RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 PAM16Q9Y3D7 125 aa12.58□□□□□ -0.4
TNFSF13-205ENST00000396545 AGRNO00468 2067 aa12.58□□□□□ -0.4
TNFSF13-205ENST00000396545 NUPR2A6NF83 97 aa12.57□□□□□ -0.4
TNFSF13-205ENST00000396545 LINC00315P59091 139 aa12.57□□□□□ -0.4
TNFSF13-205ENST00000396545 NDUFAF3Q9BU61 184 aa12.57□□□□□ -0.4
TNFSF13-205ENST00000396545 MDFICQ9P1T7 246 aa12.57□□□□□ -0.4
TNFSF13-205ENST00000396545 KMT2AQ03164 3969 aa12.57□□□□□ -0.4
TNFSF13-205ENST00000396545 C20orf202A1L168 122 aa12.56□□□□□ -0.4
TNFSF13-205ENST00000396545 FXYD7P58549 80 aa12.56□□□□□ -0.4
TNFSF13-205ENST00000396545 KIR2DL5BQ8NHK3 375 aa12.56□□□□□ -0.4
TNFSF13-205ENST00000396545 LY6G6CO95867 125 aa12.56□□□□□ -0.4
TNFSF13-205ENST00000396545 RASL10AQ92737 203 aa12.56□□□□□ -0.4
TNFSF13-205ENST00000396545 FCER1GP30273 86 aa12.55□□□□□ -0.4
TNFSF13-205ENST00000396545 LINC01545Q5VT33 79 aa12.55□□□□□ -0.4
TNFSF13-205ENST00000396545 CEMP1Q6PRD7 247 aaPredicted RBP12.55□□□□□ -0.4
TNFSF13-205ENST00000396545 SYT8Q8NBV8 401 aa12.55□□□□□ -0.4
TNFSF13-205ENST00000396545 RNF183Q96D59 192 aa12.55□□□□□ -0.4
TNFSF13-205ENST00000396545 C20orf78Q9BR46 151 aa12.55□□□□□ -0.4
TNFSF13-205ENST00000396545 TRAV9-2A0A087WT02 112 aa12.54□□□□□ -0.4
TNFSF13-205ENST00000396545 SPATA45Q537H7 98 aa12.54□□□□□ -0.4
TNFSF13-205ENST00000396545 C14orf144Q96I85 54 aa12.54□□□□□ -0.4
TNFSF13-205ENST00000396545 MUC4Q99102 2169 aa12.54□□□□□ -0.4
TNFSF13-205ENST00000396545 PPP1R17O96001 155 aa12.53□□□□□ -0.4
TNFSF13-205ENST00000396545 MGPP08493 103 aa12.53□□□□□ -0.4
TNFSF13-205ENST00000396545 ATOH7Q8N100 152 aa12.53□□□□□ -0.4
TNFSF13-205ENST00000396545 LINC01587Q99440 93 aa12.53□□□□□ -0.4
TNFSF13-205ENST00000396545 SMIM2Q9BVW6 85 aa12.53□□□□□ -0.4
TNFSF13-205ENST00000396545 CBY3A6NI87 242 aa12.52□□□□□ -0.4
TNFSF13-205ENST00000396545 SMIM17P0DL12 118 aa12.52□□□□□ -0.4
TNFSF13-205ENST00000396545 RPL35AP18077 110 aaKnown RBP12.52□□□□□ -0.4
TNFSF13-205ENST00000396545 MIEN1Q9BRT3 115 aa12.52□□□□□ -0.4
TNFSF13-205ENST00000396545 JPT2Q9H910 190 aa12.52□□□□□ -0.4
TNFSF13-205ENST00000396545 XCL2Q9UBD3 114 aa12.52□□□□□ -0.4
TNFSF13-205ENST00000396545 GOLT1BQ9Y3E0 138 aa12.52□□□□□ -0.4
TNFSF13-205ENST00000396545 SUMO2P61956 95 aaKnown RBP12.52□□□□□ -0.41
TNFSF13-205ENST00000396545 TMEM208Q9BTX3 173 aa12.52□□□□□ -0.41
TNFSF13-205ENST00000396545 K7EMI3 77 aa12.51□□□□□ -0.41
TNFSF13-205ENST00000396545 RPL32P62910 135 aaKnown RBP12.51□□□□□ -0.41
TNFSF13-205ENST00000396545 CTAG1AP78358 180 aa12.51□□□□□ -0.41
TNFSF13-205ENST00000396545 PIK3CD-AS1Q5SR53 167 aa12.51□□□□□ -0.41
TNFSF13-205ENST00000396545 ZNF705AQ6ZN79 300 aaPredicted RBP12.51□□□□□ -0.41
TNFSF13-205ENST00000396545 IFI27L1Q96BM0 104 aa12.51□□□□□ -0.41
TNFSF13-205ENST00000396545 RPL39LQ96EH5 51 aaKnown RBP12.51□□□□□ -0.41
TNFSF13-205ENST00000396545 KLK5Q9Y337 293 aaPredicted RBP12.51□□□□□ -0.41
TNFSF13-205ENST00000396545 CRYGDP07320 174 aa12.5□□□□□ -0.41
TNFSF13-205ENST00000396545 ZNF415Q09FC8 603 aa12.5□□□□□ -0.41
TNFSF13-205ENST00000396545 LAGE3Q14657 143 aa12.5□□□□□ -0.41
TNFSF13-205ENST00000396545 LGALS9BQ3B8N2 356 aa12.5□□□□□ -0.41
TNFSF13-205ENST00000396545 MAJINQ3KP22 176 aa12.5□□□□□ -0.41
TNFSF13-205ENST00000396545 LGALS9CQ6DKI2 356 aa12.5□□□□□ -0.41
TNFSF13-205ENST00000396545 PTH2Q96A98 100 aa12.5□□□□□ -0.41
TNFSF13-205ENST00000396545 CSTL1Q9H114 145 aa12.5□□□□□ -0.41
TNFSF13-205ENST00000396545 SUMO4Q6EEV6 95 aa12.49□□□□□ -0.41
TNFSF13-205ENST00000396545 SPXQ9BT56 116 aa12.49□□□□□ -0.41
TNFSF13-205ENST00000396545 A0A087WWL8 130 aa12.48□□□□□ -0.41
TNFSF13-205ENST00000396545 GIG44P09565 113 aaPredicted RBP12.48□□□□□ -0.41
TNFSF13-205ENST00000396545 IGLC3P0DOY3 106 aa12.48□□□□□ -0.41
TNFSF13-205ENST00000396545 C1orf158Q8N1D5 194 aa12.48□□□□□ -0.41
TNFSF13-205ENST00000396545 TCAPO15273 167 aa12.47□□□□□ -0.41
TNFSF13-205ENST00000396545 PHLDA1Q8WV24 401 aaPredicted RBP12.47□□□□□ -0.41
TNFSF13-205ENST00000396545 TRBV6-5A0A0K0K1A5 114 aa12.47□□□□□ -0.41
TNFSF13-205ENST00000396545 ZNF876PQ49A33 203 aa12.47□□□□□ -0.41
TNFSF13-205ENST00000396545 ORMDL2Q53FV1 153 aa12.47□□□□□ -0.41
TNFSF13-205ENST00000396545 C11orf72Q8NBR9 251 aa12.47□□□□□ -0.41
TNFSF13-205ENST00000396545 H0Y8G0 127 aa12.46□□□□□ -0.42
TNFSF13-205ENST00000396545 CSNK1G2-AS1Q8NCQ2 148 aa12.46□□□□□ -0.42
TNFSF13-205ENST00000396545 ST20Q9HBF5 79 aa12.46□□□□□ -0.42
TNFSF13-205ENST00000396545 UQCR10Q9UDW1 63 aa12.46□□□□□ -0.42
TNFSF13-205ENST00000396545 M0R2P5 195 aa12.45□□□□□ -0.42
TNFSF13-205ENST00000396545 ATP5LO75964 103 aa12.45□□□□□ -0.42
TNFSF13-205ENST00000396545 hDV102S1A0JD36 115 aa12.44□□□□□ -0.42
TNFSF13-205ENST00000396545 HTN1P15515 57 aa12.44□□□□□ -0.42
TNFSF13-205ENST00000396545 POLR2KP53803 58 aaKnown RBP12.44□□□□□ -0.42
TNFSF13-205ENST00000396545 MRPL52Q86TS9 123 aaKnown RBP12.44□□□□□ -0.42
TNFSF13-205ENST00000396545 TMEM263Q8WUH6 116 aaKnown RBP12.44□□□□□ -0.42
TNFSF13-205ENST00000396545 PMCHL2Q9BQD1 86 aa12.44□□□□□ -0.42
TNFSF13-205ENST00000396545 C11orf68Q9H3H3 251 aaKnown RBP12.44□□□□□ -0.42
TNFSF13-205ENST00000396545 DNAH10Q8IVF4 4471 aa12.44□□□□□ -0.42
TNFSF13-205ENST00000396545 M0QY20 66 aa12.43□□□□□ -0.42
TNFSF13-205ENST00000396545 FAM74A4Q5TZK3 123 aa12.43□□□□□ -0.42
TNFSF13-205ENST00000396545 C18orf15Q96N68 181 aa12.43□□□□□ -0.42
TNFSF13-205ENST00000396545 F5H697 171 aa12.43□□□□□ -0.42
TNFSF13-205ENST00000396545 NUDT3O95989 172 aa12.43□□□□□ -0.42
TNFSF13-205ENST00000396545 ZNF56Q15929 161 aa12.43□□□□□ -0.42
TNFSF13-205ENST00000396545 TOMM6Q96B49 74 aa12.43□□□□□ -0.42
TNFSF13-205ENST00000396545 C16orf74Q96GX8 76 aa12.43□□□□□ -0.42
TNFSF13-205ENST00000396545 SMIM9A6NGZ8 99 aa12.42□□□□□ -0.42
TNFSF13-205ENST00000396545 HSBP1L1C9JCN9 74 aa12.42□□□□□ -0.42
TNFSF13-205ENST00000396545 PRM2P04554 102 aa12.42□□□□□ -0.42
TNFSF13-205ENST00000396545 NANOS2P60321 138 aaKnown RBP12.42□□□□□ -0.42
TNFSF13-205ENST00000396545 UFSP1Q6NVU6 142 aa12.42□□□□□ -0.42
TNFSF13-205ENST00000396545 OR11H2Q8NH07 326 aa12.42□□□□□ -0.42
TNFSF13-205ENST00000396545 RNASE8Q8TDE3 154 aaKnown RBP12.42□□□□□ -0.42
TNFSF13-205ENST00000396545 HECTD4Q9Y4D8 3996 aa12.42□□□□□ -0.42
TNFSF13-205ENST00000396545 IGHV3OR16-12A0A075B7B8 117 aa12.41□□□□□ -0.42
TNFSF13-205ENST00000396545 A8MWV9 139 aa12.41□□□□□ -0.42
TNFSF13-205ENST00000396545 RRN3P1Q2M238 152 aa12.41□□□□□ -0.42
TNFSF13-205ENST00000396545 C11orf45Q8TAV5 145 aa12.41□□□□□ -0.42
TNFSF13-205ENST00000396545 TRBV27A0A0K0K1C4 114 aa12.4□□□□□ -0.42
TNFSF13-205ENST00000396545 VCYO14598 125 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms