RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 MAP1LC3AQ9H492 121 aa16.59■□□□□ 0.25
TSPAN4-202ENST00000397396 ST20Q9HBF5 79 aa16.59■□□□□ 0.25
TSPAN4-202ENST00000397396 TNFRSF18Q9Y5U5 241 aa16.59■□□□□ 0.25
TSPAN4-202ENST00000397396 TENM3Q9P273 2699 aa16.59■□□□□ 0.25
TSPAN4-202ENST00000397396 DEFB131BA0A096LNP1 70 aa16.58■□□□□ 0.24
TSPAN4-202ENST00000397396 NPYP01303 97 aa16.58■□□□□ 0.24
TSPAN4-202ENST00000397396 H3BNG1 76 aa16.57■□□□□ 0.24
TSPAN4-202ENST00000397396 SUMO2P61956 95 aaKnown RBP16.57■□□□□ 0.24
TSPAN4-202ENST00000397396 RPL39LQ96EH5 51 aaKnown RBP16.57■□□□□ 0.24
TSPAN4-202ENST00000397396 PRKDCP78527 4128 aaKnown RBP16.56■□□□□ 0.24
TSPAN4-202ENST00000397396 RPL32P62910 135 aaKnown RBP16.56■□□□□ 0.24
TSPAN4-202ENST00000397396 NEXN-AS1Q8NBZ9 246 aa16.56■□□□□ 0.24
TSPAN4-202ENST00000397396 TRBV7-3A0A075B6L6 115 aa16.55■□□□□ 0.24
TSPAN4-202ENST00000397396 PRSS47A8MTI9 375 aa16.55■□□□□ 0.24
TSPAN4-202ENST00000397396 TRAV26-1A0A087WT03 109 aa16.54■□□□□ 0.24
TSPAN4-202ENST00000397396 HIST1H2BKO60814 126 aa16.54■□□□□ 0.24
TSPAN4-202ENST00000397396 GAS8-AS1O95177 125 aa16.54■□□□□ 0.24
TSPAN4-202ENST00000397396 HIST1H2BJP06899 126 aa16.54■□□□□ 0.24
TSPAN4-202ENST00000397396 HIST1H2BOP23527 126 aa16.54■□□□□ 0.24
TSPAN4-202ENST00000397396 HIST1H2BBP33778 126 aa16.54■□□□□ 0.24
TSPAN4-202ENST00000397396 HIST1H2BDP58876 126 aa16.54■□□□□ 0.24
TSPAN4-202ENST00000397396 HIST1H2BCP62807 126 aa16.54■□□□□ 0.24
TSPAN4-202ENST00000397396 HIST2H2BEQ16778 126 aa16.54■□□□□ 0.24
TSPAN4-202ENST00000397396 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.54■□□□□ 0.24
TSPAN4-202ENST00000397396 C18orf32Q8TCD1 76 aa16.54■□□□□ 0.24
TSPAN4-202ENST00000397396 HIST1H2BHQ93079 126 aa16.54■□□□□ 0.24
TSPAN4-202ENST00000397396 HIST1H2BNQ99877 126 aa16.54■□□□□ 0.24
TSPAN4-202ENST00000397396 HIST1H2BMQ99879 126 aa16.54■□□□□ 0.24
TSPAN4-202ENST00000397396 NXT2Q9NPJ8 142 aaKnown RBP16.54■□□□□ 0.24
TSPAN4-202ENST00000397396 SDHAF1A6NFY7 115 aa16.53■□□□□ 0.24
TSPAN4-202ENST00000397396 P0DMU3 169 aa16.53■□□□□ 0.24
TSPAN4-202ENST00000397396 FAM231AP0DMU4 169 aa16.53■□□□□ 0.24
TSPAN4-202ENST00000397396 FAM231CP0DMU5 169 aa16.53■□□□□ 0.24
TSPAN4-202ENST00000397396 PMCHP20382 165 aa16.53■□□□□ 0.24
TSPAN4-202ENST00000397396 SH2D6Q7Z4S9 175 aa16.53■□□□□ 0.24
TSPAN4-202ENST00000397396 GYPEP15421 78 aa16.52■□□□□ 0.24
TSPAN4-202ENST00000397396 Q0VG73 95 aa16.52■□□□□ 0.24
TSPAN4-202ENST00000397396 ZNRF2Q8NHG8 242 aa16.52■□□□□ 0.24
TSPAN4-202ENST00000397396 SMIM2Q9BVW6 85 aa16.52■□□□□ 0.24
TSPAN4-202ENST00000397396 VCYO14598 125 aa16.51■□□□□ 0.23
TSPAN4-202ENST00000397396 TCAPO15273 167 aa16.51■□□□□ 0.23
TSPAN4-202ENST00000397396 DAZ4Q86SG3 579 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-202ENST00000397396 VSIG2Q96IQ7 327 aa16.51■□□□□ 0.23
TSPAN4-202ENST00000397396 TMEM70Q9BUB7 260 aa16.51■□□□□ 0.23
TSPAN4-202ENST00000397396 DAZ3Q9NR90 486 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-202ENST00000397396 ICOSQ9Y6W8 199 aa16.51■□□□□ 0.23
TSPAN4-202ENST00000397396 A0A0J9YY99 117 aa16.5■□□□□ 0.23
TSPAN4-202ENST00000397396 GAGE12JA6NER3 117 aa16.5■□□□□ 0.23
TSPAN4-202ENST00000397396 POLR2KP53803 58 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-202ENST00000397396 GAGE1Q13065 139 aa16.5■□□□□ 0.23
TSPAN4-202ENST00000397396 GAGE4Q13068 117 aa16.5■□□□□ 0.23
TSPAN4-202ENST00000397396 GAGE5Q13069 117 aa16.5■□□□□ 0.23
TSPAN4-202ENST00000397396 MRPL23Q16540 153 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-202ENST00000397396 GAGE13Q4V321 117 aa16.5■□□□□ 0.23
TSPAN4-202ENST00000397396 BAGE3Q86Y29 109 aa16.5■□□□□ 0.23
TSPAN4-202ENST00000397396 PRSS3P2Q8NHM4 247 aa16.5■□□□□ 0.23
TSPAN4-202ENST00000397396 PHLDA1Q8WV24 401 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-202ENST00000397396 TRBV27A0A0K0K1C4 114 aa16.49■□□□□ 0.23
TSPAN4-202ENST00000397396 K7EMI3 77 aa16.49■□□□□ 0.23
TSPAN4-202ENST00000397396 UBE2D3P61077 147 aa16.49■□□□□ 0.23
TSPAN4-202ENST00000397396 UBE2D2P62837 147 aa16.49■□□□□ 0.23
TSPAN4-202ENST00000397396 Q8N8P6 123 aa16.49■□□□□ 0.23
TSPAN4-202ENST00000397396 KIR2DL4Q99706 377 aa16.49■□□□□ 0.23
TSPAN4-202ENST00000397396 LOC389332A0A1B0GUA5 103 aa16.48■□□□□ 0.23
TSPAN4-202ENST00000397396 I3L3M4 83 aa16.48■□□□□ 0.23
TSPAN4-202ENST00000397396 LINC00694P0DN24 101 aa16.48■□□□□ 0.23
TSPAN4-202ENST00000397396 FA2HQ7L5A8 372 aa16.48■□□□□ 0.23
TSPAN4-202ENST00000397396 IQCJQ1A5X6 159 aa16.47■□□□□ 0.23
TSPAN4-202ENST00000397396 TMEM97Q5BJF2 176 aa16.47■□□□□ 0.23
TSPAN4-202ENST00000397396 C15orf53Q8NAA6 179 aa16.47■□□□□ 0.23
TSPAN4-202ENST00000397396 LOC100131303A0A0U1RQF7 123 aa16.46■□□□□ 0.23
TSPAN4-202ENST00000397396 NUPR2A6NF83 97 aa16.45■□□□□ 0.22
TSPAN4-202ENST00000397396 CHCHD1Q96BP2 118 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-202ENST00000397396 Q9UF83 564 aa16.45■□□□□ 0.22
TSPAN4-202ENST00000397396 STAB2Q8WWQ8 2551 aa16.45■□□□□ 0.22
TSPAN4-202ENST00000397396 S100A6P06703 90 aa16.45■□□□□ 0.22
TSPAN4-202ENST00000397396 FCER1GP30273 86 aa16.45■□□□□ 0.22
TSPAN4-202ENST00000397396 IFI27P40305 119 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-202ENST00000397396 COTL1Q14019 142 aa16.45■□□□□ 0.22
TSPAN4-202ENST00000397396 ATP6V0E2Q8NHE4 81 aa16.45■□□□□ 0.22
TSPAN4-202ENST00000397396 IGLV2-18A0A075B6J9 118 aa16.44■□□□□ 0.22
TSPAN4-202ENST00000397396 LINC00614P0C842 121 aa16.44■□□□□ 0.22
TSPAN4-202ENST00000397396 AP5S1Q9NUS5 200 aa16.44■□□□□ 0.22
TSPAN4-202ENST00000397396 ORMDL2Q53FV1 153 aa16.43■□□□□ 0.22
TSPAN4-202ENST00000397396 COA6Q5JTJ3 125 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-202ENST00000397396 NEGR1Q7Z3B1 354 aa16.43■□□□□ 0.22
TSPAN4-202ENST00000397396 NIT1Q86X76 327 aa16.43■□□□□ 0.22
TSPAN4-202ENST00000397396 KLK5Q9Y337 293 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-202ENST00000397396 LINC01546A6NGU7 62 aa16.42■□□□□ 0.22
TSPAN4-202ENST00000397396 RNASEKQ6P5S7 137 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-202ENST00000397396 CEMP1Q6PRD7 247 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-202ENST00000397396 A0A096LPF7 62 aa16.41■□□□□ 0.22
TSPAN4-202ENST00000397396 G0S2P27469 103 aa16.41■□□□□ 0.22
TSPAN4-202ENST00000397396 NDUFA6P56556 154 aa16.41■□□□□ 0.22
TSPAN4-202ENST00000397396 GTSF1LQ9H1H1 148 aa16.41■□□□□ 0.22
TSPAN4-202ENST00000397396 NUDT3O95989 172 aa16.4■□□□□ 0.22
TSPAN4-202ENST00000397396 LAGE3Q14657 143 aa16.4■□□□□ 0.22
TSPAN4-202ENST00000397396 TGP01266 2768 aa16.39■□□□□ 0.21
TSPAN4-202ENST00000397396 IGHV3-38A0A0C4DH36 116 aa16.39■□□□□ 0.21
TSPAN4-202ENST00000397396 IGLL5B9A064 214 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms