RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 SUMO2P61956 95 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-205ENST00000397761 DEFB4AO15263 64 aa13.82□□□□□ -0.2
PDLIM2-205ENST00000397761 C11orf68Q9H3H3 251 aaKnown RBP13.82□□□□□ -0.2
PDLIM2-205ENST00000397761 NXT2Q9NPJ8 142 aaKnown RBP13.82□□□□□ -0.2
PDLIM2-205ENST00000397761 NIT2Q9NQR4 276 aa13.82□□□□□ -0.2
PDLIM2-205ENST00000397761 DEFB121Q5J5C9 76 aa13.81□□□□□ -0.2
PDLIM2-205ENST00000397761 Q8N8P6 123 aa13.81□□□□□ -0.2
PDLIM2-205ENST00000397761 PRSS3P2Q8NHM4 247 aa13.81□□□□□ -0.2
PDLIM2-205ENST00000397761 SPATA25Q9BR10 227 aa13.81□□□□□ -0.2
PDLIM2-205ENST00000397761 SMIM2Q9BVW6 85 aa13.81□□□□□ -0.2
PDLIM2-205ENST00000397761 PRKDCP78527 4128 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-205ENST00000397761 LOC389332A0A1B0GUA5 103 aa13.8□□□□□ -0.2
PDLIM2-205ENST00000397761 PMCHP20382 165 aa13.8□□□□□ -0.2
PDLIM2-205ENST00000397761 POLR2KP53803 58 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-205ENST00000397761 DEFA6Q01524 100 aa13.8□□□□□ -0.2
PDLIM2-205ENST00000397761 RNASEKQ6P5S7 137 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-205ENST00000397761 PACRGQ96M98 296 aaPredicted RBP13.8□□□□□ -0.2
PDLIM2-205ENST00000397761 AP5S1Q9NUS5 200 aa13.8□□□□□ -0.2
PDLIM2-205ENST00000397761 TEX48A0A1B0GUV7 120 aa13.8□□□□□ -0.2
PDLIM2-205ENST00000397761 SPART-AS1P0CW21 52 aa13.8□□□□□ -0.2
PDLIM2-205ENST00000397761 DEFB130BP0DP73 79 aa13.8□□□□□ -0.2
PDLIM2-205ENST00000397761 DEFB130AP0DP74 79 aa13.8□□□□□ -0.2
PDLIM2-205ENST00000397761 ST20Q9HBF5 79 aa13.8□□□□□ -0.2
PDLIM2-205ENST00000397761 CELA1Q9UNI1 258 aa13.8□□□□□ -0.2
PDLIM2-205ENST00000397761 FHL2Q14192 279 aa13.79□□□□□ -0.2
PDLIM2-205ENST00000397761 PDZD11Q5EBL8 140 aa13.79□□□□□ -0.2
PDLIM2-205ENST00000397761 FA2HQ7L5A8 372 aa13.79□□□□□ -0.2
PDLIM2-205ENST00000397761 HIST1H2BLQ99880 126 aa13.79□□□□□ -0.2
PDLIM2-205ENST00000397761 TMEM70Q9BUB7 260 aa13.79□□□□□ -0.2
PDLIM2-205ENST00000397761 TRBV27A0A0K0K1C4 114 aa13.78□□□□□ -0.2
PDLIM2-205ENST00000397761 HSBP1O75506 76 aa13.78□□□□□ -0.2
PDLIM2-205ENST00000397761 DNAJC30Q96LL9 226 aa13.78□□□□□ -0.2
PDLIM2-205ENST00000397761 TRBV10-1A0A0K0K1A3 114 aa13.77□□□□□ -0.21
PDLIM2-205ENST00000397761 TRBV6-4A0A1B0GX49 114 aa13.77□□□□□ -0.21
PDLIM2-205ENST00000397761 SDHAF1A6NFY7 115 aa13.77□□□□□ -0.21
PDLIM2-205ENST00000397761 K7EMI3 77 aa13.77□□□□□ -0.21
PDLIM2-205ENST00000397761 P0DMU3 169 aa13.77□□□□□ -0.21
PDLIM2-205ENST00000397761 FAM231AP0DMU4 169 aa13.77□□□□□ -0.21
PDLIM2-205ENST00000397761 FAM231CP0DMU5 169 aa13.77□□□□□ -0.21
PDLIM2-205ENST00000397761 S100A2P29034 98 aa13.77□□□□□ -0.21
PDLIM2-205ENST00000397761 NEXN-AS1Q8NBZ9 246 aa13.77□□□□□ -0.21
PDLIM2-205ENST00000397761 K7EQD1 137 aa13.76□□□□□ -0.21
PDLIM2-205ENST00000397761 SLC25A29Q8N8R3 303 aa13.76□□□□□ -0.21
PDLIM2-205ENST00000397761 TMEM18Q96B42 140 aa13.76□□□□□ -0.21
PDLIM2-205ENST00000397761 Q9UF83 564 aa13.76□□□□□ -0.21
PDLIM2-205ENST00000397761 COL7A1Q02388 2944 aa13.75□□□□□ -0.21
PDLIM2-205ENST00000397761 DAD1P61803 113 aa13.75□□□□□ -0.21
PDLIM2-205ENST00000397761 TGP01266 2768 aa13.75□□□□□ -0.21
PDLIM2-205ENST00000397761 TRGV4A0A0C4DH28 118 aa13.74□□□□□ -0.21
PDLIM2-205ENST00000397761 IGHV1-24A0A0C4DH33 117 aa13.74□□□□□ -0.21
PDLIM2-205ENST00000397761 VCYO14598 125 aa13.74□□□□□ -0.21
PDLIM2-205ENST00000397761 AMTP48728 403 aa13.74□□□□□ -0.21
PDLIM2-205ENST00000397761 FAM19A2Q8N3H0 131 aa13.74□□□□□ -0.21
PDLIM2-205ENST00000397761 MRAPQ8TCY5 172 aa13.74□□□□□ -0.21
PDLIM2-205ENST00000397761 A0A096LNJ9 63 aa13.74□□□□□ -0.21
PDLIM2-205ENST00000397761 FABP4P15090 132 aa13.74□□□□□ -0.21
PDLIM2-205ENST00000397761 B9D2Q9BPU9 175 aa13.74□□□□□ -0.21
PDLIM2-205ENST00000397761 TNFRSF18Q9Y5U5 241 aa13.74□□□□□ -0.21
PDLIM2-205ENST00000397761 ATP5G1P05496 136 aa13.72□□□□□ -0.21
PDLIM2-205ENST00000397761 LAGE3Q14657 143 aa13.72□□□□□ -0.21
PDLIM2-205ENST00000397761 RHOHQ15669 191 aa13.72□□□□□ -0.21
PDLIM2-205ENST00000397761 TRBV7-3A0A075B6L6 115 aa13.71□□□□□ -0.21
PDLIM2-205ENST00000397761 PMCHL1Q16048 86 aa13.71□□□□□ -0.21
PDLIM2-205ENST00000397761 C12orf74Q32Q52 190 aa13.71□□□□□ -0.21
PDLIM2-205ENST00000397761 HHLA3Q9XRX5 114 aa13.71□□□□□ -0.21
PDLIM2-205ENST00000397761 A0A0J9YWU9 116 aa13.7□□□□□ -0.22
PDLIM2-205ENST00000397761 I3L3M4 83 aa13.7□□□□□ -0.22
PDLIM2-205ENST00000397761 TCAPO15273 167 aa13.7□□□□□ -0.22
PDLIM2-205ENST00000397761 LINC00694P0DN24 101 aa13.7□□□□□ -0.22
PDLIM2-205ENST00000397761 FCER1GP30273 86 aa13.7□□□□□ -0.22
PDLIM2-205ENST00000397761 CRYBA4P53673 196 aa13.7□□□□□ -0.22
PDLIM2-205ENST00000397761 ORMDL2Q53FV1 153 aa13.7□□□□□ -0.22
PDLIM2-205ENST00000397761 NEGR1Q7Z3B1 354 aa13.7□□□□□ -0.22
PDLIM2-205ENST00000397761 KIR2DL4Q99706 377 aa13.7□□□□□ -0.22
PDLIM2-205ENST00000397761 PRO0255Q9UI72 69 aa13.7□□□□□ -0.22
PDLIM2-205ENST00000397761 UBE2D3P61077 147 aa13.69□□□□□ -0.22
PDLIM2-205ENST00000397761 UBE2D2P62837 147 aa13.69□□□□□ -0.22
PDLIM2-205ENST00000397761 RPL36AP83881 106 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-205ENST00000397761 RPL36ALQ969Q0 106 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-205ENST00000397761 ZMAT4Q9H898 229 aa13.69□□□□□ -0.22
PDLIM2-205ENST00000397761 TSHBP01222 138 aa13.68□□□□□ -0.22
PDLIM2-205ENST00000397761 HBDP02042 147 aa13.68□□□□□ -0.22
PDLIM2-205ENST00000397761 ZNRF2Q8NHG8 242 aa13.68□□□□□ -0.22
PDLIM2-205ENST00000397761 PRADC1Q9BSG0 188 aa13.68□□□□□ -0.22
PDLIM2-205ENST00000397761 OR10D4PQ8NGN7 298 aa13.67□□□□□ -0.22
PDLIM2-205ENST00000397761 STAB2Q8WWQ8 2551 aa13.67□□□□□ -0.22
PDLIM2-205ENST00000397761 LOC100131303A0A0U1RQF7 123 aa13.66□□□□□ -0.22
PDLIM2-205ENST00000397761 DAZ4Q86SG3 579 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-205ENST00000397761 DAZ3Q9NR90 486 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-205ENST00000397761 LEPROTL1O95214 131 aa13.65□□□□□ -0.22
PDLIM2-205ENST00000397761 VSIG2Q96IQ7 327 aa13.65□□□□□ -0.22
PDLIM2-205ENST00000397761 GAGE12JA6NER3 117 aa13.64□□□□□ -0.23
PDLIM2-205ENST00000397761 GAGE1Q13065 139 aa13.64□□□□□ -0.23
PDLIM2-205ENST00000397761 GAGE4Q13068 117 aa13.64□□□□□ -0.23
PDLIM2-205ENST00000397761 GAGE5Q13069 117 aa13.64□□□□□ -0.23
PDLIM2-205ENST00000397761 GAGE13Q4V321 117 aa13.64□□□□□ -0.23
PDLIM2-205ENST00000397761 HUWE1Q7Z6Z7 4374 aaKnown RBP13.64□□□□□ -0.23
PDLIM2-205ENST00000397761 NUDT3O95989 172 aa13.63□□□□□ -0.23
PDLIM2-205ENST00000397761 G0S2P27469 103 aa13.63□□□□□ -0.23
PDLIM2-205ENST00000397761 AKR1D1P51857 326 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms