RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 MT-ND6P03923 174 aa13.55□□□□□ -0.24
MAP1LC3A-203ENST00000397709 ICOSQ9Y6W8 199 aa13.55□□□□□ -0.24
MAP1LC3A-203ENST00000397709 A0A096LPF7 62 aa13.54□□□□□ -0.24
MAP1LC3A-203ENST00000397709 COLCA2A8K830 154 aa13.54□□□□□ -0.24
MAP1LC3A-203ENST00000397709 SMKR1H3BMG3 65 aa13.54□□□□□ -0.24
MAP1LC3A-203ENST00000397709 NCR2O95944 276 aa13.54□□□□□ -0.24
MAP1LC3A-203ENST00000397709 DNAJC30Q96LL9 226 aa13.54□□□□□ -0.24
MAP1LC3A-203ENST00000397709 GAGE12JA6NER3 117 aa13.53□□□□□ -0.24
MAP1LC3A-203ENST00000397709 NUDT3O95989 172 aa13.53□□□□□ -0.24
MAP1LC3A-203ENST00000397709 TCTAP57738 103 aa13.53□□□□□ -0.24
MAP1LC3A-203ENST00000397709 GAGE1Q13065 139 aa13.53□□□□□ -0.24
MAP1LC3A-203ENST00000397709 GAGE4Q13068 117 aa13.53□□□□□ -0.24
MAP1LC3A-203ENST00000397709 GAGE5Q13069 117 aa13.53□□□□□ -0.24
MAP1LC3A-203ENST00000397709 MRPL23Q16540 153 aaKnown RBP13.53□□□□□ -0.24
MAP1LC3A-203ENST00000397709 GAGE13Q4V321 117 aa13.53□□□□□ -0.24
MAP1LC3A-203ENST00000397709 RPL39LQ96EH5 51 aaKnown RBP13.53□□□□□ -0.24
MAP1LC3A-203ENST00000397709 NIT2Q9NQR4 276 aa13.53□□□□□ -0.24
MAP1LC3A-203ENST00000397709 APLNQ9ULZ1 77 aa13.53□□□□□ -0.24
MAP1LC3A-203ENST00000397709 TRBV7-3A0A075B6L6 115 aa13.52□□□□□ -0.25
MAP1LC3A-203ENST00000397709 D6R8Y8 96 aa13.52□□□□□ -0.25
MAP1LC3A-203ENST00000397709 APCSP02743 223 aa13.52□□□□□ -0.25
MAP1LC3A-203ENST00000397709 PPBPP02775 128 aa13.52□□□□□ -0.25
MAP1LC3A-203ENST00000397709 CKS2P33552 79 aa13.52□□□□□ -0.25
MAP1LC3A-203ENST00000397709 RPS10P46783 165 aaKnown RBP13.52□□□□□ -0.25
MAP1LC3A-203ENST00000397709 RPL36AP83881 106 aaKnown RBP13.52□□□□□ -0.25
MAP1LC3A-203ENST00000397709 CASC10Q5T4H9 136 aa13.52□□□□□ -0.25
MAP1LC3A-203ENST00000397709 NRACQ8N912 160 aa13.52□□□□□ -0.25
MAP1LC3A-203ENST00000397709 ZNRF2Q8NHG8 242 aa13.52□□□□□ -0.25
MAP1LC3A-203ENST00000397709 RPL36ALQ969Q0 106 aaKnown RBP13.52□□□□□ -0.25
MAP1LC3A-203ENST00000397709 SRIP30626 198 aa13.51□□□□□ -0.25
MAP1LC3A-203ENST00000397709 UBE2D3P61077 147 aa13.51□□□□□ -0.25
MAP1LC3A-203ENST00000397709 UBE2D2P62837 147 aa13.51□□□□□ -0.25
MAP1LC3A-203ENST00000397709 OR10J3Q5JRS4 329 aa13.51□□□□□ -0.25
MAP1LC3A-203ENST00000397709 MRPL18Q9H0U6 180 aaKnown RBP13.51□□□□□ -0.25
MAP1LC3A-203ENST00000397709 TRBV6-5A0A0K0K1A5 114 aa13.5□□□□□ -0.25
MAP1LC3A-203ENST00000397709 ORMDL3Q8N138 153 aa13.5□□□□□ -0.25
MAP1LC3A-203ENST00000397709 TRAPPC1Q9Y5R8 145 aa13.5□□□□□ -0.25
MAP1LC3A-203ENST00000397709 TNFRSF18Q9Y5U5 241 aa13.5□□□□□ -0.25
MAP1LC3A-203ENST00000397709 PPP1R17O96001 155 aa13.49□□□□□ -0.25
MAP1LC3A-203ENST00000397709 SH2D6Q7Z4S9 175 aa13.49□□□□□ -0.25
MAP1LC3A-203ENST00000397709 FABP9Q0Z7S8 132 aa13.48□□□□□ -0.25
MAP1LC3A-203ENST00000397709 KIAA1644Q3SXP7 199 aa13.48□□□□□ -0.25
MAP1LC3A-203ENST00000397709 NEGR1Q7Z3B1 354 aa13.48□□□□□ -0.25
MAP1LC3A-203ENST00000397709 PRELID3AQ96N28 172 aa13.48□□□□□ -0.25
MAP1LC3A-203ENST00000397709 PHOX2AO14813 284 aa13.47□□□□□ -0.25
MAP1LC3A-203ENST00000397709 TNFRSF6BO95407 300 aa13.47□□□□□ -0.25
MAP1LC3A-203ENST00000397709 NPYP01303 97 aa13.47□□□□□ -0.25
MAP1LC3A-203ENST00000397709 RAB5AP20339 215 aa13.47□□□□□ -0.25
MAP1LC3A-203ENST00000397709 ATP6V0E2Q8NHE4 81 aa13.47□□□□□ -0.25
MAP1LC3A-203ENST00000397709 ST20Q9HBF5 79 aa13.47□□□□□ -0.25
MAP1LC3A-203ENST00000397709 LAMTOR2Q9Y2Q5 125 aa13.47□□□□□ -0.25
MAP1LC3A-203ENST00000397709 SDHAF1A6NFY7 115 aa13.45□□□□□ -0.26
MAP1LC3A-203ENST00000397709 SUMO2P61956 95 aaKnown RBP13.45□□□□□ -0.26
MAP1LC3A-203ENST00000397709 DAZ4Q86SG3 579 aaKnown RBP13.45□□□□□ -0.26
MAP1LC3A-203ENST00000397709 C20orf78Q9BR46 151 aa13.45□□□□□ -0.26
MAP1LC3A-203ENST00000397709 TMEM70Q9BUB7 260 aa13.45□□□□□ -0.26
MAP1LC3A-203ENST00000397709 DAZ3Q9NR90 486 aaKnown RBP13.45□□□□□ -0.26
MAP1LC3A-203ENST00000397709 POLR2KP53803 58 aaKnown RBP13.44□□□□□ -0.26
MAP1LC3A-203ENST00000397709 TIRAPP58753 221 aa13.44□□□□□ -0.26
MAP1LC3A-203ENST00000397709 LYPD5Q6UWN5 251 aa13.44□□□□□ -0.26
MAP1LC3A-203ENST00000397709 ALKBH7Q9BT30 221 aaPredicted RBP13.44□□□□□ -0.26
MAP1LC3A-203ENST00000397709 GTSF1LQ9H1H1 148 aa13.44□□□□□ -0.26
MAP1LC3A-203ENST00000397709 TENM2Q9NT68 2774 aa13.44□□□□□ -0.26
MAP1LC3A-203ENST00000397709 LYSTQ99698 3801 aa13.44□□□□□ -0.26
MAP1LC3A-203ENST00000397709 ALMS1Q8TCU4 4167 aa13.43□□□□□ -0.26
MAP1LC3A-203ENST00000397709 IGHV3-38A0A0C4DH36 116 aa13.43□□□□□ -0.26
MAP1LC3A-203ENST00000397709 RPL32P62910 135 aaKnown RBP13.43□□□□□ -0.26
MAP1LC3A-203ENST00000397709 ESRGQ1W209 222 aa13.43□□□□□ -0.26
MAP1LC3A-203ENST00000397709 VPS13DQ5THJ4 4388 aa13.42□□□□□ -0.26
MAP1LC3A-203ENST00000397709 PRSS47A8MTI9 375 aa13.42□□□□□ -0.26
MAP1LC3A-203ENST00000397709 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.42□□□□□ -0.26
MAP1LC3A-203ENST00000397709 TRBV27A0A0K0K1C4 114 aa13.41□□□□□ -0.26
MAP1LC3A-203ENST00000397709 TRGC2P03986 189 aa13.41□□□□□ -0.26
MAP1LC3A-203ENST00000397709 I3L3M4 83 aa13.4□□□□□ -0.26
MAP1LC3A-203ENST00000397709 VCYO14598 125 aa13.4□□□□□ -0.26
MAP1LC3A-203ENST00000397709 SMIM2Q9BVW6 85 aa13.4□□□□□ -0.26
MAP1LC3A-203ENST00000397709 MAP1LC3AQ9H492 121 aa13.4□□□□□ -0.26
MAP1LC3A-203ENST00000397709 LINC00588Q9Y4M8 146 aa13.4□□□□□ -0.26
MAP1LC3A-203ENST00000397709 DNAH1Q9P2D7 4330 aa13.4□□□□□ -0.27
MAP1LC3A-203ENST00000397709 CCL18P55774 89 aa13.39□□□□□ -0.27
MAP1LC3A-203ENST00000397709 TMEM97Q5BJF2 176 aa13.39□□□□□ -0.27
MAP1LC3A-203ENST00000397709 PMCHP20382 165 aa13.38□□□□□ -0.27
MAP1LC3A-203ENST00000397709 LELP1Q5T871 98 aa13.38□□□□□ -0.27
MAP1LC3A-203ENST00000397709 NTM-AS1Q6ZSK4 140 aa13.38□□□□□ -0.27
MAP1LC3A-203ENST00000397709 MRPS16Q9Y3D3 137 aaKnown RBP13.38□□□□□ -0.27
MAP1LC3A-203ENST00000397709 IGLV2-18A0A075B6J9 118 aa13.37□□□□□ -0.27
MAP1LC3A-203ENST00000397709 LOC389332A0A1B0GUA5 103 aa13.37□□□□□ -0.27
MAP1LC3A-203ENST00000397709 TSHBP01222 138 aa13.37□□□□□ -0.27
MAP1LC3A-203ENST00000397709 COTL1Q14019 142 aa13.37□□□□□ -0.27
MAP1LC3A-203ENST00000397709 TRBV6-8A0A0A6YYG3 113 aa13.36□□□□□ -0.27
MAP1LC3A-203ENST00000397709 Q8N8P6 123 aa13.36□□□□□ -0.27
MAP1LC3A-203ENST00000397709 DEFB104AQ8WTQ1 72 aa13.36□□□□□ -0.27
MAP1LC3A-203ENST00000397709 IQCJQ1A5X6 159 aa13.35□□□□□ -0.27
MAP1LC3A-203ENST00000397709 LGALS9CQ6DKI2 356 aa13.35□□□□□ -0.27
MAP1LC3A-203ENST00000397709 UBE2DNLQ8IWF7 75 aa13.35□□□□□ -0.27
MAP1LC3A-203ENST00000397709 C18orf32Q8TCD1 76 aa13.35□□□□□ -0.27
MAP1LC3A-203ENST00000397709 KIR2DL4Q99706 377 aa13.35□□□□□ -0.27
MAP1LC3A-203ENST00000397709 UPK3BQ9BT76 320 aa13.35□□□□□ -0.27
MAP1LC3A-203ENST00000397709 IGHV1-24A0A0C4DH33 117 aa13.34□□□□□ -0.27
MAP1LC3A-203ENST00000397709 TRBV25-1A0A075B6N4 114 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms