RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 AP5S1Q9NUS5 200 aa2.65□□□□□ -1.98
RTN4-208ENST00000404909 A8MZ25 164 aa2.65□□□□□ -1.99
RTN4-208ENST00000404909 M0QY20 66 aa2.65□□□□□ -1.99
RTN4-208ENST00000404909 RS1O15537 224 aa2.65□□□□□ -1.99
RTN4-208ENST00000404909 SUMO2P61956 95 aaKnown RBP2.65□□□□□ -1.99
RTN4-208ENST00000404909 SBSPONQ8IVN8 264 aa2.65□□□□□ -1.99
RTN4-208ENST00000404909 OR10D4PQ8NGN7 298 aa2.65□□□□□ -1.99
RTN4-208ENST00000404909 TMEM18Q96B42 140 aa2.65□□□□□ -1.99
RTN4-208ENST00000404909 URB1-AS1Q96HZ7 61 aa2.65□□□□□ -1.99
RTN4-208ENST00000404909 OVOL2Q9BRP0 275 aa2.65□□□□□ -1.99
RTN4-208ENST00000404909 Q9UF83 564 aa2.65□□□□□ -1.99
RTN4-208ENST00000404909 LAMTOR2Q9Y2Q5 125 aa2.65□□□□□ -1.99
RTN4-208ENST00000404909 TRGV4A0A0C4DH28 118 aa2.65□□□□□ -1.99
RTN4-208ENST00000404909 RHODO00212 210 aa2.65□□□□□ -1.99
RTN4-208ENST00000404909 TCAPO15273 167 aa2.65□□□□□ -1.99
RTN4-208ENST00000404909 MIFP14174 115 aa2.65□□□□□ -1.99
RTN4-208ENST00000404909 PIK3CD-AS1Q5SR53 167 aa2.65□□□□□ -1.99
RTN4-208ENST00000404909 PTH2Q96A98 100 aa2.65□□□□□ -1.99
RTN4-208ENST00000404909 PACRGQ96M98 296 aaPredicted RBP2.65□□□□□ -1.99
RTN4-208ENST00000404909 ST20Q9HBF5 79 aa2.65□□□□□ -1.99
RTN4-208ENST00000404909 TRAV4A0A0B4J268 109 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 SDHAF1A6NFY7 115 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 H7C1H1 209 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 PPP1R17O96001 155 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 UFSP1Q6NVU6 142 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 Q8NAQ8 132 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 CHCHD1Q96BP2 118 aaKnown RBP2.64□□□□□ -1.99
RTN4-208ENST00000404909 TNFRSF18Q9Y5U5 241 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 IGHV1-24A0A0C4DH33 117 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 DAD1P61803 113 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 KPRPQ5T749 579 aaPredicted RBP2.64□□□□□ -1.99
RTN4-208ENST00000404909 TMEM70Q9BUB7 260 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 SMIM2Q9BVW6 85 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 NXT2Q9NPJ8 142 aaKnown RBP2.64□□□□□ -1.99
RTN4-208ENST00000404909 NIT2Q9NQR4 276 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 DKK2Q9UBU2 259 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 CELA1Q9UNI1 258 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 LYRM9A8MSI8 78 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 ESDP10768 282 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 HTN3P15516 51 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 ZFP2Q6ZN57 461 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 Q8N8P6 123 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 SLC25A29Q8N8R3 303 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 C20orf78Q9BR46 151 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 NDUFAF3Q9BU61 184 aa2.64□□□□□ -1.99
RTN4-208ENST00000404909 HUWE1Q7Z6Z7 4374 aaKnown RBP2.63□□□□□ -1.99
RTN4-208ENST00000404909 IGHV3-38A0A0C4DH36 116 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 H0Y8G0 127 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 NUDT3O95989 172 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 SPART-AS1P0CW21 52 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 ZNRF2Q8NHG8 242 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 PHLDA1Q8WV24 401 aaPredicted RBP2.63□□□□□ -1.99
RTN4-208ENST00000404909 KIR2DL4Q99706 377 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 IGLV2-18A0A075B6J9 118 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 GAGE12JA6NER3 117 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 K7EQD1 137 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 VCYO14598 125 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 LEPROTL1O95214 131 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 FCER1GP30273 86 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 KRTDAPP60985 99 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 GAGE1Q13065 139 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 GAGE4Q13068 117 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 GAGE5Q13069 117 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 LAGE3Q14657 143 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 GAGE13Q4V321 117 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 NEXN-AS1Q8NBZ9 246 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 TP53TG1Q9Y2A0 90 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 MEGF8Q7Z7M0 2845 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 PRKDCP78527 4128 aaKnown RBP2.63□□□□□ -1.99
RTN4-208ENST00000404909 A0A0J9YWU9 116 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 LOC100131303A0A0U1RQF7 123 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 POLR2KP53803 58 aaKnown RBP2.63□□□□□ -1.99
RTN4-208ENST00000404909 FHL2Q14192 279 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 LINC00173Q6ZV60 143 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 C18orf15Q96N68 181 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 SPATA25Q9BR10 227 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 HHLA3Q9XRX5 114 aa2.63□□□□□ -1.99
RTN4-208ENST00000404909 A0A0J9YY99 117 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 F5H768 121 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 HBDP02042 147 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 COL7A1Q02388 2944 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 DNAH9Q9NYC9 4486 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 TRBV7-3A0A075B6L6 115 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 TRBV6-5A0A0K0K1A5 114 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 TRBV27A0A0K0K1C4 114 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 I3L3M4 83 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 SCGB1D1O95968 90 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 RPL36AP83881 106 aaKnown RBP2.62□□□□□ -1.99
RTN4-208ENST00000404909 ORMDL2Q53FV1 153 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 LINC00612Q8N6U2 182 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 RPL36ALQ969Q0 106 aaKnown RBP2.62□□□□□ -1.99
RTN4-208ENST00000404909 PRADC1Q9BSG0 188 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 A0A096LNJ9 63 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 A0A096LPF7 62 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 ATP5G1P05496 136 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 RHOHQ15669 191 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 ZMAT4Q9H898 229 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 HSPB8Q9UJY1 196 aa2.62□□□□□ -1.99
RTN4-208ENST00000404909 TRAV26-1A0A087WT03 109 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 TRBV10-1A0A0K0K1A3 114 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms