RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 ZNF56Q15929 161 aa9.53□□□□□ -0.88
SEC13-205ENST00000397101 COX19Q49B96 90 aa9.53□□□□□ -0.88
SEC13-205ENST00000397101 CFAP126Q5VTH2 177 aa9.53□□□□□ -0.88
SEC13-205ENST00000397101 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.53□□□□□ -0.88
SEC13-205ENST00000397101 TRBV24-1A0A075B6N3 115 aa9.52□□□□□ -0.89
SEC13-205ENST00000397101 NBDYA0A0U1RRE5 68 aa9.52□□□□□ -0.89
SEC13-205ENST00000397101 A0A1B0GXF2 115 aa9.52□□□□□ -0.89
SEC13-205ENST00000397101 RHODO00212 210 aa9.52□□□□□ -0.89
SEC13-205ENST00000397101 ATP5G1P05496 136 aa9.52□□□□□ -0.89
SEC13-205ENST00000397101 RASL11AQ6T310 242 aa9.52□□□□□ -0.89
SEC13-205ENST00000397101 FRZBQ92765 325 aa9.52□□□□□ -0.89
SEC13-205ENST00000397101 SAMD10Q9BYL1 202 aa9.52□□□□□ -0.89
SEC13-205ENST00000397101 TMEM191AQ9H0A3 160 aa9.52□□□□□ -0.89
SEC13-205ENST00000397101 VPS13BQ7Z7G8 4022 aa9.52□□□□□ -0.89
SEC13-205ENST00000397101 LINC00612Q8N6U2 182 aa9.51□□□□□ -0.89
SEC13-205ENST00000397101 ZNF479Q96JC4 524 aa9.51□□□□□ -0.89
SEC13-205ENST00000397101 F5H768 121 aa9.5□□□□□ -0.89
SEC13-205ENST00000397101 CIDEAO60543 219 aa9.5□□□□□ -0.89
SEC13-205ENST00000397101 CRYGDP07320 174 aa9.5□□□□□ -0.89
SEC13-205ENST00000397101 RPS10P46783 165 aaKnown RBP9.5□□□□□ -0.89
SEC13-205ENST00000397101 AMN1Q8IY45 258 aa9.5□□□□□ -0.89
SEC13-205ENST00000397101 ZNRF2Q8NHG8 242 aa9.5□□□□□ -0.89
SEC13-205ENST00000397101 TRAPPC1Q9Y5R8 145 aa9.5□□□□□ -0.89
SEC13-205ENST00000397101 HLA-DQA1P01909 254 aa9.49□□□□□ -0.89
SEC13-205ENST00000397101 APCSP02743 223 aa9.49□□□□□ -0.89
SEC13-205ENST00000397101 FABP9Q0Z7S8 132 aa9.49□□□□□ -0.89
SEC13-205ENST00000397101 ZFP2Q6ZN57 461 aa9.49□□□□□ -0.89
SEC13-205ENST00000397101 TMEM136Q6ZRR5 245 aa9.49□□□□□ -0.89
SEC13-205ENST00000397101 YPEL4Q96NS1 127 aa9.49□□□□□ -0.89
SEC13-205ENST00000397101 GNB1LQ9BYB4 327 aa9.49□□□□□ -0.89
SEC13-205ENST00000397101 COLCA2A8K830 154 aa9.48□□□□□ -0.89
SEC13-205ENST00000397101 MT-ND6P03923 174 aa9.48□□□□□ -0.89
SEC13-205ENST00000397101 RAB4AP20338 218 aa9.48□□□□□ -0.89
SEC13-205ENST00000397101 FAM104BQ5XKR9 115 aa9.48□□□□□ -0.89
SEC13-205ENST00000397101 C18orf15Q96N68 181 aa9.48□□□□□ -0.89
SEC13-205ENST00000397101 MRPL18Q9H0U6 180 aaKnown RBP9.48□□□□□ -0.89
SEC13-205ENST00000397101 KIF25-AS1Q9Y6Z4 181 aa9.48□□□□□ -0.89
SEC13-205ENST00000397101 RAB5AP20339 215 aa9.47□□□□□ -0.89
SEC13-205ENST00000397101 CKS2P33552 79 aa9.47□□□□□ -0.89
SEC13-205ENST00000397101 MRPL51Q4U2R6 128 aaKnown RBP9.47□□□□□ -0.89
SEC13-205ENST00000397101 SPATA12Q7Z6I5 190 aa9.47□□□□□ -0.89
SEC13-205ENST00000397101 GATD1Q8NB37 220 aa9.47□□□□□ -0.89
SEC13-205ENST00000397101 DMBT1Q9UGM3 2413 aaPredicted RBP9.47□□□□□ -0.89
SEC13-205ENST00000397101 TRAV26-2A0A0B4J265 109 aa9.46□□□□□ -0.9
SEC13-205ENST00000397101 H7C1H1 209 aa9.46□□□□□ -0.9
SEC13-205ENST00000397101 BTF3P20290 206 aaKnown RBP9.46□□□□□ -0.9
SEC13-205ENST00000397101 SLAQ13239 276 aa9.46□□□□□ -0.9
SEC13-205ENST00000397101 FHL2Q14192 279 aa9.46□□□□□ -0.9
SEC13-205ENST00000397101 KIAA1644Q3SXP7 199 aa9.46□□□□□ -0.9
SEC13-205ENST00000397101 SUMO4Q6EEV6 95 aa9.46□□□□□ -0.9
SEC13-205ENST00000397101 RNF185Q96GF1 192 aa9.46□□□□□ -0.9
SEC13-205ENST00000397101 PRADC1Q9BSG0 188 aa9.46□□□□□ -0.9
SEC13-205ENST00000397101 HHLA3Q9XRX5 114 aa9.46□□□□□ -0.9
SEC13-205ENST00000397101 A0A0J9YY99 117 aa9.45□□□□□ -0.9
SEC13-205ENST00000397101 EPM2AB3EWF7 344 aa9.45□□□□□ -0.9
SEC13-205ENST00000397101 SMKR1H3BMG3 65 aa9.45□□□□□ -0.9
SEC13-205ENST00000397101 PAX4O43316 350 aa9.45□□□□□ -0.9
SEC13-205ENST00000397101 NCR2O95944 276 aa9.45□□□□□ -0.9
SEC13-205ENST00000397101 HOXA5P20719 270 aa9.45□□□□□ -0.9
SEC13-205ENST00000397101 CCL18P55774 89 aa9.45□□□□□ -0.9
SEC13-205ENST00000397101 UFSP1Q6NVU6 142 aa9.45□□□□□ -0.9
SEC13-205ENST00000397101 MRAP2Q96G30 205 aa9.45□□□□□ -0.9
SEC13-205ENST00000397101 PRO0255Q9UI72 69 aa9.45□□□□□ -0.9
SEC13-205ENST00000397101 D6R8Y8 96 aa9.44□□□□□ -0.9
SEC13-205ENST00000397101 K7EQD1 137 aa9.44□□□□□ -0.9
SEC13-205ENST00000397101 GATA1P15976 413 aaPredicted RBP9.44□□□□□ -0.9
SEC13-205ENST00000397101 LINC00315P59091 139 aa9.44□□□□□ -0.9
SEC13-205ENST00000397101 Q6ZSN1 163 aa9.44□□□□□ -0.9
SEC13-205ENST00000397101 PPBPP02775 128 aa9.43□□□□□ -0.9
SEC13-205ENST00000397101 TRGC2P03986 189 aa9.43□□□□□ -0.9
SEC13-205ENST00000397101 RHOHQ15669 191 aa9.43□□□□□ -0.9
SEC13-205ENST00000397101 OR10J3Q5JRS4 329 aa9.43□□□□□ -0.9
SEC13-205ENST00000397101 ORMDL3Q8N138 153 aa9.43□□□□□ -0.9
SEC13-205ENST00000397101 SLC25A29Q8N8R3 303 aa9.43□□□□□ -0.9
SEC13-205ENST00000397101 PRELID3AQ96N28 172 aa9.43□□□□□ -0.9
SEC13-205ENST00000397101 TNFRSF18Q9Y5U5 241 aa9.43□□□□□ -0.9
SEC13-205ENST00000397101 TRAV26-1A0A087WT03 109 aa9.42□□□□□ -0.9
SEC13-205ENST00000397101 TRBV6-4A0A1B0GX49 114 aa9.42□□□□□ -0.9
SEC13-205ENST00000397101 GAGE12JA6NER3 117 aa9.42□□□□□ -0.9
SEC13-205ENST00000397101 PPP1R17O96001 155 aa9.42□□□□□ -0.9
SEC13-205ENST00000397101 CRYBA4P53673 196 aa9.42□□□□□ -0.9
SEC13-205ENST00000397101 GAGE1Q13065 139 aa9.42□□□□□ -0.9
SEC13-205ENST00000397101 GAGE4Q13068 117 aa9.42□□□□□ -0.9
SEC13-205ENST00000397101 GAGE5Q13069 117 aa9.42□□□□□ -0.9
SEC13-205ENST00000397101 GAGE13Q4V321 117 aa9.42□□□□□ -0.9
SEC13-205ENST00000397101 TTC32Q5I0X7 151 aa9.42□□□□□ -0.9
SEC13-205ENST00000397101 LINC00588Q9Y4M8 146 aa9.42□□□□□ -0.9
SEC13-205ENST00000397101 M0QY20 66 aa9.41□□□□□ -0.9
SEC13-205ENST00000397101 INAFM2P0DMQ5 153 aa9.41□□□□□ -0.9
SEC13-205ENST00000397101 GYPEP15421 78 aa9.41□□□□□ -0.9
SEC13-205ENST00000397101 KRTAP10-2P60368 255 aa9.41□□□□□ -0.9
SEC13-205ENST00000397101 RPL36AP83881 106 aaKnown RBP9.41□□□□□ -0.9
SEC13-205ENST00000397101 RPL36ALQ969Q0 106 aaKnown RBP9.41□□□□□ -0.9
SEC13-205ENST00000397101 RPL39LQ96EH5 51 aaKnown RBP9.41□□□□□ -0.9
SEC13-205ENST00000397101 ST20Q9HBF5 79 aa9.41□□□□□ -0.9
SEC13-205ENST00000397101 NIT2Q9NQR4 276 aa9.41□□□□□ -0.9
SEC13-205ENST00000397101 TRBV10-1A0A0K0K1A3 114 aa9.4□□□□□ -0.9
SEC13-205ENST00000397101 LOC100131303A0A0U1RQF7 123 aa9.4□□□□□ -0.9
SEC13-205ENST00000397101 GAS8-AS1O95177 125 aa9.4□□□□□ -0.9
SEC13-205ENST00000397101 NUDT3O95989 172 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms