RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 ELANEP08246 267 aa7.78□□□□□ -1.16
CPSF1P1-201ENST00000397477 LGALS3P17931 250 aaKnown RBP7.78□□□□□ -1.16
CPSF1P1-201ENST00000397477 NPC2P61916 151 aa7.78□□□□□ -1.16
CPSF1P1-201ENST00000397477 Q1RN00 199 aa7.78□□□□□ -1.16
CPSF1P1-201ENST00000397477 ZNF479Q96JC4 524 aa7.78□□□□□ -1.16
CPSF1P1-201ENST00000397477 IGKV3OR2-268A0A0C4DH90 116 aa7.77□□□□□ -1.17
CPSF1P1-201ENST00000397477 LINC01619G3V211 115 aa7.77□□□□□ -1.17
CPSF1P1-201ENST00000397477 DLX4Q92988 240 aaPredicted RBP7.77□□□□□ -1.17
CPSF1P1-201ENST00000397477 PSMG3-AS1Q96PY0 264 aa7.77□□□□□ -1.17
CPSF1P1-201ENST00000397477 VCX2Q9H322 139 aa7.77□□□□□ -1.17
CPSF1P1-201ENST00000397477 A0A0U1RRA0 63 aa7.77□□□□□ -1.17
CPSF1P1-201ENST00000397477 A0A1B0GV72 72 aa7.77□□□□□ -1.17
CPSF1P1-201ENST00000397477 K7EQG2 157 aa7.77□□□□□ -1.17
CPSF1P1-201ENST00000397477 ADAMTSL5Q6ZMM2 481 aa7.77□□□□□ -1.17
CPSF1P1-201ENST00000397477 SPXQ9BT56 116 aa7.77□□□□□ -1.17
CPSF1P1-201ENST00000397477 CFHR3Q02985 330 aa7.77□□□□□ -1.17
CPSF1P1-201ENST00000397477 NSUN5P1Q3KNT7 163 aa7.77□□□□□ -1.17
CPSF1P1-201ENST00000397477 ZNF702PQ9H963 129 aa7.77□□□□□ -1.17
CPSF1P1-201ENST00000397477 PEMTQ9UBM1 199 aa7.77□□□□□ -1.17
CPSF1P1-201ENST00000397477 MYMXA0A1B0GTQ4 84 aa7.76□□□□□ -1.17
CPSF1P1-201ENST00000397477 C11orf86A6NJI1 115 aa7.76□□□□□ -1.17
CPSF1P1-201ENST00000397477 J3QLI3 93 aa7.76□□□□□ -1.17
CPSF1P1-201ENST00000397477 CRIP2P52943 208 aaPredicted RBP7.76□□□□□ -1.17
CPSF1P1-201ENST00000397477 CEND1Q8N111 149 aa7.76□□□□□ -1.17
CPSF1P1-201ENST00000397477 TOMM6Q96B49 74 aa7.76□□□□□ -1.17
CPSF1P1-201ENST00000397477 ATP6V0BQ99437 205 aa7.76□□□□□ -1.17
CPSF1P1-201ENST00000397477 MUC4Q99102 2169 aa7.76□□□□□ -1.17
CPSF1P1-201ENST00000397477 A0A1W2PPM0 123 aa7.76□□□□□ -1.17
CPSF1P1-201ENST00000397477 CD28P10747 220 aa7.76□□□□□ -1.17
CPSF1P1-201ENST00000397477 RPL35AP18077 110 aaKnown RBP7.76□□□□□ -1.17
CPSF1P1-201ENST00000397477 Q6YL49 198 aa7.76□□□□□ -1.17
CPSF1P1-201ENST00000397477 STHQ8IWL8 128 aa7.76□□□□□ -1.17
CPSF1P1-201ENST00000397477 ZNF418Q8TF45 676 aaPredicted RBP7.76□□□□□ -1.17
CPSF1P1-201ENST00000397477 TRGV11A0A075B6L2 103 aa7.75□□□□□ -1.17
CPSF1P1-201ENST00000397477 TRAV2A0A0B4J234 112 aa7.75□□□□□ -1.17
CPSF1P1-201ENST00000397477 KLLNB2CW77 178 aa7.75□□□□□ -1.17
CPSF1P1-201ENST00000397477 TRGV1A0A0A0MS02 117 aa7.75□□□□□ -1.17
CPSF1P1-201ENST00000397477 SVIPQ8NHG7 77 aa7.75□□□□□ -1.17
CPSF1P1-201ENST00000397477 H3BMG7 143 aa7.75□□□□□ -1.17
CPSF1P1-201ENST00000397477 PSMB2P49721 201 aa7.75□□□□□ -1.17
CPSF1P1-201ENST00000397477 PMVKQ15126 192 aa7.75□□□□□ -1.17
CPSF1P1-201ENST00000397477 PLEKHB2Q96CS7 222 aa7.75□□□□□ -1.17
CPSF1P1-201ENST00000397477 FOXI2Q6ZQN5 318 aa7.74□□□□□ -1.17
CPSF1P1-201ENST00000397477 PGPEP1Q9NXJ5 209 aa7.74□□□□□ -1.17
CPSF1P1-201ENST00000397477 IGHV4-4A0A075B6R2 117 aa7.74□□□□□ -1.17
CPSF1P1-201ENST00000397477 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.74□□□□□ -1.17
CPSF1P1-201ENST00000397477 IGKV2-29A2NJV5 120 aaPredicted RBP7.74□□□□□ -1.17
CPSF1P1-201ENST00000397477 A0A0J9YXV3 536 aa7.74□□□□□ -1.17
CPSF1P1-201ENST00000397477 SIVA1O15304 175 aa7.74□□□□□ -1.17
CPSF1P1-201ENST00000397477 K7EP34 96 aa7.73□□□□□ -1.17
CPSF1P1-201ENST00000397477 C12orf74Q32Q52 190 aa7.73□□□□□ -1.17
CPSF1P1-201ENST00000397477 TRPT1Q86TN4 253 aaKnown RBP7.73□□□□□ -1.17
CPSF1P1-201ENST00000397477 NEXN-AS1Q8NBZ9 246 aa7.73□□□□□ -1.17
CPSF1P1-201ENST00000397477 ITPR2Q14571 2701 aa7.73□□□□□ -1.17
CPSF1P1-201ENST00000397477 LINC01549A6NIU2 74 aa7.73□□□□□ -1.17
CPSF1P1-201ENST00000397477 AZU1P20160 251 aa7.72□□□□□ -1.17
CPSF1P1-201ENST00000397477 Q9UF83 564 aa7.72□□□□□ -1.17
CPSF1P1-201ENST00000397477 I3L3M4 83 aa7.72□□□□□ -1.17
CPSF1P1-201ENST00000397477 ZNF625Q96I27 306 aaPredicted RBP7.72□□□□□ -1.17
CPSF1P1-201ENST00000397477 A0A1B0GWB2 263 aa7.71□□□□□ -1.17
CPSF1P1-201ENST00000397477 CRYGDP07320 174 aa7.71□□□□□ -1.17
CPSF1P1-201ENST00000397477 SPAG8Q99932 426 aaPredicted RBP7.71□□□□□ -1.17
CPSF1P1-201ENST00000397477 GEMIN7Q9H840 131 aaKnown RBP7.71□□□□□ -1.17
CPSF1P1-201ENST00000397477 ETDBQ3ZM63 59 aa7.71□□□□□ -1.18
CPSF1P1-201ENST00000397477 TMEM238LA0A1B0GVL6 79 aa7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 A6NJY4 79 aa7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 M0QY20 66 aa7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 ZNF415Q09FC8 603 aa7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 SH2D6Q7Z4S9 175 aa7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 SIGMAR1Q99720 223 aa7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 TEP1Q99973 2627 aaKnown RBP7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 APCP25054 2843 aa7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 H3BMM0 161 aa7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 RBMY1A1P0DJD3 496 aaKnown RBP7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 RBMY1CP0DJD4 496 aa7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 RBMY1FQ15415 496 aaKnown RBP7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 CITED2Q99967 270 aaPredicted RBP7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 WFDC10AQ9H1F0 79 aa7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 TRGV2A0A075B6R0 118 aa7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 IGLL5B9A064 214 aa7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 CKS1BP61024 79 aa7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 KLK9Q2XQG4 91 aa7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 Q6ZSV7 163 aa7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 ZMAT4Q9H898 229 aa7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 SETXQ7Z333 2677 aaKnown RBP7.7□□□□□ -1.18
CPSF1P1-201ENST00000397477 TRAV12-1A0A0B4J245 112 aa7.69□□□□□ -1.18
CPSF1P1-201ENST00000397477 DNAJC9-AS1A6NH13 148 aa7.69□□□□□ -1.18
CPSF1P1-201ENST00000397477 INSP01308 110 aa7.69□□□□□ -1.18
CPSF1P1-201ENST00000397477 ZNRF2Q8NHG8 242 aa7.69□□□□□ -1.18
CPSF1P1-201ENST00000397477 MAP6D1Q9H9H5 199 aa7.69□□□□□ -1.18
CPSF1P1-201ENST00000397477 J3QQQ9 107 aa7.69□□□□□ -1.18
CPSF1P1-201ENST00000397477 J3QR89 54 aa7.69□□□□□ -1.18
CPSF1P1-201ENST00000397477 CCL24O00175 119 aa7.69□□□□□ -1.18
CPSF1P1-201ENST00000397477 MED14OSP0DP75 135 aa7.69□□□□□ -1.18
CPSF1P1-201ENST00000397477 POLR2KP53803 58 aaKnown RBP7.69□□□□□ -1.18
CPSF1P1-201ENST00000397477 LINC00315P59091 139 aa7.69□□□□□ -1.18
CPSF1P1-201ENST00000397477 WFDC2Q14508 124 aa7.69□□□□□ -1.18
CPSF1P1-201ENST00000397477 NBEAL2Q6ZNJ1 2754 aa7.69□□□□□ -1.18
CPSF1P1-201ENST00000397477 TRAV8-3A0A0A6YYJ7 113 aa7.69□□□□□ -1.18
CPSF1P1-201ENST00000397477 KIF25-AS1Q9Y6Z4 181 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms