RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 GYPEP15421 78 aa8.59□□□□□ -1.03
LINC00339-201ENST00000404210 NEXN-AS1Q8NBZ9 246 aa8.59□□□□□ -1.03
LINC00339-201ENST00000404210 STAB2Q8WWQ8 2551 aa8.58□□□□□ -1.04
LINC00339-201ENST00000404210 TRBV7-3A0A075B6L6 115 aa8.58□□□□□ -1.04
LINC00339-201ENST00000404210 TRAV26-2A0A0B4J265 109 aa8.58□□□□□ -1.04
LINC00339-201ENST00000404210 APCSP02743 223 aa8.58□□□□□ -1.04
LINC00339-201ENST00000404210 P0DMU3 169 aa8.58□□□□□ -1.04
LINC00339-201ENST00000404210 FAM231AP0DMU4 169 aa8.58□□□□□ -1.04
LINC00339-201ENST00000404210 FAM231CP0DMU5 169 aa8.58□□□□□ -1.04
LINC00339-201ENST00000404210 CKS2P33552 79 aa8.58□□□□□ -1.04
LINC00339-201ENST00000404210 RPL36AP83881 106 aaKnown RBP8.58□□□□□ -1.04
LINC00339-201ENST00000404210 ZFAND6Q6FIF0 208 aa8.58□□□□□ -1.04
LINC00339-201ENST00000404210 SH2D6Q7Z4S9 175 aa8.58□□□□□ -1.04
LINC00339-201ENST00000404210 ZNRF2Q8NHG8 242 aa8.58□□□□□ -1.04
LINC00339-201ENST00000404210 RPL36ALQ969Q0 106 aaKnown RBP8.58□□□□□ -1.04
LINC00339-201ENST00000404210 Q9UF83 564 aa8.58□□□□□ -1.04
LINC00339-201ENST00000404210 APLNQ9ULZ1 77 aa8.58□□□□□ -1.04
LINC00339-201ENST00000404210 TRAPPC1Q9Y5R8 145 aa8.58□□□□□ -1.04
LINC00339-201ENST00000404210 TNFRSF18Q9Y5U5 241 aa8.58□□□□□ -1.04
LINC00339-201ENST00000404210 ICOSQ9Y6W8 199 aa8.58□□□□□ -1.04
LINC00339-201ENST00000404210 A0A096LPF7 62 aa8.57□□□□□ -1.04
LINC00339-201ENST00000404210 LOC100131303A0A0U1RQF7 123 aa8.57□□□□□ -1.04
LINC00339-201ENST00000404210 GAGE12JA6NER3 117 aa8.57□□□□□ -1.04
LINC00339-201ENST00000404210 NUDT3O95989 172 aa8.57□□□□□ -1.04
LINC00339-201ENST00000404210 GAGE1Q13065 139 aa8.57□□□□□ -1.04
LINC00339-201ENST00000404210 GAGE4Q13068 117 aa8.57□□□□□ -1.04
LINC00339-201ENST00000404210 GAGE5Q13069 117 aa8.57□□□□□ -1.04
LINC00339-201ENST00000404210 GAGE13Q4V321 117 aa8.57□□□□□ -1.04
LINC00339-201ENST00000404210 ORMDL3Q8N138 153 aa8.57□□□□□ -1.04
LINC00339-201ENST00000404210 MRPL18Q9H0U6 180 aaKnown RBP8.57□□□□□ -1.04
LINC00339-201ENST00000404210 TRBV6-5A0A0K0K1A5 114 aa8.56□□□□□ -1.04
LINC00339-201ENST00000404210 D6R8Y8 96 aa8.56□□□□□ -1.04
LINC00339-201ENST00000404210 SMKR1H3BMG3 65 aa8.56□□□□□ -1.04
LINC00339-201ENST00000404210 PHOX2AO14813 284 aa8.56□□□□□ -1.04
LINC00339-201ENST00000404210 EREGO14944 169 aa8.56□□□□□ -1.04
LINC00339-201ENST00000404210 GAS8-AS1O95177 125 aa8.56□□□□□ -1.04
LINC00339-201ENST00000404210 LINC00694P0DN24 101 aa8.56□□□□□ -1.04
LINC00339-201ENST00000404210 SRIP30626 198 aa8.56□□□□□ -1.04
LINC00339-201ENST00000404210 FABP9Q0Z7S8 132 aa8.56□□□□□ -1.04
LINC00339-201ENST00000404210 OR10J3Q5JRS4 329 aa8.56□□□□□ -1.04
LINC00339-201ENST00000404210 CASC10Q5T4H9 136 aa8.56□□□□□ -1.04
LINC00339-201ENST00000404210 NEGR1Q7Z3B1 354 aa8.56□□□□□ -1.04
LINC00339-201ENST00000404210 RPL39LQ96EH5 51 aaKnown RBP8.56□□□□□ -1.04
LINC00339-201ENST00000404210 RAB5AP20339 215 aa8.55□□□□□ -1.04
LINC00339-201ENST00000404210 RPS10P46783 165 aaKnown RBP8.55□□□□□ -1.04
LINC00339-201ENST00000404210 UBE2D3P61077 147 aa8.55□□□□□ -1.04
LINC00339-201ENST00000404210 UBE2D2P62837 147 aa8.55□□□□□ -1.04
LINC00339-201ENST00000404210 NRACQ8N912 160 aa8.55□□□□□ -1.04
LINC00339-201ENST00000404210 ATP6V0E2Q8NHE4 81 aa8.55□□□□□ -1.04
LINC00339-201ENST00000404210 PRELID3AQ96N28 172 aa8.55□□□□□ -1.04
LINC00339-201ENST00000404210 ST20Q9HBF5 79 aa8.55□□□□□ -1.04
LINC00339-201ENST00000404210 LAMTOR2Q9Y2Q5 125 aa8.55□□□□□ -1.04
LINC00339-201ENST00000404210 TGP01266 2768 aa8.55□□□□□ -1.04
LINC00339-201ENST00000404210 PRSS47A8MTI9 375 aa8.54□□□□□ -1.04
LINC00339-201ENST00000404210 TNFRSF6BO95407 300 aa8.54□□□□□ -1.04
LINC00339-201ENST00000404210 NCR2O95944 276 aa8.54□□□□□ -1.04
LINC00339-201ENST00000404210 POLR2KP53803 58 aaKnown RBP8.54□□□□□ -1.04
LINC00339-201ENST00000404210 KIAA1644Q3SXP7 199 aa8.54□□□□□ -1.04
LINC00339-201ENST00000404210 DAZ4Q86SG3 579 aaKnown RBP8.54□□□□□ -1.04
LINC00339-201ENST00000404210 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.54□□□□□ -1.04
LINC00339-201ENST00000404210 C20orf78Q9BR46 151 aa8.54□□□□□ -1.04
LINC00339-201ENST00000404210 DAZ3Q9NR90 486 aaKnown RBP8.54□□□□□ -1.04
LINC00339-201ENST00000404210 DNAH7Q8WXX0 4024 aa8.53□□□□□ -1.04
LINC00339-201ENST00000404210 RPL32P62910 135 aaKnown RBP8.53□□□□□ -1.04
LINC00339-201ENST00000404210 LYPD5Q6UWN5 251 aa8.53□□□□□ -1.04
LINC00339-201ENST00000404210 ALKBH7Q9BT30 221 aaPredicted RBP8.53□□□□□ -1.04
LINC00339-201ENST00000404210 GTSF1LQ9H1H1 148 aa8.53□□□□□ -1.04
LINC00339-201ENST00000404210 SDHAF1A6NFY7 115 aa8.52□□□□□ -1.05
LINC00339-201ENST00000404210 VCYO14598 125 aa8.52□□□□□ -1.05
LINC00339-201ENST00000404210 NPYP01303 97 aa8.52□□□□□ -1.05
LINC00339-201ENST00000404210 TIRAPP58753 221 aa8.52□□□□□ -1.05
LINC00339-201ENST00000404210 SUMO2P61956 95 aaKnown RBP8.52□□□□□ -1.05
LINC00339-201ENST00000404210 TMEM97Q5BJF2 176 aa8.52□□□□□ -1.05
LINC00339-201ENST00000404210 TRBV27A0A0K0K1C4 114 aa8.51□□□□□ -1.05
LINC00339-201ENST00000404210 I3L3M4 83 aa8.51□□□□□ -1.05
LINC00339-201ENST00000404210 TRGC2P03986 189 aa8.51□□□□□ -1.05
LINC00339-201ENST00000404210 ESRGQ1W209 222 aa8.51□□□□□ -1.05
LINC00339-201ENST00000404210 TMEM70Q9BUB7 260 aa8.51□□□□□ -1.05
LINC00339-201ENST00000404210 DYNC2H1Q8NCM8 4307 aaKnown RBP8.5□□□□□ -1.05
LINC00339-201ENST00000404210 PMCHP20382 165 aa8.5□□□□□ -1.05
LINC00339-201ENST00000404210 CCL18P55774 89 aa8.5□□□□□ -1.05
LINC00339-201ENST00000404210 MAP1LC3AQ9H492 121 aa8.5□□□□□ -1.05
LINC00339-201ENST00000404210 IGHV3-38A0A0C4DH36 116 aa8.49□□□□□ -1.05
LINC00339-201ENST00000404210 J3QL48 77 aa8.49□□□□□ -1.05
LINC00339-201ENST00000404210 SMIM2Q9BVW6 85 aa8.49□□□□□ -1.05
LINC00339-201ENST00000404210 TCAPO15273 167 aa8.48□□□□□ -1.05
LINC00339-201ENST00000404210 COTL1Q14019 142 aa8.48□□□□□ -1.05
LINC00339-201ENST00000404210 LELP1Q5T871 98 aa8.48□□□□□ -1.05
LINC00339-201ENST00000404210 NTM-AS1Q6ZSK4 140 aa8.48□□□□□ -1.05
LINC00339-201ENST00000404210 KIR2DL4Q99706 377 aa8.48□□□□□ -1.05
LINC00339-201ENST00000404210 LINC00588Q9Y4M8 146 aa8.48□□□□□ -1.05
LINC00339-201ENST00000404210 CSMD3Q7Z407 3707 aa8.47□□□□□ -1.05
LINC00339-201ENST00000404210 IGLV2-18A0A075B6J9 118 aa8.47□□□□□ -1.05
LINC00339-201ENST00000404210 TRBV6-8A0A0A6YYG3 113 aa8.47□□□□□ -1.05
LINC00339-201ENST00000404210 LOC389332A0A1B0GUA5 103 aa8.47□□□□□ -1.05
LINC00339-201ENST00000404210 LGALS9CQ6DKI2 356 aa8.47□□□□□ -1.05
LINC00339-201ENST00000404210 Q8N8P6 123 aa8.47□□□□□ -1.05
LINC00339-201ENST00000404210 NXT2Q9NPJ8 142 aaKnown RBP8.47□□□□□ -1.05
LINC00339-201ENST00000404210 MRPS16Q9Y3D3 137 aaKnown RBP8.47□□□□□ -1.05
LINC00339-201ENST00000404210 TRBV25-1A0A075B6N4 114 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms