RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 URB1-AS1Q96HZ7 61 aa14.5□□□□□ -0.09
VCPKMT-202ENST00000395860 ST20Q9HBF5 79 aa14.5□□□□□ -0.09
VCPKMT-202ENST00000395860 NIT2Q9NQR4 276 aa14.5□□□□□ -0.09
VCPKMT-202ENST00000395860 TRGV4A0A0C4DH28 118 aa14.49□□□□□ -0.09
VCPKMT-202ENST00000395860 PRSS47A8MTI9 375 aa14.49□□□□□ -0.09
VCPKMT-202ENST00000395860 HIST3H2BBQ8N257 126 aa14.49□□□□□ -0.09
VCPKMT-202ENST00000395860 C11orf68Q9H3H3 251 aaKnown RBP14.49□□□□□ -0.09
VCPKMT-202ENST00000395860 TEX48A0A1B0GUV7 120 aa14.48□□□□□ -0.09
VCPKMT-202ENST00000395860 P0DMU3 169 aa14.48□□□□□ -0.09
VCPKMT-202ENST00000395860 FAM231AP0DMU4 169 aa14.48□□□□□ -0.09
VCPKMT-202ENST00000395860 FAM231CP0DMU5 169 aa14.48□□□□□ -0.09
VCPKMT-202ENST00000395860 PMCHP20382 165 aa14.48□□□□□ -0.09
VCPKMT-202ENST00000395860 CHCHD1Q96BP2 118 aaKnown RBP14.48□□□□□ -0.09
VCPKMT-202ENST00000395860 NXT2Q9NPJ8 142 aaKnown RBP14.48□□□□□ -0.09
VCPKMT-202ENST00000395860 HSBP1O75506 76 aa14.47□□□□□ -0.09
VCPKMT-202ENST00000395860 ESDP10768 282 aa14.47□□□□□ -0.09
VCPKMT-202ENST00000395860 S100A2P29034 98 aa14.47□□□□□ -0.09
VCPKMT-202ENST00000395860 TRBV6-5A0A0K0K1A5 114 aa14.47□□□□□ -0.09
VCPKMT-202ENST00000395860 Q8N8P6 123 aa14.47□□□□□ -0.09
VCPKMT-202ENST00000395860 SMIM2Q9BVW6 85 aa14.47□□□□□ -0.09
VCPKMT-202ENST00000395860 ZMAT4Q9H898 229 aa14.47□□□□□ -0.09
VCPKMT-202ENST00000395860 DNHD1Q96M86 4753 aa14.46□□□□□ -0.09
VCPKMT-202ENST00000395860 K7EQD1 137 aa14.46□□□□□ -0.09
VCPKMT-202ENST00000395860 FHL2Q14192 279 aa14.46□□□□□ -0.09
VCPKMT-202ENST00000395860 AP5S1Q9NUS5 200 aa14.46□□□□□ -0.09
VCPKMT-202ENST00000395860 SLC25A29Q8N8R3 303 aa14.45□□□□□ -0.1
VCPKMT-202ENST00000395860 TNFRSF18Q9Y5U5 241 aa14.45□□□□□ -0.1
VCPKMT-202ENST00000395860 IGLV2-18A0A075B6J9 118 aa14.45□□□□□ -0.1
VCPKMT-202ENST00000395860 A0A0J9YWU9 116 aa14.45□□□□□ -0.1
VCPKMT-202ENST00000395860 SDHAF1A6NFY7 115 aa14.45□□□□□ -0.1
VCPKMT-202ENST00000395860 NEXN-AS1Q8NBZ9 246 aa14.45□□□□□ -0.1
VCPKMT-202ENST00000395860 TMEM70Q9BUB7 260 aa14.45□□□□□ -0.1
VCPKMT-202ENST00000395860 TRBV6-4A0A1B0GX49 114 aa14.44□□□□□ -0.1
VCPKMT-202ENST00000395860 DNAJC30Q96LL9 226 aa14.44□□□□□ -0.1
VCPKMT-202ENST00000395860 POLR2KP53803 58 aaKnown RBP14.43□□□□□ -0.1
VCPKMT-202ENST00000395860 RPL32P62910 135 aaKnown RBP14.43□□□□□ -0.1
VCPKMT-202ENST00000395860 FAM19A2Q8N3H0 131 aa14.43□□□□□ -0.1
VCPKMT-202ENST00000395860 B9D2Q9BPU9 175 aa14.43□□□□□ -0.1
VCPKMT-202ENST00000395860 Q9UF83 564 aa14.43□□□□□ -0.1
VCPKMT-202ENST00000395860 TRBV10-1A0A0K0K1A3 114 aa14.42□□□□□ -0.1
VCPKMT-202ENST00000395860 LOC105371267A0A1B0GV96 52 aa14.42□□□□□ -0.1
VCPKMT-202ENST00000395860 ATP5G1P05496 136 aa14.42□□□□□ -0.1
VCPKMT-202ENST00000395860 AMTP48728 403 aa14.42□□□□□ -0.1
VCPKMT-202ENST00000395860 TMEM18Q96B42 140 aa14.42□□□□□ -0.1
VCPKMT-202ENST00000395860 IFITM10A6NMD0 228 aa14.42□□□□□ -0.1
VCPKMT-202ENST00000395860 VCYO14598 125 aa14.42□□□□□ -0.1
VCPKMT-202ENST00000395860 PMCHL1Q16048 86 aa14.42□□□□□ -0.1
VCPKMT-202ENST00000395860 NEGR1Q7Z3B1 354 aa14.42□□□□□ -0.1
VCPKMT-202ENST00000395860 HHLA3Q9XRX5 114 aa14.42□□□□□ -0.1
VCPKMT-202ENST00000395860 LINC01546A6NGU7 62 aa14.41□□□□□ -0.1
VCPKMT-202ENST00000395860 TCAPO15273 167 aa14.41□□□□□ -0.1
VCPKMT-202ENST00000395860 FABP4P15090 132 aa14.41□□□□□ -0.1
VCPKMT-202ENST00000395860 RHOHQ15669 191 aa14.41□□□□□ -0.1
VCPKMT-202ENST00000395860 RPL36AP83881 106 aaKnown RBP14.4□□□□□ -0.1
VCPKMT-202ENST00000395860 DEFA6Q01524 100 aa14.4□□□□□ -0.1
VCPKMT-202ENST00000395860 C12orf74Q32Q52 190 aa14.4□□□□□ -0.1
VCPKMT-202ENST00000395860 ZNRF2Q8NHG8 242 aa14.4□□□□□ -0.1
VCPKMT-202ENST00000395860 RPL36ALQ969Q0 106 aaKnown RBP14.4□□□□□ -0.1
VCPKMT-202ENST00000395860 HIST1H2BLQ99880 126 aa14.4□□□□□ -0.1
VCPKMT-202ENST00000395860 PRADC1Q9BSG0 188 aa14.4□□□□□ -0.1
VCPKMT-202ENST00000395860 IGHV1-24A0A0C4DH33 117 aa14.39□□□□□ -0.11
VCPKMT-202ENST00000395860 TRBV27A0A0K0K1C4 114 aa14.39□□□□□ -0.11
VCPKMT-202ENST00000395860 KIR2DL4Q99706 377 aa14.39□□□□□ -0.11
VCPKMT-202ENST00000395860 TRBV7-3A0A075B6L6 115 aa14.39□□□□□ -0.11
VCPKMT-202ENST00000395860 I3L3M4 83 aa14.39□□□□□ -0.11
VCPKMT-202ENST00000395860 LAGE3Q14657 143 aa14.39□□□□□ -0.11
VCPKMT-202ENST00000395860 PRO0255Q9UI72 69 aa14.39□□□□□ -0.11
VCPKMT-202ENST00000395860 K7EMI3 77 aa14.38□□□□□ -0.11
VCPKMT-202ENST00000395860 HTN3P15516 51 aa14.38□□□□□ -0.11
VCPKMT-202ENST00000395860 GAGE12JA6NER3 117 aa14.37□□□□□ -0.11
VCPKMT-202ENST00000395860 CRYBA4P53673 196 aa14.37□□□□□ -0.11
VCPKMT-202ENST00000395860 GAGE1Q13065 139 aa14.37□□□□□ -0.11
VCPKMT-202ENST00000395860 GAGE4Q13068 117 aa14.37□□□□□ -0.11
VCPKMT-202ENST00000395860 GAGE5Q13069 117 aa14.37□□□□□ -0.11
VCPKMT-202ENST00000395860 GAGE13Q4V321 117 aa14.37□□□□□ -0.11
VCPKMT-202ENST00000395860 C11orf45Q8TAV5 145 aa14.37□□□□□ -0.11
VCPKMT-202ENST00000395860 DEFB104AQ8WTQ1 72 aa14.37□□□□□ -0.11
VCPKMT-202ENST00000395860 LOC100131303A0A0U1RQF7 123 aa14.37□□□□□ -0.11
VCPKMT-202ENST00000395860 F5H768 121 aa14.37□□□□□ -0.11
VCPKMT-202ENST00000395860 ORMDL2Q53FV1 153 aa14.37□□□□□ -0.11
VCPKMT-202ENST00000395860 FCER1GP30273 86 aa14.36□□□□□ -0.11
VCPKMT-202ENST00000395860 PHLDA1Q8WV24 401 aaPredicted RBP14.36□□□□□ -0.11
VCPKMT-202ENST00000395860 PACRGQ96M98 296 aaPredicted RBP14.36□□□□□ -0.11
VCPKMT-202ENST00000395860 HBDP02042 147 aa14.35□□□□□ -0.11
VCPKMT-202ENST00000395860 IGHV3-38A0A0C4DH36 116 aa14.34□□□□□ -0.11
VCPKMT-202ENST00000395860 PAX4O43316 350 aa14.34□□□□□ -0.11
VCPKMT-202ENST00000395860 NUDT3O95989 172 aa14.34□□□□□ -0.11
VCPKMT-202ENST00000395860 UBE2D3P61077 147 aa14.34□□□□□ -0.11
VCPKMT-202ENST00000395860 UBE2D2P62837 147 aa14.34□□□□□ -0.11
VCPKMT-202ENST00000395860 A0A096LNJ9 63 aa14.34□□□□□ -0.11
VCPKMT-202ENST00000395860 AKR1D1P51857 326 aa14.34□□□□□ -0.11
VCPKMT-202ENST00000395860 NANOS2P60321 138 aaKnown RBP14.34□□□□□ -0.11
VCPKMT-202ENST00000395860 Q6ZTC4 211 aa14.34□□□□□ -0.11
VCPKMT-202ENST00000395860 TENM3Q9P273 2699 aa14.34□□□□□ -0.11
VCPKMT-202ENST00000395860 TSHBP01222 138 aa14.33□□□□□ -0.12
VCPKMT-202ENST00000395860 GYPEP15421 78 aa14.33□□□□□ -0.12
VCPKMT-202ENST00000395860 BTF3P20290 206 aaKnown RBP14.33□□□□□ -0.12
VCPKMT-202ENST00000395860 OR10D4PQ8NGN7 298 aa14.33□□□□□ -0.12
VCPKMT-202ENST00000395860 A0A0J9YY99 117 aa14.32□□□□□ -0.12
VCPKMT-202ENST00000395860 LEPROTL1O95214 131 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms