213 229 aa6.89□□□□□ -1.31
PSEN1-205ENST00000406768 LAMTOR3Q9UHA4 124 aa6.89□□□□□ -1.31
PSEN1-205ENST00000406768 ACACBO00763 2458 aa6.89□□□□□ -1.31
PSEN1-205ENST00000406768 ABCA4P78363 2273 aa6.89□□□□□ -1.31
PSEN1-205ENST00000406768 CENPFP49454 3210 aa6.89□□□□□ -1.31
PSEN1-205ENST00000406768 A0A087WVE0 104 aa6.89□□□□□ -1.31
PSEN1-205ENST00000406768 NXPH4O95158 308 aa6.89□□□□□ -1.31
PSEN1-205ENST00000406768 BRCA2P51587 3418 aa6.89□□□□□ -1.31
PSEN1-205ENST00000406768 TMEM178BH3BS89 294 aa6.89□□□□□ -1.31
PSEN1-205ENST00000406768 LINC01546A6NGU7 62 aa6.88□□□□□ -1.31
PSEN1-205ENST00000406768 F6UB75 175 aa6.88□□□□□ -1.31
PSEN1-205ENST00000406768 TET2Q6N021 2002 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-205ENST00000406768 TIMM17BO60830 172 aa6.88□□□□□ -1.31
PSEN1-205ENST00000406768 MRPL53Q96EL3 112 aaKnown RBP6.88□□□□□ -1.31
PSEN1-205ENST00000406768 H0YGX0 51 aa6.88□□□□□ -1.31
PSEN1-205ENST00000406768 Q6JHZ5 121 aa6.88□□□□□ -1.31
PSEN1-205ENST00000406768 ORMDL1Q9P0S3 153 aa6.88□□□□□ -1.31
PSEN1-205ENST00000406768 U3KQE9 123 aa6.88□□□□□ -1.31
PSEN1-205ENST00000406768 FASNP49327 2511 aaKnown RBP6.88□□□□□ -1.31
PSEN1-205ENST00000406768 COL5A1P20908 1838 aaPredicted RBP6.87□□□□□ -1.31
PSEN1-205ENST00000406768 SNRPD3P62318 126 aaKnown RBP6.87□□□□□ -1.31
PSEN1-205ENST00000406768 RPL36AP83881 106 aaKnown RBP6.87□□□□□ -1.31
PSEN1-205ENST00000406768 FAM27E3Q08E93 113 aa6.87□□□□□ -1.31
PSEN1-205ENST00000406768 MRPL55Q7Z7F7 128 aaKnown RBP6.87□□□□□ -1.31
PSEN1-205ENST00000406768 RPL36ALQ969Q0 106 aaKnown RBP6.87□□□□□ -1.31
PSEN1-205ENST00000406768 ADAMTS20P59510 1910 aa6.87□□□□□ -1.31
PSEN1-205ENST00000406768 ARHGAP32A7KAX9 2087 aa6.87□□□□□ -1.31
PSEN1-205ENST00000406768 ELANEP08246 267 aa6.87□□□□□ -1.31
PSEN1-205ENST00000406768 RUSC1-AS1Q66K80 236 aa6.87□□□□□ -1.31
PSEN1-205ENST00000406768 TMEM86BQ8N661 226 aa6.87□□□□□ -1.31
PSEN1-205ENST00000406768 PRORYQ9H606 182 aa6.87□□□□□ -1.31
PSEN1-205ENST00000406768 NOTCH3Q9UM47 2321 aa6.86□□□□□ -1.31
PSEN1-205ENST00000406768 IGLV4-69A0A075B6H9 119 aa6.86□□□□□ -1.31
PSEN1-205ENST00000406768 EPG5Q9HCE0 2579 aa6.86□□□□□ -1.31
PSEN1-205ENST00000406768 IGLV1-44P01699 117 aa6.86□□□□□ -1.31
PSEN1-205ENST00000406768 LAMA3Q16787 3333 aa6.86□□□□□ -1.31
PSEN1-205ENST00000406768 C20orf203Q8NBC4 194 aa6.86□□□□□ -1.31
PSEN1-205ENST00000406768 CCL21O00585 134 aa6.86□□□□□ -1.31
PSEN1-205ENST00000406768 BUB3O43684 328 aa6.86□□□□□ -1.31
PSEN1-205ENST00000406768 ZNF883P0CG24 379 aa6.86□□□□□ -1.31
PSEN1-205ENST00000406768 LECT2O14960 151 aa6.86□□□□□ -1.31
PSEN1-205ENST00000406768 ATP5EP2Q5VTU8 51 aa6.86□□□□□ -1.31
PSEN1-205ENST00000406768 C9orf47Q6ZRZ4 202 aa6.86□□□□□ -1.31
PSEN1-205ENST00000406768 UPK3BQ9BT76 320 aa6.86□□□□□ -1.31
PSEN1-205ENST00000406768 CTSGP08311 255 aa6.85□□□□□ -1.31
PSEN1-205ENST00000406768 MRPS36P82909 103 aaKnown RBP6.85□□□□□ -1.31
PSEN1-205ENST00000406768 IGHV7-4-1A0A0J9YVY3 117 aa6.85□□□□□ -1.31
PSEN1-205ENST00000406768 A0A0J9YX75 114 aa6.85□□□□□ -1.31
PSEN1-205ENST00000406768 PATE3B3GLJ2 98 aa6.85□□□□□ -1.31
PSEN1-205ENST00000406768 DEFB109BQ30KR1 87 aa6.85□□□□□ -1.31
PSEN1-205ENST00000406768 ENHOQ6UWT2 76 aa6.85□□□□□ -1.31
PSEN1-205ENST00000406768 Q6ZSV7 163 aa6.85□□□□□ -1.31
PSEN1-205ENST00000406768 POM121L12Q8N7R1 296 aa6.85□□□□□ -1.31
PSEN1-205ENST00000406768 SPTA1P02549 2419 aa6.85□□□□□ -1.31
PSEN1-205ENST00000406768 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.85□□□□□ -1.31
PSEN1-205ENST00000406768 HIST2H2BCQ6DN03 193 aa6.85□□□□□ -1.31
PSEN1-205ENST00000406768 HIST2H2BDQ6DRA6 164 aa6.85□□□□□ -1.31
PSEN1-205ENST00000406768 FAM19A4Q96LR4 140 aa6.85□□□□□ -1.31
PSEN1-205ENST00000406768 LINC00574Q9H8X3 128 aa6.85□□□□□ -1.31
PSEN1-205ENST00000406768 C11orf21Q9P2W6 132 aa6.85□□□□□ -1.31
PSEN1-205ENST00000406768 MED13LQ71F56 2210 aa6.84□□□□□ -1.31
PSEN1-205ENST00000406768 IGIPA6NJ69 53 aa6.84□□□□□ -1.31
PSEN1-205ENST00000406768 MED14OSP0DP75 135 aa6.84□□□□□ -1.31
PSEN1-205ENST00000406768 DYNLRB2Q8TF09 96 aa6.84□□□□□ -1.31
PSEN1-205ENST00000406768 HTTP42858 3142 aa6.84□□□□□ -1.31
PSEN1-205ENST00000406768 IGLV11-55A0A075B6I3 123 aa6.84□□□□□ -1.31
PSEN1-205ENST00000406768 JMJD7-PLA2G4BH0Y9G9 81 aa6.84□□□□□ -1.31
PSEN1-205ENST00000406768 KHDC1LQ5JSQ8 128 aa6.84□□□□□ -1.31
PSEN1-205ENST00000406768 ATP1A1-AS1Q5TC04 95 aa6.84□□□□□ -1.31
PSEN1-205ENST00000406768 IGLV3-9A0A075B6K5 115 aa6.84□□□□□ -1.32
PSEN1-205ENST00000406768 IGHV4-4A0A075B6R2 117 aa6.84□□□□□ -1.32
PSEN1-205ENST00000406768 DAD1P61803 113 aa6.84□□□□□ -1.32
PSEN1-205ENST00000406768 FAM223AQ8IWN6 122 aa6.84□□□□□ -1.32
PSEN1-205ENST00000406768 C9orf85Q96MD7 179 aa6.84□□□□□ -1.32
PSEN1-205ENST00000406768 RETNQ9HD89 108 aa6.84□□□□□ -1.32
PSEN1-205ENST00000406768 COX8CQ7Z4L0 72 aa6.83□□□□□ -1.32
PSEN1-205ENST00000406768 SNURFQ9Y675 71 aa6.83□□□□□ -1.32
PSEN1-205ENST00000406768 SZT2Q5T011 3432 aa6.83□□□□□ -1.32
PSEN1-205ENST00000406768 TNRC18O15417 2968 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-205ENST00000406768 SPTAN1Q13813 2472 aaKnown RBP6.83□□□□□ -1.32
PSEN1-205ENST00000406768 IGHV1OR15-1A0A075B7D0 117 aa6.83□□□□□ -1.32
PSEN1-205ENST00000406768 IGHV3-11P01762 117 aa6.83□□□□□ -1.32
PSEN1-205ENST00000406768 LINC00308Q8TCZ7 52 aa6.83□□□□□ -1.32
PSEN1-205ENST00000406768 SND1-IT1Q9HBX3 110 aa6.83□□□□□ -1.32
PSEN1-205ENST00000406768 PTPRBP23467 1997 aa6.83□□□□□ -1.32
PSEN1-205ENST00000406768 XCL1P47992 114 aa6.82□□□□□ -1.32
PSEN1-205ENST00000406768 BSPH1Q075Z2 132 aa6.82□□□□□ -1.32
PSEN1-205ENST00000406768 LINC00336Q6ZUF6 198 aa6.82□□□□□ -1.32
PSEN1-205ENST00000406768 XCL2Q9UBD3 114 aa6.82□□□□□ -1.32
PSEN1-205ENST00000406768 PF4P02776 101 aa6.82□□□□□ -1.32
PSEN1-205ENST00000406768 RNASE6Q93091 150 aaKnown RBP6.82□□□□□ -1.32
PSEN1-205ENST00000406768 GPR179Q6PRD1 2367 aa6.82□□□□□ -1.32
PSEN1-205ENST00000406768 NDUFC1O43677 76 aa6.82□□□□□ -1.32
PSEN1-205ENST00000406768 CRYGDP07320 174 aa6.82□□□□□ -1.32
PSEN1-205ENST00000406768 ATP5EP56381 51 aaPredicted RBP6.82□□□□□ -1.32
PSEN1-205ENST00000406768 DNAH12Q6ZR08 3092 aa6.82□□□□□ -1.32
PSEN1-205ENST00000406768 IGLV4-3A0A075B6K6 122 aa6.81□□□□□ -1.32
PSEN1-205ENST00000406768 LYNX1G3V0Z9 82 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms